Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pichia_20membranifaciens_20[genbank_20GCA_5F001950575.1_202016-12-
15] 522 sequences; 11,394,881 total letters
Query= NC_009127.1
Length=295146
Score E
Sequences producing significant alignments: (Bits) Value
seq183 315 1e-80
>seq183
Length=27355
Score = 315 bits (348), Expect = 1e-80
Identities = 600/877 (68%), Gaps = 30/877 (3%)
Strand=Plus/Plus
Query 42284 GATCGAGCACCAGGACATCTGGTCCATGTACAAGAAGGCGCAGTTCTCCAACTGGACCGC 42343
|||| || |||| || || ||| |||||||||||||| || ||| ||||||||
Sbjct 25939 GATCAAGTACCACGAGATATGGCAGATGTACAAGAAGGCAGAGGCCTCTTTTTGGACCGC 25998
Query 42344 CGAGGAGATTGACCTGGCCAAGGACACGGCCGGCTGG---GAGTCACTGTCTGAGAACGA 42400
||||||||| || || | |||||| | || |||| ||| || || |||||
Sbjct 25999 CGAGGAGATCGATCTCTCAAAGGACCTGCACGACTGGAACGAGAGGTTGAACGACAACGA 26058
Query 42401 AAAGTTTTTCCTCAAAAACATACTGGCCTTCTTCGCCGCCTCTGACGGCATAGTCAATGA 42460
| | ||| || | | |||| ||||| ||||| || ||||| || || || ||
Sbjct 26059 GAGATACTTCATCTCGAGAGTGTTGGCGTTCTTTGCCGCTTCGGACGGGATTGTGAACGA 26118
Query 42461 GAACCTGGCCACCAGGTTCATGAAAGAGGTGCAGTACTTTGAGGCGCGCTGCTTCTACGG 42520
|||| ||| | ||| |||||||||| ||||| || ||||||||
Sbjct 26119 GAACTTGGTGGAGAACTTCTCCGCAGAGGTGCAGGTGCCGGAGGCAAAGTGTTTCTACGG 26178
Query 42521 CTTCCAGATAGCCATAGAGAACGTGCACTCTGAGGTGTACGCCAAACTGCTCAACACGTA 42580
|||||||| || |||||| | ||||| ||| |||| | || || |||||||
Sbjct 26179 TTTCCAGATCATGATGGAGAACATCCACTCGGAGACGTACTCGTTGTTGATCGACACGTA 26238
Query 42581 CATCCTGGATCCCGTCGAGCGTAACGGG---CTGTTCAAGGCCATGGAGACGATGCCCTG 42637
| | |||||| ||| |||| | || ||||| || || || | || || ||
Sbjct 26239 CGTGAAGGATCCGAAGGAG---AACGAGTACCTCTTCAACGCGATCGATAACATCCCGTG 26295
Query 42638 CATCAAGAAGAAGGCGGACTGGGCGCTCAACTGGATCGAGAGTCCCGACGCAACGTTCGG 42697
||||||| ||||||| || |||||||||| |||||| | || || ||| ||
Sbjct 26296 CATCAAGGAGAAGGCCGAGTGGGCGCTCAGATGGATCAACGACAAGGATGCGTTGTTTGG 26355
Query 42698 CGAGAGGCTGGTAGCCTTTACCGCCGTCGAGGGCATCTTCTTCTCGGGCGCCTTCGCCTC 42757
|||| | |||| || ||| ||||||| ||||| || |||||||||||| | || || ||
Sbjct 26356 CGAGCGCTTGGTGGCGTTTGCCGCCGTGGAGGGGATTTTCTTCTCGGGCTCGTTTGCGTC 26415
Query 42758 CATCTTCTGGCTCAAGCAGAAGGTGTCGATGCCCGGACTCACCTTCTCGAACGAACTCAT 42817
||||||||| | ||| || || | |||||||| | || ||||||||||| | ||
Sbjct 26416 GATCTTCTGGTTGAAGAAGCGGGGGCTCATGCCCGGCTTGACGTTCTCGAACGAGTTGAT 26475
Query 42818 CAGCAGGGACGAGGGGCTGCATAGGGACTTTGCCTGCCTCCTGTTCTCGAGCCACCTCAG 42877
| | |||||||||| |||| | |||||||||||| | |||||||| |||||
Sbjct 26476 CTGTCGGGACGAGGGCTTGCACACCGACTTTGCCTGCTTGTTGTTCTCG---CACCT--- 26529
Query 42878 GCACAAGCCCTCGAAGGAG-CG--GGTCCGGGCCATCATCACGGAGGCCGTGGAGATCGA 42934
| | || || || | ||| || ||||| |||||||| |||||||| || |||||
Sbjct 26530 GAATAACACCCCGGACGAGACGATTGTCCGCAAGATCATCACCGAGGCCGTTGATATCGA 26589
Query 42935 GAAGGAGTTCCTCACGCAGTCGCTGCCCGTGTCCCTGGTCGGCATGAACCACGACCTCAT 42994
|||| | | |||| | | ||||||| | || | ||||||||| | ||| | ||
Sbjct 26590 GAAGCGCTACTTCACTGACGCCTTGCCCGTCAACTTGTTGGGCATGAACAAGGACTTGAT 26649
Query 42995 GTGCAAGTACATCCAGTACGTCGCCGACCATCTCCTGTGCCAGATGGGTCTCAGCCGC-- 43052
|||| ||||| || ||| |||||||||| || | || | | ||| || ||
Sbjct 26650 GTGCCAGTACGTCGAGTTTGTCGCCGACC-GCTTGTTTG-----TCGCCCTCGGCTGCGA 26703
Query 43053 ----CTCTACAACACGCCGTGCCCCTTCGACTTTATGGAGAACATCTCGTTGGAGGGCAA 43108
| ||||||| | ||| ||||| || ||||||||||| ||| | | |||||
Sbjct 26704 CAAGCACTACAACGTCACCAACCCATTCGATTTCATGGAGAACATTTCGCTTGCCGGCAA 26763
Query 43109 GACCAACTTTTTCGAGAAGCGCGTCGCCGACTACCAG 43145
|||||||| ||||||||||| ||| ||||||| |||
Sbjct 26764 AACCAACTTCTTCGAGAAGCGGGTCTCCGACTATCAG 26800
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 944333038186720
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |