Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pichia_20membranifaciens_20[genbank_20GCA_5F001950575.1_202016-12- 15] 522 sequences; 11,394,881 total letters Query= NC_008724.1 Length=288047 Score E Sequences producing significant alignments: (Bits) Value seq138 190 4e-43 seq183 158 2e-33 seq97 158 2e-33 seq468 111 3e-19 >seq138 Length=17849 Score = 190 bits (210), Expect = 4e-43 Identities = 170/213 (80%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 68249 CAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATC 68308 ||| |||||||||| || || |||||||||||||| || ||||| | || || ||||| Sbjct 9713 CAAGACCAAGTGTAAGGTTGATTCTTTTTGGATGTTGTAGTCGGACAAAGTTCTACCATC 9654 Query 68309 TTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTC 68368 |||||| ||||| ||||| || || |||||||| ||||| ||||| || |||||||| || Sbjct 9653 TTCTAATTGCTTACCGGCAAAAATAAGTCTTTGCTGGTCAGGTGGGATACCTTCCTTATC 9594 Query 68369 TTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGT 68428 ||| |||||| |||||| ||||| ||||| | ||||| ||||||||||| ||||| Sbjct 9593 TTGGATCTTTTGCTTGACATTATCGATAGTGTCAGAAGATTCGACTTCCAAGGTAATGGT 9534 Query 68429 TTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 || || || | ||||||||| || || ||||| Sbjct 9533 CTTACCAGTTAAGGTCTTGACAAAAATTTGCAT 9501 >seq183 Length=27355 Score = 158 bits (174), Expect = 2e-33 Identities = 306/444 (69%), Gaps = 16/444 (4%) Strand=Plus/Minus Query 9935 CATGACGCCCGCCTTCTGGTACTCCGATACCCGGCGCTCGAAGAAGTTGGACTTGCCCTC 9994 ||||||||| |||||||| || || || ||||| |||||||||||||| ||||| | Sbjct 26815 CATGACGCCGGCCTTCTGATAGTCGGAGACCCGCTTCTCGAAGAAGTTGGTTTTGCCGGC 26756 Query 9995 GAGGGAAATGAGCTCCATGAAGTCAAAGGGGTTCTCGGCGCCAAACTGCTTGGGGTAACC 10054 || |||||| ||||||||| || || ||||| | || | |||||| | | || Sbjct 26755 AAGCGAAATGTTCTCCATGAAATCGAATGGGTTGGTGACGTTGTAGTGCTTGTCGCAGCC 26696 Query 10055 GAGTGCTGTGAAAATGCGGTCAGCCACGAACTCGATGTACTGGCTCATCAGGTCCGAGTT 10114 ||| || || | |||||| || || ||||||| |||||||| ||||| |||| ||| Sbjct 26695 GAGGGCGACAAACAAGCGGTCGGCGACAAACTCGACGTACTGGCACATCAAGTCCTTGTT 26636 Query 10115 CATGCCAATCATGCGGCAGGGGATGGCGTCGCAAATGAAGT---CCTTTTCGTTGGCGAC 10171 |||||| | || | | ||| | |||||| | |||||| ||| ||| | | || Sbjct 26635 CATGCCCAACAAGTTGACGGGCAAGGCGTC---AGTGAAGTAGCGCTTCTCGATATCAAC 26579 Query 10172 CGCTTCCTCGACGATGCTCTT---TACCA-CGTCAAGGGACAGCTTGTTCTCGAGCTTCG 10227 | ||||| |||| |||| || | |||| | | | |||| | || | || Sbjct 26578 GG---CCTCGGTGATGATCTTGCGGACAATCGTC-TCGTCCGGGGTGTTATTCAGGTGCG 26523 Query 10228 AATACAGGAGCTCTCCAAACTGCTGGTGGAGGCCCTCGTCGCGGCTGATGAACTCGTTGG 10287 | ||| | |||| | ||| | ||||||||| || | ||| |||||||| | Sbjct 26522 AGAACAACAAGCAGGCAAAGTCGGTGTGCAAGCCCTCGTCCCGACAGATCAACTCGTTCG 26463 Query 10288 ACAAACCCAGACCGGGCATGAGCCCCCGGTTGCGCAGCCAGAAAAT-GGCGCAGAACGAC 10346 | || || ||||||||||||||||| || || |||||| || | |||| ||||| Sbjct 26462 AGAACGTCAAGCCGGGCATGAGCCCCCGCTTCTTCAACCAGAAGATCGACGCA-AACGAG 26404 Query 10347 CCGGAGAACAGAAGACCCTCCACG 10370 || ||||| | || ||||||||| Sbjct 26403 CCCGAGAAGAAAATCCCCTCCACG 26380 >seq97 Length=66064 Score = 158 bits (174), Expect = 2e-33 Identities = 162/212 (76%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 68250 AATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATCT 68309 || |||||||| | ||||| || ||||||||||| || ||||| | || || |||||| Sbjct 5457 AAGACCAAGTGCAAAGTGGATTCCTTTTGGATGTTGTAGTCGGATAAAGTTCTACCATCT 5398 Query 68310 TCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCT 68369 || || ||||| || ||||| || | |||||| ||||| |||||||| |||||||||||| Sbjct 5397 TCCAATTGCTTACCAGCGAAGATCAATCTTTGCTGGTCAGGTGGAATACCTTCCTTGTCT 5338 Query 68370 TGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGTT 68429 || || ||| |||||| || || ||||| | || || || || | ||| || || Sbjct 5337 TGGATTTTTTGCTTGACATTGTCAATAGTGTCGGAAGACTCAACCTCAAGGGTAATAGTC 5278 Query 68430 TTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 || || || ||||| |||||||| || ||||| Sbjct 5277 TTACCGGTAAGGGTTTTGACGAAAATTTGCAT 5246 >seq468 Length=160 Score = 111 bits (122), Expect = 3e-19 Identities = 108/139 (78%), Gaps = 0/139 (0%) Strand=Plus/Minus Query 68249 CAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATC 68308 ||| |||||||| | || || || ||||||||||| || || || | || || || || Sbjct 144 CAACACCAAGTGCAAAGTCGATTCCTTTTGGATGTTGTAGTCAGACAAGGTTCTTCCGTC 85 Query 68309 TTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTC 68368 ||||| || || || ||||| || ||||| || ||||| |||||||| ||||||||||| Sbjct 84 TTCTAGTTGTTTACCAGCGAAAATAAGTCTCTGCTGGTCTGGTGGAATACCTTCCTTGTC 25 Query 68369 TTGAATCTTTGCCTTGACG 68387 || |||||| ||||||| Sbjct 24 CTGGATCTTTTGCTTGACG 6 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 921616386413840