Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pichia_20membranifaciens_20[genbank_20GCA_5F001950575.1_202016-12- 15] 522 sequences; 11,394,881 total letters Query= NC_013288.1 Length=191761 Score E Sequences producing significant alignments: (Bits) Value seq95 259 6e-64 seq183 134 2e-26 >seq95 Length=34527 Score = 259 bits (286), Expect = 6e-64 Identities = 1125/1756 (64%), Gaps = 45/1756 (3%) Strand=Plus/Minus Query 115557 TCGGAGGTAGTACATCCCCGTCTTGAGCCCCTGCTTCCAGGCATACATATGCATTGAGGA 115616 || |||||||||||| || ||||| | ||||| |||||| | || | ||||| |||| Sbjct 2561 TCTGAGGTAGTACATACCTGTCTTCAACCCCTTCTTCCAACCGTAGAAGTGCATCGAGGT 2502 Query 115617 CAACTTGGAGAGTGTTGGACTTTCCATGAAGAGGTTCATACTTTGGGATTGATCGATGAA 115676 ||||||| | ||||| | | || | || |||||| || || || |||||| | Sbjct 2501 CAACTTGCCCATGGTTGGGTTCTTCAAGTGGATGTTCATGGACTGAGACTGGTCGATGTA 2442 Query 115677 GCGTCCCCGATCCGCCGCCATATCAATCACATCCTTCATCTTGATTTCCCACACAGTTCT 115736 || | || |||||||| || || | ||||| ||| ||||| || || | Sbjct 2441 CGCACCTCTGTCAGCCGCCATGTCGATGATCGCCTTCTGTGGGATCTCCCAGACGGTCTT 2382 Query 115737 GTAGAGGTTCTTAATATCATCTGGGATATCCACGATATTTTGGATAGAGCCACCTGCCTT 115796 || | || ||| || || | |||||| | | || ||||| || || | Sbjct 2381 ATACAAGTCCTTGATTTCCTGTGGGATGTTTGGAAGGTTCTGGATGGAACCGTTGTCGGA 2322 Query 115797 GACCATGAGATCCTTCATA---TCCTTTGACCAGAGACCAATCTTCTTGAGATC-CTCCA 115852 || ||| | | ||||||| || || ||| || || |||| | | || ||| | Sbjct 2321 GATGATGTGGTTCTTCATAGAGTCGTT---CCATAGTCCCATCTCCACCAAGTCTCTCAA 2265 Query 115853 CGAGGTGCTTATTGACAACAACAAACTCACCCGCGAGGGTGCGTCTCAGA-TAGATGTTG 115911 | | || || |||| |||||||| || | | ||| ||| |||||||| Sbjct 2264 C-ATGTATGGGTTCACAATCTGGAACTCACCGGCCAAAACTCTTCT-AGAGTAGATGTTC 2207 Query 115912 GTCGTGTATGGCTCAAAGCACTCATTGTTACCCAAGATTTGGGCTGTGGAGGCTGTGGGC 115971 | ||||||||||| || || || |||| ||| | || || | ||||| || || ||| Sbjct 2206 GAGGTGTATGGCTCGAAACATTCGTTGTAACCAAGAATCTGCGAGGTGGAAGCAGTTGGC 2147 Query 115972 ATGGGTGCCATGAGAAGGCTGTTGCGGAGACCCACCCCCCTAATGCGTTCCTTGAGGGCG 116031 || || || | | | ||| | | || | || || ||||| |||| Sbjct 2146 ATTGGGGCAACCAACAAAGAGTTTCTCAACCCGTGGGCTCTGATCTTCTCCTTCAGGGAA 2087 Query 116032 TCCCAGTCGTAGTTGAGCTTTGTCTCCCCCTCCCACATATCAAACTGGAGGATACCTTGG 116091 |||||||| | | | | || | |||| | || |||||||| | |||||| Sbjct 2086 TCCCAGTCCCATAAGTCGGTAGGCTTCTTACCCCAGAGGTCGAACTGGAGCACACCTTGC 2027 Query 116092 GACGCTGGCGATCCCTCAAATGTCTCATATGGGCCCTCAACCTCCGCCAATTCGGAGCTC 116151 || ||||| || |||||| | ||||| || || ||||| ||||| ||| | | Sbjct 2026 GATGCTGGTGAGCCCTCATAGGTCTCGTAGGGACCCTCCTTGATTGCCAACTCGACGGAC 1967 Query 116152 GCCTCGAGGGCTGCGTGATACATTGTCTCAAAAATGCGAGCATTCATTGCCTTGGCCTCG 116211 || || || || || || || ||||| || ||||| | |||| |||| ||||| Sbjct 1966 GCTTCAAGTGCAGCATGGTAGATTGTTTCGAAAATTTGGATGTTCAACTCCTTTGCCTCT 1907 Query 116212 TCGGAATCAAACGCGAGACGGCACAAAATAAATACATCCGCGAGACCTTGGACACCGAGG 116271 || || || | || | | | || || | || || | |||||||||||| | Sbjct 1906 GGAGAGTCGAAAGGCAGTCTGAGGAGCATGAAAGCGTCGGCCAAACCTTGGACACCAACA 1847 Query 116272 CCAATTGGGCGATGTCTCATATTAGACTTTCGAGCGGTCTCC---ACGGGATAAAAATTC 116328 |||| || | | |||||| ||||| | || || |||| || ||||| |||| Sbjct 1846 GCAATCGGTCTGTTTCTCATGTTAGATCTCCGTGC---CTCCGGAACAGGATAGTAATTG 1790 Query 116329 CTATCGATAACCCTATTTAGATTTTTGGTGACAACCTTTGTGATTTCATGAAGCTTTTCG 116388 |||||| | | || | || |||| |||||||| | ||| || || | || || Sbjct 1789 ACATCGATGATTTTGTTCAAGTTCTTGGCAACAACCTTGGCGATCTCGTGCAATTTCTCA 1730 Query 116389 TAATCAAAACTGCGAGTCT---CTTCATT---GACATACTTAGGAAGGGCGATTGACGCC 116442 | | | | | ||| | | ||| | |||| | ||| | || | || ||| Sbjct 1729 AAGTTGTACCAGGAAGTGTGATCGTCACTCTCGACAAAGGCAGGCAACGCAACCGAAGCC 1670 Query 116443 AGATTACACACAGAGGTCTCATCCTTATCAGTGTACTCTATAATTTCCGTACACAAATTT 116502 | ||||| |||| | ||||| || || || || | ||| || |||||| || Sbjct 1669 AAGTTACAGACAGCGACTTCATCGTTCGAAGAATATTCGACAATCTCACAACACAAGTTG 1610 Query 116503 GAACTCTTAATGGTGCCCAAGTTCTTTTGATTTGACTTTGTGTTACACGCATCCTTGTAG 116562 ||| || || | |||||||||| ||| || || ||||||||||| || ||||||||| Sbjct 1609 GAAGATTTGATCATACCCAAGTTCTGTTGGTTGGATTTTGTGTTACATGCGTCCTTGTAG 1550 Query 116563 AGCATATATGGCGTCCCCGTCTCCGTTTGGGACTTGAGAATAGCCTTCCATA-CATCGGC 116621 ||||| | || || ||||| || ||||||| | | || | | ||| | | | | Sbjct 1549 AGCATGAAAGGAGTACCCGTTTCAGTTTGGGCTTCCAAGATCGAGTACCACAACTTTTGT 1490 Query 116622 GGCTGGCACAGTGGCGTTGGCTCGCCCC---TCCTCCT-CGTACTTTGTGTAGAGGGCCT 116677 | || | ||| || || | | | ||| | |||| ||||| || || | | Sbjct 1489 GCCTTGA----TGGTCTTT-CTACCTCTGTTTTCTCTTTCGTATTTTGTATATAGCTCTT 1435 Query 116678 CAAACTCTTCACCCACAGCCTCTGAGAGCCCTGGTGCCTTATCTGGACAGAAGAGAGACC 116737 | ||||| ||||| | || || | ||||| ||| | ||| |||| |||| || Sbjct 1434 CGAACTCGTCACCGTAGACGTCGGACAAGCCTGGGACCTCACTTGGGGAGAAAAGAGTCC 1375 Query 116738 ATTGACCACCCTCCTCAACCCGCTTCATGAAGAGGTCTGGGATCCAGAGCGCCGAGAAGA 116797 ||| | || |||||| | ||||||||| | ||| || ||||| | || | ||| | Sbjct 1374 ATTCCTGATTCTGCTCAACTCTCTTCATGAACAAGTCAGGTATCCACAATGCAGGGAACA 1315 Query 116798 GATCCC-GACAGCGAGCTTCTTCATCCCCCTGATTGAGACGCAACTCCAAAAAGTCCATG 116856 || | | | || |||||| | || || || | || || | ||||| | | Sbjct 1314 AGTCTCTGGCTCTGAT-TTCTTCCTTACCGTGGTTCTTTCTCACGTCGATGAAGTCGAAG 1256 Query 116857 ATATCCGCGTGCCACGGTTCCAGGTACACCGCGATTGACCC----CTTGCGACGACCAGC 116912 ||||| | |||||| || || || || | ||| | | || ||| | |||| | Sbjct 1255 ATATCGGAGTGCCATGGCTCAAGATAGAGCGCAAAGGCACCTGGTCTTTTGTT-ACCACC 1197 Query 116913 CTGGTTTACATACCTCGCCGTTGCGTTAAATACGCGAAGCATTGGAATGATACCATCAGA 116972 |||| ||||| || ||||| ||| || || || | ||||||||||||||| | || Sbjct 1196 TTGGTCGACATATCTGGCCGTGTTGTTGAAAACACGCATCATTGGAATGATACCGTTGGA 1137 Query 116973 TTGGCCATTTGTCCCCCGAAT--ACGAGACTTGTTGGCTCTGACATCGTGGATGTGCATA 117030 || || || || ||| | ||| || ||||||||| | ||||||||||| | Sbjct 1136 AGTACCGTTGGTACCTGCAATGTAGGAGCCTG--TGGCTCTGATGTTGTGGATGTGCAAA 1079 Query 117031 CCAATACCCCCTGCCCACTTTGAGATTTGTGCGCACTCCGTGAGACTGCCGTAGATCCCA 117090 |||||||| ||||| ||| ||||| | || |||| | | | || ||||||| || Sbjct 1078 CCAATACCACCTGCGGTCTTGGAGATCAGCGCACACTGTTTCAAAGTGTCGTAGATACCC 1019 Query 117091 TCGATCGAGTCACCCTTATTTGCGATGAGGAAGCAGCTCGACATTTGTGGCCTTGGTGTA 117150 || ||||| ||| | | |||||| | ||| ||| ||||| || ||||| ||| Sbjct 1018 TCAATCGAATCATCTTGCATTGCGACCAAGAAACAGGAGGACATCTGGTTTCTTGGGGTA 959 Query 117151 CCAGCGTTGAAGAGGGTTGGTGTCGCGTGGATGAACATACCT-TGGGACATCTTATCGTA 117209 || |||||||| | ||| || | ||||| |||| || || | |||||| | ||| Sbjct 958 CCTGCGTTGAACAAGGTAGGAGAAGCGTGAGTGAAG-TATCTCTTAGACATCAAGTTGTA 900 Query 117210 GGTCTCCAAGACAGAGGGAATGTCTTCCCCGTGAATACCGATTGAGACCCGCATAAACAT 117269 |||||| | | | |||||| || ||||||||||||| | ||| | ||| | || Sbjct 899 GGTCTCGATGGCGCTCTCAATGTCGTCGCCGTGAATACCGACAGCGACTCTCATGATCAA 840 Query 117270 GTATTGGGGTGTTTCC 117285 || |||||| ||||| Sbjct 839 GTGCTGGGGTCTTTCC 824 >seq183 Length=27355 Score = 134 bits (148), Expect = 2e-26 Identities = 351/526 (67%), Gaps = 17/526 (3%) Strand=Plus/Minus Query 127520 GCAAACTCTTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACCT 127579 ||||| || ||| | |||||||| || |||| | || |||||||| || || Sbjct 26508 GCAAAGTCGGTGTGCAAGCCCTCGTCCCGACAGATCAACTCGTTCGAGAACGTCAAGCCG 26449 Query 127580 GGCATGAGACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGATC 127639 |||||||| |||||||||||||||||||| |||| ||| ||||| |||||||| ||| Sbjct 26448 GGCATGAGCCCCCGCTTCTTCAACCAGAAGATCGACGCAAACGAGCCCGAGAAGAAAATC 26389 Query 127640 CCCTCCACACACGCGAACGCAAATAGACGCTCGGCAAAGGAGCGGGACTTTGT-ATCAAA 127698 |||||||| || ||||| | | |||||| |||| | || | |||| | | Sbjct 26388 CCCTCCACGGCGGCAAACGCCACCAAGCGCTCGCCAAA-CAACGCATCCTTGTCGTTGAT 26330 Query 127699 CCACTTCATCGCCCACTGTGCCTTTTTCTCGATACATGGGACGGTCTGGATCGCTTCAAA 127758 ||| | | |||||||| ||||| | || ||| || |||| | | | |||||| | || Sbjct 26329 CCATCTGAGCGCCCACTCGGCCTTCTCCTTGATGCACGGGATGTTATCGATCGCGTTGAA 26270 Query 127759 GAGTTCCTTCTTTTCTGATGGATCTTTGATGTACTTATCTATGAGTTTTGAATATGTTTC 127818 ||| | || || || ||||| || | |||| | || || | || || || || Sbjct 26269 GAGGTACTCGTTCTCCTTCGGATCCTTCACGTACGTGTCGATCAACAACGAGTACGTCTC 26210 Query 127819 GCCGTGGACCAT-TTCATTATGGCACTGATACGCGTAGAAAGAGCGCGCTTCGCTTATCT 127877 ||||| | | ||| || | ||| | |||||||| | || || | || Sbjct 26209 CGAGTGGATGTTCTCCATCAT-GATCTGGAAACCGTAGAAACACTTTGCCTCCGGCACCT 26151 Query 127878 GTACCTCATCGGCAAAATTGTTATTGATATTCTCAAAAACAATTCCATCGGACCCAGCAA 127937 | ||||| ||| || || | | ||||| ||||| || || || | |||| Sbjct 26150 GCACCTCTGCGGAGAAGTTCTCCACCAAGTTCTCGTTCACAATCCCGTCCGAAGCGGCAA 26091 Query 127938 AAAACGCCAGGATATACTTT----ATGAA-TTTCTGTTCATTCTCGTTCAGGGTC---TT 127989 | ||||||| | ||| | ||||| | ||| || || ||||||| || || Sbjct 26090 AGAACGCCA----ACACTCTCGAGATGAAGTATCT-CTCGTTGTCGTTCAACCTCTCGTT 26036 Query 127990 CCAGTCGTCGAGATCCTTTGAGAGATCTACCTCCTCCGCAGTCCAA 128035 |||||||| || |||||||||||||| | |||||| || |||||| Sbjct 26035 CCAGTCGTGCAGGTCCTTTGAGAGATCGATCTCCTCGGCGGTCCAA 25990 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 613503196865520