Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pichia_20membranifaciens_20[genbank_20GCA_5F001950575.1_202016-12- 15] 522 sequences; 11,394,881 total letters Query= NC_009899.1 Length=344691 Score E Sequences producing significant alignments: (Bits) Value seq69 102 2e-16 seq183 93.3 9e-14 >seq69 Length=248830 Score = 102 bits (112), Expect = 2e-16 Identities = 281/426 (66%), Gaps = 6/426 (1%) Strand=Plus/Plus Query 297431 AGTTTTGTGAAAATATATCGTGCACTCGCGTGATCCTTACCACC--CTGCAATCTCGAAC 297488 |||| |||||||| |||| || || |||||||||||| |||| |||||||| Sbjct 239334 AGTTCAGTGAAAATGTATCTCGCTGCGGCTGCATCCTTACCACCTGCTGC--TCTCGAAC 239391 Query 297489 CGAACTGGCCCTCCGGCAACAACCAGTTGATGTTATTGCTTCCGACATAATCCTGTGCAA 297548 |||| || | || | || || | ||||||| || ||| |||| ||||| | Sbjct 239392 CGAAACCACCATGGGGGATTAAAATATTTAGGTTATTGGAACCAACAAAATCTTGTGCCA 239451 Query 297549 GGTTCACGATGG-TCCCTTGCAGAGATGCTTCGCCATGGTGATAGGCGCTATGCTCTGCA 297607 | | |||| | | | || ||||| || || |||||||| | |||| || | | Sbjct 239452 AGCCAATAATGGATTGCAT-CAATGATGCATCACCGTGGTGATAACCTGTATGTTCAGAA 239510 Query 297608 ACGTAACCGCTGAACTGTGCAACCTTCACGTCGGTCGTCAAATTGCGCTTGAAAGCTGAA 297667 | |||||| ||||| | ||| || | ||| | |||| || ||||| || | | Sbjct 239511 ATGTAACCTTCCAACTGAGAAACTTTGATTTCGTCCTTCAAGTTACGCTTATAACAAGCA 239570 Query 297668 TATATCACTTTCCGTTGAGAAGGTTTGAAACCATCAACGACCGACGGAATGCTTCGTTCC 297727 || | | ||| | |||| ||| ||||||||||| | ||||| |||||| || | Sbjct 239571 TAAAGAATTTTTCTTTGAACAGGCTTGAAACCATCCATAACCGAAGGAATGGATCTAACA 239630 Query 297728 AGATCGTACCGCGAGAACAAAATAAGTTCCTTGTCGATGAAGTCGGGAACGGGAACCTCG 297787 ||| | ||||||||||||||||| |||| |||||| || | || |||| || Sbjct 239631 TTATCCGCCATGGAGAACAAAATAAGTTCTTTGTTGATGAATTCTGAAATTGGAATATCA 239690 Query 297788 GGCTTCTTGTGGTCAAGTTGATTTCCTGGTTCGTATGCCGTCATCCACTCCTTGCGATCC 297847 | | | | || | | | | ||||||| | | || ||| ||| ||||| || || Sbjct 239691 GTCAAAGTTGGATCCAAATAAGTCCCTGGTTGGAAAGCTCTCAACCATTCCTTACGGTCA 239750 Query 297848 TCGGCT 297853 |||||| Sbjct 239751 TCGGCT 239756 >seq183 Length=27355 Score = 93.3 bits (102), Expect = 9e-14 Identities = 167/240 (70%), Gaps = 8/240 (3%) Strand=Plus/Plus Query 243502 ATCATCACAGAAGCAGTTGAAAACGAAAAGG---AATTCATTTGCGACGCTATTCCATGC 243558 |||||||| || || ||||| | ||| ||| | |||| | ||||| | || | Sbjct 26564 ATCATCACCGAGGCCGTTGATATCGAGAAGCGCTACTTCACT---GACGCCTTGCCC-GT 26619 Query 243559 CGGCTTATTGG-CATGAACTCTGAACTCATGGGACAGTACATCGAATTCGTAGCCGACCG 243617 | ||| |||| ||||||| || | ||| | |||||| |||| || || |||||||| Sbjct 26620 CAACTTGTTGGGCATGAACAAGGACTTGATGTGCCAGTACGTCGAGTTTGTCGCCGACCG 26679 Query 243618 CATTTTCATCGCGCTTGGTTATGAGAAAGTGTACAACTCCAAGAACCCCTTTGCCTTTAT 243677 | | || |||| || || | || || |||||| || ||||| || | || || Sbjct 26680 CTTGTTTGTCGCCCTCGGCTGCGACAAGCACTACAACGTCACCAACCCATTCGATTTCAT 26739 Query 243678 GGAGCTCATTTCGCTTCAAGGGAAAACTAACTTCTTCGAAAAGCGTGTCAGTGATTATCA 243737 |||| |||||||||| || ||||| ||||||||||| ||||| ||| || ||||| Sbjct 26740 GGAGAACATTTCGCTTGCCGGCAAAACCAACTTCTTCGAGAAGCGGGTCTCCGACTATCA 26799 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1102872623800700