Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pichia_20membranifaciens_20[genbank_20GCA_5F001950575.1_202016-12- 15] 522 sequences; 11,394,881 total letters Query= NC_009127.1 Length=295146 Score E Sequences producing significant alignments: (Bits) Value seq183 315 1e-80 >seq183 Length=27355 Score = 315 bits (348), Expect = 1e-80 Identities = 600/877 (68%), Gaps = 30/877 (3%) Strand=Plus/Plus Query 42284 GATCGAGCACCAGGACATCTGGTCCATGTACAAGAAGGCGCAGTTCTCCAACTGGACCGC 42343 |||| || |||| || || ||| |||||||||||||| || ||| |||||||| Sbjct 25939 GATCAAGTACCACGAGATATGGCAGATGTACAAGAAGGCAGAGGCCTCTTTTTGGACCGC 25998 Query 42344 CGAGGAGATTGACCTGGCCAAGGACACGGCCGGCTGG---GAGTCACTGTCTGAGAACGA 42400 ||||||||| || || | |||||| | || |||| ||| || || ||||| Sbjct 25999 CGAGGAGATCGATCTCTCAAAGGACCTGCACGACTGGAACGAGAGGTTGAACGACAACGA 26058 Query 42401 AAAGTTTTTCCTCAAAAACATACTGGCCTTCTTCGCCGCCTCTGACGGCATAGTCAATGA 42460 | | ||| || | | |||| ||||| ||||| || ||||| || || || || Sbjct 26059 GAGATACTTCATCTCGAGAGTGTTGGCGTTCTTTGCCGCTTCGGACGGGATTGTGAACGA 26118 Query 42461 GAACCTGGCCACCAGGTTCATGAAAGAGGTGCAGTACTTTGAGGCGCGCTGCTTCTACGG 42520 |||| ||| | ||| |||||||||| ||||| || |||||||| Sbjct 26119 GAACTTGGTGGAGAACTTCTCCGCAGAGGTGCAGGTGCCGGAGGCAAAGTGTTTCTACGG 26178 Query 42521 CTTCCAGATAGCCATAGAGAACGTGCACTCTGAGGTGTACGCCAAACTGCTCAACACGTA 42580 |||||||| || |||||| | ||||| ||| |||| | || || ||||||| Sbjct 26179 TTTCCAGATCATGATGGAGAACATCCACTCGGAGACGTACTCGTTGTTGATCGACACGTA 26238 Query 42581 CATCCTGGATCCCGTCGAGCGTAACGGG---CTGTTCAAGGCCATGGAGACGATGCCCTG 42637 | | |||||| ||| |||| | || ||||| || || || | || || || Sbjct 26239 CGTGAAGGATCCGAAGGAG---AACGAGTACCTCTTCAACGCGATCGATAACATCCCGTG 26295 Query 42638 CATCAAGAAGAAGGCGGACTGGGCGCTCAACTGGATCGAGAGTCCCGACGCAACGTTCGG 42697 ||||||| ||||||| || |||||||||| |||||| | || || ||| || Sbjct 26296 CATCAAGGAGAAGGCCGAGTGGGCGCTCAGATGGATCAACGACAAGGATGCGTTGTTTGG 26355 Query 42698 CGAGAGGCTGGTAGCCTTTACCGCCGTCGAGGGCATCTTCTTCTCGGGCGCCTTCGCCTC 42757 |||| | |||| || ||| ||||||| ||||| || |||||||||||| | || || || Sbjct 26356 CGAGCGCTTGGTGGCGTTTGCCGCCGTGGAGGGGATTTTCTTCTCGGGCTCGTTTGCGTC 26415 Query 42758 CATCTTCTGGCTCAAGCAGAAGGTGTCGATGCCCGGACTCACCTTCTCGAACGAACTCAT 42817 ||||||||| | ||| || || | |||||||| | || ||||||||||| | || Sbjct 26416 GATCTTCTGGTTGAAGAAGCGGGGGCTCATGCCCGGCTTGACGTTCTCGAACGAGTTGAT 26475 Query 42818 CAGCAGGGACGAGGGGCTGCATAGGGACTTTGCCTGCCTCCTGTTCTCGAGCCACCTCAG 42877 | | |||||||||| |||| | |||||||||||| | |||||||| ||||| Sbjct 26476 CTGTCGGGACGAGGGCTTGCACACCGACTTTGCCTGCTTGTTGTTCTCG---CACCT--- 26529 Query 42878 GCACAAGCCCTCGAAGGAG-CG--GGTCCGGGCCATCATCACGGAGGCCGTGGAGATCGA 42934 | | || || || | ||| || ||||| |||||||| |||||||| || ||||| Sbjct 26530 GAATAACACCCCGGACGAGACGATTGTCCGCAAGATCATCACCGAGGCCGTTGATATCGA 26589 Query 42935 GAAGGAGTTCCTCACGCAGTCGCTGCCCGTGTCCCTGGTCGGCATGAACCACGACCTCAT 42994 |||| | | |||| | | ||||||| | || | ||||||||| | ||| | || Sbjct 26590 GAAGCGCTACTTCACTGACGCCTTGCCCGTCAACTTGTTGGGCATGAACAAGGACTTGAT 26649 Query 42995 GTGCAAGTACATCCAGTACGTCGCCGACCATCTCCTGTGCCAGATGGGTCTCAGCCGC-- 43052 |||| ||||| || ||| |||||||||| || | || | | ||| || || Sbjct 26650 GTGCCAGTACGTCGAGTTTGTCGCCGACC-GCTTGTTTG-----TCGCCCTCGGCTGCGA 26703 Query 43053 ----CTCTACAACACGCCGTGCCCCTTCGACTTTATGGAGAACATCTCGTTGGAGGGCAA 43108 | ||||||| | ||| ||||| || ||||||||||| ||| | | ||||| Sbjct 26704 CAAGCACTACAACGTCACCAACCCATTCGATTTCATGGAGAACATTTCGCTTGCCGGCAA 26763 Query 43109 GACCAACTTTTTCGAGAAGCGCGTCGCCGACTACCAG 43145 |||||||| ||||||||||| ||| ||||||| ||| Sbjct 26764 AACCAACTTCTTCGAGAAGCGGGTCTCCGACTATCAG 26800 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 944333038186720