Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pichia_20membranifaciens_20[genbank_20GCA_5F001950575.1_202016-12- 15] 522 sequences; 11,394,881 total letters Query= NC_008586.1 Length=131204 Score E Sequences producing significant alignments: (Bits) Value seq138 156 4e-33 seq97 138 1e-27 seq468 89.7 4e-13 seq144 84.2 2e-11 >seq138 Length=17849 Score = 156 bits (172), Expect = 4e-33 Identities = 175/234 (75%), Gaps = 0/234 (0%) Strand=Plus/Plus Query 22213 GTAAAGATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAA 22272 || ||||||||||||||||| || || ||||| ||||| || | || | ||||| ||| Sbjct 9495 GTCAAGATGCAAATTTTTGTCAAGACCTTAACTGGTAAGACCATTACCTTGGAAGTCGAA 9554 Query 22273 ACCACCGATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCC 22332 | | || || | || || |||| ||||| || ||||| ||||| ||||| ||||| Sbjct 9555 TCTTCTGACACTATCGATAATGTCAAGCAAAAGATCCAAGATAAGGAAGGTATCCCACCT 9614 Query 22333 GATCAACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGAT 22392 || || ||| | ||||| |||||||| || || ||||| ||| | || | ||||| Sbjct 9615 GACCAGCAAAGACTTATTTTTGCCGGTAAGCAATTAGAAGATGGTAGAACTTTGTCCGAC 9674 Query 22393 TACAACATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGGT 22446 |||||||| ||||||||||| ||| |||| || || ||| ||||| | || ||| Sbjct 9675 TACAACATCCAAAAAGAATCAACCTTACACTTGGTCTTGAGATTGAGAGGTGGT 9728 >seq97 Length=66064 Score = 138 bits (152), Expect = 1e-27 Identities = 169/231 (73%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 22216 AAGATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACC 22275 |||||||||||||| || ||||| | |||||||| || | || ||||| || || | Sbjct 5243 AAGATGCAAATTTTCGTCAAAACCCTTACCGGTAAGACTATTACCCTTGAGGTTGAGTCT 5302 Query 22276 ACCGATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGAT 22335 |||| || | ||| || |||| |||||||| ||||||||||| ||||||||||| || Sbjct 5303 TCCGACACTATTGACAATGTCAAGCAAAAAATCCAAGACAAGGAAGGTATTCCACCTGAC 5362 Query 22336 CAACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTAC 22395 || ||| | | || || || || || || || || ||| | || | ||||| ||| Sbjct 5363 CAGCAAAGATTGATCTTCGCTGGTAAGCAATTGGAAGATGGTAGAACTTTATCCGACTAC 5422 Query 22396 AACATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGGT 22446 ||||| ||||| |||||||| | || || || || ||||| | || ||| Sbjct 5423 AACATCCAAAAGGAATCCACTTTGCACTTGGTCTTAAGATTGAGAGGTGGT 5473 >seq468 Length=160 Score = 89.7 bits (98), Expect = 4e-13 Identities = 111/152 (73%), Gaps = 0/152 (0%) Strand=Plus/Plus Query 22295 TCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAACAACGTCTTATATTTG 22354 |||| ||||| || || |||||||| ||||||||||| || || || | ||||| || | Sbjct 8 TCAAGCAAAAGATCCAGGACAAGGAAGGTATTCCACCAGACCAGCAGAGACTTATTTTCG 67 Query 22355 CCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAACATTCAAAAAGAATCCA 22414 | || ||||| |||| || | ||| | || || |||||||| ||||| ||||| | Sbjct 68 CTGGTAAACAACTAGAAGACGGAAGAACCTTGTCTGACTACAACATCCAAAAGGAATCGA 127 Query 22415 CCATACATTTAGTTTTGCGATTGCGCGGAGGT 22446 | | || || || ||| ||||| | || ||| Sbjct 128 CTTTGCACTTGGTGTTGAGATTGAGAGGTGGT 159 >seq144 Length=18003 Score = 84.2 bits (92), Expect = 2e-11 Identities = 88/116 (76%), Gaps = 0/116 (0%) Strand=Plus/Minus Query 22216 AAGATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACC 22275 |||||||||||||| ||||| || || |||||||| || | || ||||| || || || Sbjct 117 AAGATGCAAATTTTCGTTAAGACATTGACCGGTAAGACTATTACCCTTGAGGTTGAGTCC 58 Query 22276 ACCGATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACC 22331 | || || | || | |||| ||||| || || |||||||| ||||||||||| Sbjct 57 TCAGACACGATCGATAACGTCAAGCAAAAGATCCAGGACAAGGAAGGTATTCCACC 2 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 419725329742930