Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pichia_20membranifaciens_20[genbank_20GCA_5F001950575.1_202016-12-
15] 522 sequences; 11,394,881 total letters
Query= NC_009898.1
Length=368683
Score E
Sequences producing significant alignments: (Bits) Value
seq69 98.7 2e-15
seq138 93.3 1e-13
>seq69
Length=248830
Score = 98.7 bits (108), Expect = 2e-15
Identities = 261/394 (66%), Gaps = 6/394 (2%)
Strand=Plus/Plus
Query 325342 ATCCTTACCACC--CTGCAATCTCGAACCGAACTGGCCCTCCGGCAACAACCAGTTGATG 325399
|||||||||||| |||| |||||||||||| || | || | || || | |
Sbjct 239366 ATCCTTACCACCTGCTGC--TCTCGAACCGAAACCACCATGGGGGATTAAAATATTTAGG 239423
Query 325400 TTATTGCTTCCGACATAATCCTGTGCAAGGTTCACGATGG-TCCCTTGCAGAGATGCTTC 325458
|||||| || ||| |||| ||||| | | | |||| | | | || ||||| ||
Sbjct 239424 TTATTGGAACCAACAAAATCTTGTGCCAAGCCAATAATGGATTGCAT-CAATGATGCATC 239482
Query 325459 GCCATGGTGATAGGCGCTATGCTCTGCAACGTAACCGCTGAACTGTGCAACCTTCACGTC 325518
|| |||||||| | |||| || | || |||||| ||||| | ||| || | ||
Sbjct 239483 ACCGTGGTGATAACCTGTATGTTCAGAAATGTAACCTTCCAACTGAGAAACTTTGATTTC 239542
Query 325519 GGTCGTCAAATTGCGCTTGAAAGCTGAATATATCACTTTCCGTTGAGAAGGTTTGAAACC 325578
| | |||| || ||||| || | ||| | | ||| | |||| ||| ||||||||
Sbjct 239543 GTCCTTCAAGTTACGCTTATAACAAGCATAAAGAATTTTTCTTTGAACAGGCTTGAAACC 239602
Query 325579 ATCAACGACCGACGGAATGCTTCGTTCCAGATCGTACCGCGAGAACAAAATAAGTTCCTT 325638
||| | ||||| |||||| || | ||| | ||||||||||||||||| ||
Sbjct 239603 ATCCATAACCGAAGGAATGGATCTAACATTATCCGCCATGGAGAACAAAATAAGTTCTTT 239662
Query 325639 GTCGATGAAGTCGGGAACGGGAACCTCGGGCTTCTTGTGGTCAAGTTGATTTCCTGGTTC 325698
|| |||||| || | || |||| || | | | | || | | | | |||||||
Sbjct 239663 GTTGATGAATTCTGAAATTGGAATATCAGTCAAAGTTGGATCCAAATAAGTCCCTGGTTG 239722
Query 325699 GTATGCCGTCATCCACTCCTTGCGATCCTCGGCT 325732
| | || ||| ||| ||||| || || ||||||
Sbjct 239723 GAAAGCTCTCAACCATTCCTTACGGTCATCGGCT 239756
>seq138
Length=17849
Score = 93.3 bits (102), Expect = 1e-13
Identities = 138/193 (72%), Gaps = 2/193 (1%)
Strand=Plus/Minus
Query 288282 TTCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAA 288341
|||||||||||| || ||||||| | || | || ||||||||||| || || || ||
Sbjct 9692 TTCTTTTTGGATGTTGTAGTCGGACAAAGTTCTACCATCTTCTAATTGCTTACCGGCAAA 9633
Query 288342 GATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGAT-TTTCGCTTTCACGT 288400
|| || | || || | |||||| ||||| ||||| ||||| ||| || || || |
Sbjct 9632 AATAAGTCTTTGCTGGTCAGGTGGGATACCTTCCTTATCTTGGATCTTTTGC-TTGACAT 9574
Query 288401 TTTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGA 288460
| || |||| || ||||| ||||| | || || ||||| || || | |||||||
Sbjct 9573 TATCGATAGTGTCAGAAGATTCGACTTCCAAGGTAATGGTCTTACCAGTTAAGGTCTTGA 9514
Query 288461 CGAATATCTGCAT 288473
| || || |||||
Sbjct 9513 CAAAAATTTGCAT 9501
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1179646510323916
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |