Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pichia_20membranifaciens_20[genbank_20GCA_5F001950575.1_202016-12- 15] 522 sequences; 11,394,881 total letters Query= NC_009011.2 Length=131331 Score E Sequences producing significant alignments: (Bits) Value seq138 109 5e-19 seq468 84.2 2e-11 >seq138 Length=17849 Score = 109 bits (120), Expect = 5e-19 Identities = 162/230 (70%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 114153 ATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCG 114212 ||||| || | | |||||| || || |||| || ||||||||||| |||||||| ||| Sbjct 9730 ATACCACCTCTCAATCTCAAGACCAAGTGTAAGGTTGATTCTTTTTGGATGTTGTAGTCG 9671 Query 114213 CTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGA 114272 || ||| | | |||||| | ||| ||||| || | || || | || ||||| || Sbjct 9670 GACAAAGTTCTACCATCTTCTAATTGCTTACCGGCAAAAATAAGTCTTTGCTGGTCAGGT 9611 Query 114273 GGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCG 114332 || || ||||| || || |||||||| || | | || | ||||| | |||||| Sbjct 9610 GGGATACCTTCCTTATCTTGGATCTTTTGCTTGACATTATCGATAGTGTCAGAAGATTCG 9551 Query 114333 ACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382 || |||| ||| | || || || || | || || |||||||| ||||| Sbjct 9550 ACTTCCAAGGTAATGGTCTTACCAGTTAAGGTCTTGACAAAAATTTGCAT 9501 >seq468 Length=160 Score = 84.2 bits (92), Expect = 2e-11 Identities = 109/151 (72%), Gaps = 0/151 (0%) Strand=Plus/Minus Query 114154 TACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCGC 114213 |||| || | | |||||| || || || | || ||||| ||||| |||||||| || Sbjct 160 TACCACCTCTCAATCTCAACACCAAGTGCAAAGTCGATTCCTTTTGGATGTTGTAGTCAG 101 Query 114214 TCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGAG 114273 || || | ||||| ||||||||||||||| | || || | ||| ||||| || | Sbjct 100 ACAAGGTTCTTCCGTCTTCTAGTTGTTTACCAGCGAAAATAAGTCTCTGCTGGTCTGGTG 41 Query 114274 GAATGCCTTCTTTGTCGGCAATCTTTTGTTT 114304 |||| ||||| ||||| |||||||| || Sbjct 40 GAATACCTTCCTTGTCCTGGATCTTTTGCTT 10 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 420131727157464