Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pichia_20membranifaciens_20[genbank_20GCA_5F001950575.1_202016-12-
15] 522 sequences; 11,394,881 total letters
Query= NC_008724.1
Length=288047
Score E
Sequences producing significant alignments: (Bits) Value
seq138 190 4e-43
seq183 158 2e-33
seq97 158 2e-33
seq468 111 3e-19
>seq138
Length=17849
Score = 190 bits (210), Expect = 4e-43
Identities = 170/213 (80%), Gaps = 0/213 (0%)
Strand=Plus/Minus
Query 68249 CAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATC 68308
||| |||||||||| || || |||||||||||||| || ||||| | || || |||||
Sbjct 9713 CAAGACCAAGTGTAAGGTTGATTCTTTTTGGATGTTGTAGTCGGACAAAGTTCTACCATC 9654
Query 68309 TTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTC 68368
|||||| ||||| ||||| || || |||||||| ||||| ||||| || |||||||| ||
Sbjct 9653 TTCTAATTGCTTACCGGCAAAAATAAGTCTTTGCTGGTCAGGTGGGATACCTTCCTTATC 9594
Query 68369 TTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGT 68428
||| |||||| |||||| ||||| ||||| | ||||| ||||||||||| |||||
Sbjct 9593 TTGGATCTTTTGCTTGACATTATCGATAGTGTCAGAAGATTCGACTTCCAAGGTAATGGT 9534
Query 68429 TTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461
|| || || | ||||||||| || || |||||
Sbjct 9533 CTTACCAGTTAAGGTCTTGACAAAAATTTGCAT 9501
>seq183
Length=27355
Score = 158 bits (174), Expect = 2e-33
Identities = 306/444 (69%), Gaps = 16/444 (4%)
Strand=Plus/Minus
Query 9935 CATGACGCCCGCCTTCTGGTACTCCGATACCCGGCGCTCGAAGAAGTTGGACTTGCCCTC 9994
||||||||| |||||||| || || || ||||| |||||||||||||| ||||| |
Sbjct 26815 CATGACGCCGGCCTTCTGATAGTCGGAGACCCGCTTCTCGAAGAAGTTGGTTTTGCCGGC 26756
Query 9995 GAGGGAAATGAGCTCCATGAAGTCAAAGGGGTTCTCGGCGCCAAACTGCTTGGGGTAACC 10054
|| |||||| ||||||||| || || ||||| | || | |||||| | | ||
Sbjct 26755 AAGCGAAATGTTCTCCATGAAATCGAATGGGTTGGTGACGTTGTAGTGCTTGTCGCAGCC 26696
Query 10055 GAGTGCTGTGAAAATGCGGTCAGCCACGAACTCGATGTACTGGCTCATCAGGTCCGAGTT 10114
||| || || | |||||| || || ||||||| |||||||| ||||| |||| |||
Sbjct 26695 GAGGGCGACAAACAAGCGGTCGGCGACAAACTCGACGTACTGGCACATCAAGTCCTTGTT 26636
Query 10115 CATGCCAATCATGCGGCAGGGGATGGCGTCGCAAATGAAGT---CCTTTTCGTTGGCGAC 10171
|||||| | || | | ||| | |||||| | |||||| ||| ||| | | ||
Sbjct 26635 CATGCCCAACAAGTTGACGGGCAAGGCGTC---AGTGAAGTAGCGCTTCTCGATATCAAC 26579
Query 10172 CGCTTCCTCGACGATGCTCTT---TACCA-CGTCAAGGGACAGCTTGTTCTCGAGCTTCG 10227
| ||||| |||| |||| || | |||| | | | |||| | || | ||
Sbjct 26578 GG---CCTCGGTGATGATCTTGCGGACAATCGTC-TCGTCCGGGGTGTTATTCAGGTGCG 26523
Query 10228 AATACAGGAGCTCTCCAAACTGCTGGTGGAGGCCCTCGTCGCGGCTGATGAACTCGTTGG 10287
| ||| | |||| | ||| | ||||||||| || | ||| |||||||| |
Sbjct 26522 AGAACAACAAGCAGGCAAAGTCGGTGTGCAAGCCCTCGTCCCGACAGATCAACTCGTTCG 26463
Query 10288 ACAAACCCAGACCGGGCATGAGCCCCCGGTTGCGCAGCCAGAAAAT-GGCGCAGAACGAC 10346
| || || ||||||||||||||||| || || |||||| || | |||| |||||
Sbjct 26462 AGAACGTCAAGCCGGGCATGAGCCCCCGCTTCTTCAACCAGAAGATCGACGCA-AACGAG 26404
Query 10347 CCGGAGAACAGAAGACCCTCCACG 10370
|| ||||| | || |||||||||
Sbjct 26403 CCCGAGAAGAAAATCCCCTCCACG 26380
>seq97
Length=66064
Score = 158 bits (174), Expect = 2e-33
Identities = 162/212 (76%), Gaps = 0/212 (0%)
Strand=Plus/Minus
Query 68250 AATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATCT 68309
|| |||||||| | ||||| || ||||||||||| || ||||| | || || ||||||
Sbjct 5457 AAGACCAAGTGCAAAGTGGATTCCTTTTGGATGTTGTAGTCGGATAAAGTTCTACCATCT 5398
Query 68310 TCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCT 68369
|| || ||||| || ||||| || | |||||| ||||| |||||||| ||||||||||||
Sbjct 5397 TCCAATTGCTTACCAGCGAAGATCAATCTTTGCTGGTCAGGTGGAATACCTTCCTTGTCT 5338
Query 68370 TGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGTT 68429
|| || ||| |||||| || || ||||| | || || || || | ||| || ||
Sbjct 5337 TGGATTTTTTGCTTGACATTGTCAATAGTGTCGGAAGACTCAACCTCAAGGGTAATAGTC 5278
Query 68430 TTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461
|| || || ||||| |||||||| || |||||
Sbjct 5277 TTACCGGTAAGGGTTTTGACGAAAATTTGCAT 5246
>seq468
Length=160
Score = 111 bits (122), Expect = 3e-19
Identities = 108/139 (78%), Gaps = 0/139 (0%)
Strand=Plus/Minus
Query 68249 CAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATC 68308
||| |||||||| | || || || ||||||||||| || || || | || || || ||
Sbjct 144 CAACACCAAGTGCAAAGTCGATTCCTTTTGGATGTTGTAGTCAGACAAGGTTCTTCCGTC 85
Query 68309 TTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTC 68368
||||| || || || ||||| || ||||| || ||||| |||||||| |||||||||||
Sbjct 84 TTCTAGTTGTTTACCAGCGAAAATAAGTCTCTGCTGGTCTGGTGGAATACCTTCCTTGTC 25
Query 68369 TTGAATCTTTGCCTTGACG 68387
|| |||||| |||||||
Sbjct 24 CTGGATCTTTTGCTTGACG 6
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 921616386413840
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |