Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pichia_20membranifaciens_20[genbank_20GCA_5F001950575.1_202016-12-
15] 522 sequences; 11,394,881 total letters
Query= NC_008586.1
Length=131204
Score E
Sequences producing significant alignments: (Bits) Value
seq138 156 4e-33
seq97 138 1e-27
seq468 89.7 4e-13
seq144 84.2 2e-11
>seq138
Length=17849
Score = 156 bits (172), Expect = 4e-33
Identities = 175/234 (75%), Gaps = 0/234 (0%)
Strand=Plus/Plus
Query 22213 GTAAAGATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAA 22272
|| ||||||||||||||||| || || ||||| ||||| || | || | ||||| |||
Sbjct 9495 GTCAAGATGCAAATTTTTGTCAAGACCTTAACTGGTAAGACCATTACCTTGGAAGTCGAA 9554
Query 22273 ACCACCGATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCC 22332
| | || || | || || |||| ||||| || ||||| ||||| ||||| |||||
Sbjct 9555 TCTTCTGACACTATCGATAATGTCAAGCAAAAGATCCAAGATAAGGAAGGTATCCCACCT 9614
Query 22333 GATCAACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGAT 22392
|| || ||| | ||||| |||||||| || || ||||| ||| | || | |||||
Sbjct 9615 GACCAGCAAAGACTTATTTTTGCCGGTAAGCAATTAGAAGATGGTAGAACTTTGTCCGAC 9674
Query 22393 TACAACATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGGT 22446
|||||||| ||||||||||| ||| |||| || || ||| ||||| | || |||
Sbjct 9675 TACAACATCCAAAAAGAATCAACCTTACACTTGGTCTTGAGATTGAGAGGTGGT 9728
>seq97
Length=66064
Score = 138 bits (152), Expect = 1e-27
Identities = 169/231 (73%), Gaps = 0/231 (0%)
Strand=Plus/Plus
Query 22216 AAGATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACC 22275
|||||||||||||| || ||||| | |||||||| || | || ||||| || || |
Sbjct 5243 AAGATGCAAATTTTCGTCAAAACCCTTACCGGTAAGACTATTACCCTTGAGGTTGAGTCT 5302
Query 22276 ACCGATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGAT 22335
|||| || | ||| || |||| |||||||| ||||||||||| ||||||||||| ||
Sbjct 5303 TCCGACACTATTGACAATGTCAAGCAAAAAATCCAAGACAAGGAAGGTATTCCACCTGAC 5362
Query 22336 CAACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTAC 22395
|| ||| | | || || || || || || || || ||| | || | ||||| |||
Sbjct 5363 CAGCAAAGATTGATCTTCGCTGGTAAGCAATTGGAAGATGGTAGAACTTTATCCGACTAC 5422
Query 22396 AACATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGGT 22446
||||| ||||| |||||||| | || || || || ||||| | || |||
Sbjct 5423 AACATCCAAAAGGAATCCACTTTGCACTTGGTCTTAAGATTGAGAGGTGGT 5473
>seq468
Length=160
Score = 89.7 bits (98), Expect = 4e-13
Identities = 111/152 (73%), Gaps = 0/152 (0%)
Strand=Plus/Plus
Query 22295 TCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAACAACGTCTTATATTTG 22354
|||| ||||| || || |||||||| ||||||||||| || || || | ||||| || |
Sbjct 8 TCAAGCAAAAGATCCAGGACAAGGAAGGTATTCCACCAGACCAGCAGAGACTTATTTTCG 67
Query 22355 CCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAACATTCAAAAAGAATCCA 22414
| || ||||| |||| || | ||| | || || |||||||| ||||| ||||| |
Sbjct 68 CTGGTAAACAACTAGAAGACGGAAGAACCTTGTCTGACTACAACATCCAAAAGGAATCGA 127
Query 22415 CCATACATTTAGTTTTGCGATTGCGCGGAGGT 22446
| | || || || ||| ||||| | || |||
Sbjct 128 CTTTGCACTTGGTGTTGAGATTGAGAGGTGGT 159
>seq144
Length=18003
Score = 84.2 bits (92), Expect = 2e-11
Identities = 88/116 (76%), Gaps = 0/116 (0%)
Strand=Plus/Minus
Query 22216 AAGATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACC 22275
|||||||||||||| ||||| || || |||||||| || | || ||||| || || ||
Sbjct 117 AAGATGCAAATTTTCGTTAAGACATTGACCGGTAAGACTATTACCCTTGAGGTTGAGTCC 58
Query 22276 ACCGATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACC 22331
| || || | || | |||| ||||| || || |||||||| |||||||||||
Sbjct 57 TCAGACACGATCGATAACGTCAAGCAAAAGATCCAGGACAAGGAAGGTATTCCACC 2
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 419725329742930
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |