Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pichia_20membranifaciens_20[genbank_20GCA_5F001950575.1_202016-12- 15] 522 sequences; 11,394,881 total letters Query= NC_011423.1 Length=111724 Score E Sequences producing significant alignments: (Bits) Value seq97 131 1e-25 seq138 118 8e-22 seq468 87.8 1e-12 >seq97 Length=66064 Score = 131 bits (144), Expect = 1e-25 Identities = 167/230 (73%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 14950 CCACCTCGCAATCTTAAAACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTG 15009 ||||||| ||||||||| || || || | || || || ||||| |||||||| ||| Sbjct 5472 CCACCTCTCAATCTTAAGACCAAGTGCAAAGTGGATTCCTTTTGGATGTTGTAGTCGGAT 5413 Query 15010 AGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGA 15069 | | |||| | ||||| ||||| || |||||| | ||||| | || ||||| |||| Sbjct 5412 AAAGTTCTACCATCTTCCAATTGCTTACCAGCGAAGATCAATCTTTGCTGGTCAGGTGGA 5353 Query 15070 ATTCCTTCCTTGTCACAAATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTACG 15129 || ||||||||||| ||||| || ||| | || ||||| ||| | || || Sbjct 5352 ATACCTTCCTTGTCTTGGATTTTTTGCTTGACATTGTCAATAGTGTCGGAAGACTCAACC 5293 Query 15130 TCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCATATT 15179 || | |||||| || ||||| || || ||||| || ||||||||||| || Sbjct 5292 TCAAGGGTAATAGTCTTACCGGTAAGGGTTTTGACGAAAATTTGCATCTT 5243 >seq138 Length=17849 Score = 118 bits (130), Expect = 8e-22 Identities = 174/244 (71%), Gaps = 7/244 (3%) Strand=Plus/Minus Query 14950 CCACCTCGCAATCTTAAAACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTG 15009 ||||||| |||||| || || || || | ||| || |||||||| |||||||| ||| Sbjct 9727 CCACCTCTCAATCTCAAGACCAAGTGTAAGGTTGATTCTTTTTGGATGTTGTAGTCGGAC 9668 Query 15010 AGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGA 15069 | | |||| | ||||||||||| || || || | || | | || ||||| ||| Sbjct 9667 AAAGTTCTACCATCTTCTAATTGCTTACCGGCAAAAATAAGTCTTTGCTGGTCAGGTGGG 9608 Query 15070 ATTCCTTCCTTGTCACAAAT--TTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTA 15127 || |||||||| || || ||||||| ||| | || ||||| || | ||| | Sbjct 9607 ATACCTTCCTTATCTTGGATCTTTTGCTTG--ACATTATCGATAGTGTCAGAAGATTCGA 9550 Query 15128 CGTCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCATATT---TGAAA 15184 | || ||||||||||| ||||| || | || || |||||||||||||| || || || Sbjct 9549 CTTCCAAGGTAATGGTCTTACCAGTTAAGGTCTTGACAAAAATTTGCATCTTGACTGTAA 9490 Query 15185 TAAA 15188 |||| Sbjct 9489 TAAA 9486 >seq468 Length=160 Score = 87.8 bits (96), Expect = 1e-12 Identities = 102/136 (75%), Gaps = 4/136 (3%) Strand=Plus/Minus Query 14950 CCACCTCGCAATCTTAAAACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTG 15009 ||||||| |||||| || || || || | || || || ||||| |||||||| || | Sbjct 158 CCACCTCTCAATCTCAACACCAAGTGCAAAGTCGATTCCTTTTGGATGTTGTAGTCA--G 101 Query 15010 AGAA--TTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTG 15067 | || |||| ||||||||| |||||| |||||| | || | | ||| ||||| || Sbjct 100 ACAAGGTTCTTCCGTCTTCTAGTTGTTTACCAGCGAAAATAAGTCTCTGCTGGTCTGGTG 41 Query 15068 GAATTCCTTCCTTGTC 15083 |||| ||||||||||| Sbjct 40 GAATACCTTCCTTGTC 25 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 357389726316770