Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pichia_20membranifaciens_20[genbank_20GCA_5F001950575.1_202016-12- 15] 522 sequences; 11,394,881 total letters Query= NC_009898.1 Length=368683 Score E Sequences producing significant alignments: (Bits) Value seq69 98.7 2e-15 seq138 93.3 1e-13 >seq69 Length=248830 Score = 98.7 bits (108), Expect = 2e-15 Identities = 261/394 (66%), Gaps = 6/394 (2%) Strand=Plus/Plus Query 325342 ATCCTTACCACC--CTGCAATCTCGAACCGAACTGGCCCTCCGGCAACAACCAGTTGATG 325399 |||||||||||| |||| |||||||||||| || | || | || || | | Sbjct 239366 ATCCTTACCACCTGCTGC--TCTCGAACCGAAACCACCATGGGGGATTAAAATATTTAGG 239423 Query 325400 TTATTGCTTCCGACATAATCCTGTGCAAGGTTCACGATGG-TCCCTTGCAGAGATGCTTC 325458 |||||| || ||| |||| ||||| | | | |||| | | | || ||||| || Sbjct 239424 TTATTGGAACCAACAAAATCTTGTGCCAAGCCAATAATGGATTGCAT-CAATGATGCATC 239482 Query 325459 GCCATGGTGATAGGCGCTATGCTCTGCAACGTAACCGCTGAACTGTGCAACCTTCACGTC 325518 || |||||||| | |||| || | || |||||| ||||| | ||| || | || Sbjct 239483 ACCGTGGTGATAACCTGTATGTTCAGAAATGTAACCTTCCAACTGAGAAACTTTGATTTC 239542 Query 325519 GGTCGTCAAATTGCGCTTGAAAGCTGAATATATCACTTTCCGTTGAGAAGGTTTGAAACC 325578 | | |||| || ||||| || | ||| | | ||| | |||| ||| |||||||| Sbjct 239543 GTCCTTCAAGTTACGCTTATAACAAGCATAAAGAATTTTTCTTTGAACAGGCTTGAAACC 239602 Query 325579 ATCAACGACCGACGGAATGCTTCGTTCCAGATCGTACCGCGAGAACAAAATAAGTTCCTT 325638 ||| | ||||| |||||| || | ||| | ||||||||||||||||| || Sbjct 239603 ATCCATAACCGAAGGAATGGATCTAACATTATCCGCCATGGAGAACAAAATAAGTTCTTT 239662 Query 325639 GTCGATGAAGTCGGGAACGGGAACCTCGGGCTTCTTGTGGTCAAGTTGATTTCCTGGTTC 325698 || |||||| || | || |||| || | | | | || | | | | ||||||| Sbjct 239663 GTTGATGAATTCTGAAATTGGAATATCAGTCAAAGTTGGATCCAAATAAGTCCCTGGTTG 239722 Query 325699 GTATGCCGTCATCCACTCCTTGCGATCCTCGGCT 325732 | | || ||| ||| ||||| || || |||||| Sbjct 239723 GAAAGCTCTCAACCATTCCTTACGGTCATCGGCT 239756 >seq138 Length=17849 Score = 93.3 bits (102), Expect = 1e-13 Identities = 138/193 (72%), Gaps = 2/193 (1%) Strand=Plus/Minus Query 288282 TTCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAA 288341 |||||||||||| || ||||||| | || | || ||||||||||| || || || || Sbjct 9692 TTCTTTTTGGATGTTGTAGTCGGACAAAGTTCTACCATCTTCTAATTGCTTACCGGCAAA 9633 Query 288342 GATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGAT-TTTCGCTTTCACGT 288400 || || | || || | |||||| ||||| ||||| ||||| ||| || || || | Sbjct 9632 AATAAGTCTTTGCTGGTCAGGTGGGATACCTTCCTTATCTTGGATCTTTTGC-TTGACAT 9574 Query 288401 TTTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGA 288460 | || |||| || ||||| ||||| | || || ||||| || || | ||||||| Sbjct 9573 TATCGATAGTGTCAGAAGATTCGACTTCCAAGGTAATGGTCTTACCAGTTAAGGTCTTGA 9514 Query 288461 CGAATATCTGCAT 288473 | || || ||||| Sbjct 9513 CAAAAATTTGCAT 9501 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1179646510323916