Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pichia_20membranifaciens_20[genbank_20GCA_5F001950575.1_202016-12- 15] 522 sequences; 11,394,881 total letters Query= NC_013668.3 Length=248526 Score E Sequences producing significant alignments: (Bits) Value seq183 219 7e-52 seq95 113 7e-20 >seq183 Length=27355 Score = 219 bits (242), Expect = 7e-52 Identities = 572/860 (67%), Gaps = 17/860 (2%) Strand=Plus/Minus Query 159649 CTTCTCGAAAAAGTTGGTCTTGCCCTCCATGGATATTGATTCCATGAACCCGAATGGGTT 159708 ||||||||| |||||||| ||||| | | || || |||||||| |||||||||| Sbjct 26782 CTTCTCGAAGAAGTTGGTTTTGCCGGCAAGCGAAATGTTCTCCATGAAATCGAATGGGTT 26723 Query 159709 CTTCACGTGATAGCGCTTCGGAAATCCGAGAGCCGCCAGCAACCTGTCTGCCACAAATTC 159768 | |||| ||| |||| | ||||| || | | ||| | ||| || ||||| || Sbjct 26722 GGTGACGTTGTAGTGCTTGTCGCAGCCGAGGGCGACAAACAAGCGGTCGGCGACAAACTC 26663 Query 159769 GATGTAGCTACACATCTGCTCACAGTTGATCCCCAGCAGCCTAACGGGGAGCGCTTCCGA 159828 || ||| |||||| || ||| || |||| || | ||||| | || || | Sbjct 26662 GACGTACTGGCACATCAAGTCCTTGTTCATGCCCAACAAGTTGACGGGCAAGGCGTCAGT 26603 Query 159829 CAGAAACTCCTTCTCAATCTCGACCGCTTCGGTCACAATCT-GCGAGACA--CGT-TCGT 159884 | | |||||| || || || || ||||| | |||| ||| |||| ||| |||| Sbjct 26602 GAAGTAGCGCTTCTCGATATCAACGGCCTCGGTGATGATCTTGCG-GACAATCGTCTCGT 26544 Query 159885 ACCCCGGCTTGCCCAAAATGTGGTCCTTAAACAGGAGGCACGCAAAGTCGCAGTGCAGTC 159944 |||| || | | ||| | |||| | ||| ||||||||| ||||| | Sbjct 26543 ---CCGGGGTGTT---ATTCAGGTGCGAGAACAACAAGCAGGCAAAGTCGGTGTGCAAGC 26490 Query 159945 CCTCGTCCCGAGAGATGAACTCGTTGGACATGATGAGGCCCGGCATGATCCCACGCGGTT 160004 ||||||||||| |||| |||||||| || | | | ||| ||||||| ||| ||| | Sbjct 26489 CCTCGTCCCGACAGATCAACTCGTTCGAGAACGTCAAGCCGGGCATGAGCCCCCGCTTCT 26430 Query 160005 TGAGCCAAAAAATGGCCGCAAA--AGCACCGCTAAAAAAGATCCCCTCCACGGCCGCAAA 160062 | | ||| || || | |||||| ||| ||| || ||| |||||||||||||| ||||| Sbjct 26429 TCAACCAGAAGATCGACGCAAACGAGC-CCGAGAAGAAA-ATCCCCTCCACGGCGGCAAA 26372 Query 160063 CGCCACGAGCCTCTCACCAAAAGAGGCGTTGGTGTCATGGGTCCACCTTTTGGCCCATTC 160122 |||||| | | ||| ||||| | || | |||| | | |||| || ||||| || Sbjct 26371 CGCCACCAAGCGCTCGCCAAACAACGCATCCTTGTCGTTGATCCATCTGAGCGCCCACTC 26312 Query 160123 AGCCTTCTTTGCGATGCACGGCATGCGCTCGACGGCGTTAAACAATCTGTCCTGCTCCTT 160182 ||||||| ||||||||| ||| |||| ||||| || | || | |||||| Sbjct 26311 GGCCTTCTCCTTGATGCACGGGATGTTATCGATCGCGTTGAAGAGGTACTCGTTCTCCTT 26252 Query 160183 CACATCCTTGATCAGAGTAGCAATCAGCTTCGAGTACATTTCTGCGTGCACATTTTCGAT 160242 | |||||| | || | |||| | ||||||| | || | ||| | || || || Sbjct 26251 CGGATCCTTCACGTACGTGTCGATCAACAACGAGTACGTCTCCGAGTGGATGTTCTCCAT 26192 Query 160243 GGCCATCTGAAAGTTGTAGAAATATGTCGCCTCCAGATACTGCACCTCCTGTGTGAACCT 160302 ||||| || ||||||| | | |||||| | ||||||||| | ||| | Sbjct 26191 CATGATCTGGAAACCGTAGAAACACTTTGCCTCCGGCACCTGCACCTCTGCGGAGAAGTT 26132 Query 160303 TTGACCCAGATTGGCATTAACCAACCCGTCGGCGGCCGCAAAGAAAGCCAACACGTGAGA 160362 | ||| || | || || | |||||| | || |||||||| |||||||| || Sbjct 26131 CTCCACCAAGTTCTCGTTCACAATCCCGTCCGAAGCGGCAAAGAACGCCAACACTCTCGA 26072 Query 160363 GATGAAATGTCTCTCGTCTTTGTTGAGTCTCTTTTCCCAGT-GTGTCACGTCTTGGGCCA 160421 |||||| | |||||||| | ||| | |||| | ||||| ||| || ||| | | | Sbjct 26071 GATGAAGTATCTCTCGTTGTCGTTCAACCTCTCGTTCCAGTCGTG-CAGGTCCTTTGAGA 26013 Query 160422 AATCAACCTCTTCCGCGCTCCAATTGGCAGCCTGAGCAGTTTTGTACATGGCCCAGATGG 160481 ||| | ||| || ||| ||||| | |||| || | |||||||| ||| || Sbjct 26012 GATCGATCTCCTCGGCGGTCCAAAAAGAGGCCTCTGCCTTCTTGTACATCTGCCATATCT 25953 Query 160482 CGTGCTCTCTGATCGGAAAA 160501 |||| | ||||||| ||| Sbjct 25952 CGTGGTACTTGATCGGGAAA 25933 >seq95 Length=34527 Score = 113 bits (124), Expect = 7e-20 Identities = 412/639 (64%), Gaps = 12/639 (2%) Strand=Plus/Minus Query 205061 TCGTATTTTGTGTACAGCGCCACAAAGTCAGAACCGTACACGTC-CATCAGCCCTGGACA 205119 ||||||||||| || ||| | | || || |||||| ||||| | |||| |||| Sbjct 1456 TCGTATTTTGTATATAGCTCTTCGAACTCGTCACCGTAGACGTCGGACAAGCCTGGGACC 1397 Query 205120 TTTTTTGGGACACATCAGAGACCACATCTGATCGTCTTTCACCCTCTCCATAAACAGGTC 205179 | ||||| | | |||| ||| ||||| | | || |||| ||| |||| ||| Sbjct 1396 TCACTTGGG-GAGAAAAGAGTCCATTCCTGATTCTGCTCAACTCTCTTCATGAACAAGTC 1338 Query 205180 GCTGATCCACAGGCCGTAAAACAGATCACGGGCCCTAATTCCGTCGTCTCCAAGGTTCTT 205239 ||||||| | |||| || | ||| || ||| | || | || ||||||| Sbjct 1337 AGGTATCCACAATGCAGGGAACAAGTCTCTGGCTCTGATTTCTTCCTTACCGTGGTTCTT 1278 Query 205240 TTTCAAGTCCAGCCAAGCCGCA-ATGTCGGCGTGCCACGGCTCTAACCACACGGCCATTG 205298 | ||| ||| | ||| || | || |||| |||||| ||||| | | | || | | Sbjct 1277 TCTCACGTCGA-TGAAGTCGAAGATATCGGAGTGCCATGGCTCAAGATAGAGCGCAAAGG 1219 Query 205299 CGCCTGGCCTCTTGTTCCCACCCTGGTCCACCATGCGAGTCATCGCGTTGAAAACTCGCA 205358 | ||||| || ||||| ||||| ||||| || | | | | ||||||||| |||| Sbjct 1218 CACCTGGTCTTTTGTTACCACCTTGGTCGACATATCTGGCCGTGTTGTTGAAAACACGCA 1159 Query 205359 GCATCGGCACCAGACCGTTGGCGGTCCCGTTCGTGCTGTTGATGGCCGAGCCTTCAGCCC 205418 ||| || | | |||||||| || ||||| || | ||| |||||| || | Sbjct 1158 TCATTGGAATGATACCGTTGGAAGTACCGTTGGTACCTGCAATGTAGGAGCCTGTGGCTC 1099 Query 205419 TCACGTTGGAGATGGCCGCGCCAATCCCGCCAGAACACTTGGCGATCTGGGCGCACTCTT 205478 | | |||| |||| | ||||| || || | ||||| |||| | || |||| || Sbjct 1098 TGATGTTGTGGATGTGCAAACCAATACCACCTGCGGTCTTGGAGATCAGCGCACACTGTT 1039 Query 205479 GCAGAGTGCTGTAGATGCCTGCGATGGAATCGTCCGCCAGTGTCACCAGATAGCACGAAG 205538 || |||| |||||| || | || ||||| || || || |||| | || || | Sbjct 1038 TCAAAGTGTCGTAGATACCCTCAATCGAATCATCTTGCATTGCGACCAAGAAACAGGAGG 979 Query 205539 CCAGCTTGGCAAAGTTGGTGCCCGCGTGGAAGAGCGTGGGGCTGGCGTGGCTGAAGCGCT 205598 || || | ||| || |||| ||| | || || ||||| ||||| Sbjct 978 ACATCTGGTTTCTTGGGGTACCTGCGTTGAACAAGGTAGGAGAAGCGTGAGTGAAG---- 923 Query 205599 TCTCGCTCAAACACC----TGTAGGTCTCCAGCACGCTCTCCAGATCGAAGCCGTGAATA 205654 | || || | ||| | |||||||||| | ||||||| | ||| |||||||||| Sbjct 922 TATCTCTTAGACATCAAGTTGTAGGTCTCGATGGCGCTCTCAATGTCGTCGCCGTGAATA 863 Query 205655 CCTATGGCGATCCTCATGAAGAGGTGTTGAGGTCTCTCC 205693 || | |||| ||||||| | ||| || ||||| ||| Sbjct 862 CCGACAGCGACTCTCATGATCAAGTGCTGGGGTCTTTCC 824 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 795150011612320