Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pichia_20membranifaciens_20[genbank_20GCA_5F001950575.1_202016-12- 15] 522 sequences; 11,394,881 total letters Query= NC_013953.1 Length=156344 Score E Sequences producing significant alignments: (Bits) Value seq183 360 2e-94 seq468 100 3e-16 seq97 91.5 1e-13 >seq183 Length=27355 Score = 360 bits (398), Expect = 2e-94 Identities = 647/940 (69%), Gaps = 14/940 (1%) Strand=Plus/Minus Query 132576 GTCGTCCTTGGCAAACATCACGCCAAATTTTTGATATTCGCCCACCTTTTTCTCaaaaaa 132635 ||| | |||||| ||| ||||| || ||||| ||| ||| ||||| || || Sbjct 26827 GTCCTTCTTGGC---CATGACGCCGGCCTTCTGATAGTCGGAGACCCGCTTCTCGAAGAA 26771 Query 132636 aTTAGTTTTTCCCTCCAAGGAAATGAGCGTCATAAAATCCAAGGGGTTGGCTGTGTTGTA 132695 || ||||| || | | |||||| | ||| ||||| || ||||||| |||||| Sbjct 26770 GTTGGTTTTGCCGGCAAGCGAAATGTTCTCCATGAAATCGAATGGGTTGGTGACGTTGTA 26711 Query 132696 GTGCTTGGTGCCGATCAGGTCGACGAGCAGCCTGTCGGCCACGAACTCGATGTATTGCGA 132755 ||||||| || | ||| |||| | || | |||||| || ||||||| ||| || | Sbjct 26710 GTGCTTGTCGCAGCCGAGGGCGACAAACAAGCGGTCGGCGACAAACTCGACGTACTGGCA 26651 Query 132756 CATGGTTTCGCAATTAAGTCCCAGCAGACGCACCGGCAGCGCTTCGGTGAGAAAGCGTTG 132815 ||| || || | |||| || || |||| || || |||| |||| | Sbjct 26650 CATCAAGTCCTTGTTCATGCCCAACAAGTTGACGGGCAAGGCGTCAGTGAAGTAGCGCTT 26591 Query 132816 CTCGATGGCGACCGCGTCGGTGACGATTTCCCTAACGCGCGCCGCGCTCGGCCGTTGCAC 132875 |||||| | || || ||||||| ||| | | || || | || ||| | Sbjct 26590 CTCGATATCAACGGCCTCGGTGATGATCTTGCGGACAATCGTCTCGTCCGGGGTGTTATT 26531 Query 132876 CAAATGCTTGAACATCAAGCAAGCAAAGTCGCAATGCAAGCCCTCGTCCCTGGAAATGAG 132935 || ||| ||||| |||||| ||||||||| |||||||||||||||| | || | Sbjct 26530 CAGGTGCGAGAACAACAAGCAGGCAAAGTCGGTGTGCAAGCCCTCGTCCCGACAGATCAA 26471 Query 132936 TTCGTTGCTGAAAGTCAAGCCGGGCATGAGGCCGCGTTTTTTGAGCCAAAATATGGCGGC 132995 ||||| ||| ||||||||||||||||| || || || || | ||| || || | || Sbjct 26470 CTCGTTCGAGAACGTCAAGCCGGGCATGAGCCCCCGCTTCTTCAACCAGAAGATCGACGC 26411 Query 132996 GAAACTGCCCGAAAAGAAGACGCCCTCGACGGCCGCGAAAGCCACCAGGCGCTCGCCGAA 133055 || |||||| ||||| | ||||| ||||| || || ||||||| ||||||||| || Sbjct 26410 AAACGAGCCCGAGAAGAAAATCCCCTCCACGGCGGCAAACGCCACCAAGCGCTCGCCAAA 26351 Query 133056 CGTGGCTTCTTTGCTGGCGATCCAGCGCAGCGCCCATTCGGCCTTTTCTTTGACGCACGG 133115 | || || ||| | |||||| | |||||||| |||||||| || |||| |||||| Sbjct 26350 CAACGCATCCTTGTCGTTGATCCATCTGAGCGCCCACTCGGCCTTCTCCTTGATGCACGG 26291 Query 133116 CATCGTTTCGATGGCGTTCAACAAACGGAGT--TTCTCTTCCGAGGAAC--GCACGTAGG 133171 || | ||||| ||||| | | | | | | ||||| | | ||| | |||||| | Sbjct 26290 GATGTTATCGATCGCGTTGA--AGAGGTACTCGTTCTCCTTC--GGATCCTTCACGTACG 26235 Query 133172 TGTCGATGAGGGTCGAATACATTTCCGAGTGTACGTTCTCCATGGCGATTTGAAAGCCGT 133231 ||||||| | ||| ||| | |||||||| | ||||||||| ||| || || |||| Sbjct 26234 TGTCGATCAACAACGAGTACGTCTCCGAGTGGATGTTCTCCATCATGATCTGGAAACCGT 26175 Query 133232 AAAAGCACCGCGCCTCGACCACCTGCACTTCTTGAGCGAAACGCTCGACCAGATTTTCGT 133291 | || ||| ||||| ||||||||| ||| | ||| ||| |||| || |||| Sbjct 26174 AGAAACACTTTGCCTCCGGCACCTGCACCTCTGCGGAGAAGTTCTCCACCAAGTTCTCGT 26115 Query 133292 TGACGATGCCGTCGCTGGCGGCGAAAAAGGCCAGCACGTGCTTGATGAAATGGCGCTCGT 133351 | || || ||||| ||||| || || |||| ||| | |||||| | | ||||| Sbjct 26114 TCACAATCCCGTCCGAAGCGGCAAAGAACGCCAACACTCTCGAGATGAAGTATCTCTCGT 26055 Query 133352 TGTCGTTCAAGCGCTC---CCAGTCGCGCGTGTCCTTGGACAGGTCCACCTCCTCGACGG 133408 |||||||||| | ||| ||||||| || |||||| || || || | ||||||| ||| Sbjct 26054 TGTCGTTCAACCTCTCGTTCCAGTCGTGCAGGTCCTTTGAGAGATCGATCTCCTCGGCGG 25995 Query 133409 TCCAAAACGACGCCTCGGCTTTTTTGTACATACTCCACATGTCCGAATATTGTATGGGAA 133468 ||||||| || ||||| || || |||||||| ||| || || || | || || | Sbjct 25994 TCCAAAAAGAGGCCTCTGCCTTCTTGTACATCTGCCATATCTCGTGGTACTTGATCGGGA 25935 Query 133469 AAATCACAAACCGGCGGGGGTTTTCGCGCAACAGCGGCTC 133508 ||| ||||||||| | ||| || |||||||||||| Sbjct 25934 AAAGCACAAACCGTCTCTTGTTCTCAACCAACAGCGGCTC 25895 >seq468 Length=160 Score = 100 bits (110), Expect = 3e-16 Identities = 109/145 (75%), Gaps = 0/145 (0%) Strand=Plus/Plus Query 38326 AAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAACAGCGGCTCATTTACGCGGGCA 38385 |||| |||| ||||| || || ||||| | ||||| ||| | || |||| ||| || | Sbjct 14 AAAAGATCCAGGACAAGGAAGGTATTCCACCAGACCAGCAGAGACTTATTTTCGCTGGTA 73 Query 38386 AACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAAAAGGAAGCGACGCTGC 38445 |||| || || |||| | ||| | ||||||||||||||||||||| |||| ||| Sbjct 74 AACAACTAGAAGACGGAAGAACCTTGTCTGACTACAACATCCAAAAGGAATCGACTTTGC 133 Query 38446 ATTTGGTGCTGCGTTTGAGAGGCGG 38470 | |||||| || | |||||||| || Sbjct 134 ACTTGGTGTTGAGATTGAGAGGTGG 158 >seq97 Length=66064 Score = 91.5 bits (100), Expect = 1e-13 Identities = 158/230 (69%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 38241 AAAATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCC 38300 || |||||||| ||||| ||||| || || || || || || ||| | || || ||| | Sbjct 5243 AAGATGCAAATTTTCGTCAAAACCCTTACCGGTAAGACTATTACCCTTGAGGTTGAGTCT 5302 Query 38301 ACCGACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGAC 38360 |||||| | | | | || ||||||||| ||||| || || ||||| | ||| Sbjct 5303 TCCGACACTATTGACAATGTCAAGCAAAAAATCCAAGACAAGGAAGGTATTCCACCTGAC 5362 Query 38361 CAACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTAC 38420 || || | | || | ||| || || || |||| || | | || | ||||||| Sbjct 5363 CAGCAAAGATTGATCTTCGCTGGTAAGCAATTGGAAGATGGTAGAACTTTATCCGACTAC 5422 Query 38421 AACATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGG 38470 ||||||||||||||| | || |||| ||||| | | |||||||| || Sbjct 5423 AACATCCAAAAGGAATCCACTTTGCACTTGGTCTTAAGATTGAGAGGTGG 5472 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 500169536372480