Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pichia_20membranifaciens_20[genbank_20GCA_5F001950575.1_202016-12- 15] 522 sequences; 11,394,881 total letters Query= NC_011345.1 Length=155122 Score E Sequences producing significant alignments: (Bits) Value seq183 158 1e-33 seq138 95.1 1e-14 seq97 93.3 4e-14 >seq183 Length=27355 Score = 158 bits (174), Expect = 1e-33 Identities = 309/452 (68%), Gaps = 11/452 (2%) Strand=Plus/Plus Query 52394 CGAGCGCATGGTGGCCTTCGCCATAGTCGAGGGCGTGtttttttCCGGCAGCTTTGCCGC 52453 ||||||| ||||||| || ||| || ||||| | || || || ||| ||||| | Sbjct 26356 CGAGCGCTTGGTGGCGTTTGCCGCCGTGGAGGGGATTTTCTTCTCGGGCTCGTTTGCGTC 26415 Query 52454 CATCTTTTACATTAAAACGAAAGGCATAATGCCCGGCCTGACGTTCAGCAACGAGTTGAT 52513 ||||| | | || | | || | ||||||||| |||||||| ||||||||||| Sbjct 26416 GATCTTCTGGTTGAAGAAGCGGGGGCTCATGCCCGGCTTGACGTTCTCGAACGAGTTGAT 26475 Query 52514 ATCGCGCGACGAAGGACTGCACACGGACTTTGCGTGCCTCTACTACAAGACGCGCGTGAC 52573 | || ||||| || ||||||| |||||||| ||| | | | | ||| | ||| Sbjct 26476 CTGTCGGGACGAGGGCTTGCACACCGACTTTGCCTGCTTGTTGTTCT---CGCACCTGAA 26532 Query 52574 CGAAAAATTGGATTCGGACACGATCCTGAGCATGTTCAAG---GAGGCGGTGGCTATCGA 52630 | | ||| || ||||| | ||| | ||| ||||| || | |||||| Sbjct 26533 TAACACCCCGGAC---GAGACGATTGTCCGCAAGATCATCACCGAGGCCGTTGATATCGA 26589 Query 52631 AAAGGAGTTTTTTACGGCCGCGCTGCCGGTCGAGCTGCTGGGCATGAACGCGCAGTCCAT 52690 ||| | || || | ||| |||| ||| | || ||||||||||| | | | || Sbjct 26590 GAAGCGCTACTTCACTGACGCCTTGCCCGTCAACTTGTTGGGCATGAACAAGGACTTGAT 26649 Query 52691 GTGCGAGTACATCGAGTTTGTGGCGGATCGTCTGTTGGTGCAGCTCGGGCAGCCA-AAGT 52749 |||| ||||| |||||||||| || || || |||| || ||||| | || | ||| Sbjct 26650 GTGCCAGTACGTCGAGTTTGTCGCCGACCGCTTGTTTGTCGCCCTCGG-CTGCGACAAGC 26708 Query 52750 ACTTCAACGCTCGCAATCCGTTTGAGTTTATGAACAACATTTCGCTTGAGGGCAAGACCA 52809 ||| ||||| ||| || || || || ||| | ||||||||||||| ||||| |||| Sbjct 26709 ACTACAACGTCACCAACCCATTCGATTTCATGGAGAACATTTCGCTTGCCGGCAAAACCA 26768 Query 52810 ACTTTTTCGAGAAGCGAGTCGGCGAGTATAAG 52841 |||| ||||||||||| ||| ||| ||| || Sbjct 26769 ACTTCTTCGAGAAGCGGGTCTCCGACTATCAG 26800 >seq138 Length=17849 Score = 95.1 bits (104), Expect = 1e-14 Identities = 157/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447 || |||| ||| | ||| || || |||| | |||| || ||||| |||||||||||| | Sbjct 9727 CCACCTCTCAATCTCAAGACCAAGTGTAAGGTTGATTCTTTTTGGATGTTGTAGTCGGAC 9668 Query 138448 ATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGT 138507 | ||| | || || | ||| ||||||| | | || || | || ||||| || || Sbjct 9667 AAAGTTCTACCATCTTCTAATTGCTTACCGGCAAAAATAAGTCTTTGCTGGTCAGGTGGG 9608 Query 138508 ATACCTTCTTTGTCGGTGATTTTTTGTTTTAATTGTTCCACGGTGTCGGTCGACTCCACC 138567 |||||||| || || ||| ||||| || | | || | ||||| | || || || Sbjct 9607 ATACCTTCCTTATCTTGGATCTTTTGCTTGACATTATCGATAGTGTCAGAAGATTCGACT 9548 Query 138568 TCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614 || | || | || |||||||| | || || |||||||| ||||| Sbjct 9547 TCCAAGGTAATGGTCTTACCAGTTAAGGTCTTGACAAAAATTTGCAT 9501 >seq97 Length=66064 Score = 93.3 bits (102), Expect = 4e-14 Identities = 159/228 (70%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447 || |||| ||| | || || || || | | || |||||||| |||||||||||| Sbjct 5472 CCACCTCTCAATCTTAAGACCAAGTGCAAAGTGGATTCCTTTTGGATGTTGTAGTCGGAT 5413 Query 138448 ATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGT 138507 | ||| | || || | ||| ||||| | |||| | | || ||||| || || Sbjct 5412 AAAGTTCTACCATCTTCCAATTGCTTACCAGCGAAGATCAATCTTTGCTGGTCAGGTGGA 5353 Query 138508 ATACCTTCTTTGTCGGTGATTTTTTGTTTTA-ATTGTTCCACGGTGTCGGTCGACTCCAC 138566 |||||||| ||||| ||||||||| || | |||| || | ||||||| ||||| || Sbjct 5352 ATACCTTCCTTGTCTTGGATTTTTTGCTTGACATTG-TCAATAGTGTCGGAAGACTCAAC 5294 Query 138567 CTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614 ||| | || | || ||||| || || ||||| || ||||| ||||| Sbjct 5293 CTCAAGGGTAATAGTCTTACCGGTAAGGGTTTTGACGAAAATTTGCAT 5246 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 496259161887840