Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pichia_20membranifaciens_20[genbank_20GCA_5F001950575.1_202016-12- 15] 522 sequences; 11,394,881 total letters Query= NC_014637.1 Length=617453 Score E Sequences producing significant alignments: (Bits) Value seq120 187 1e-41 seq12 167 9e-36 seq138 120 1e-21 seq73 116 1e-20 seq134 111 6e-19 seq20 84.2 9e-11 >seq120 Length=74726 Score = 187 bits (206), Expect = 1e-41 Identities = 404/600 (67%), Gaps = 6/600 (1%) Strand=Plus/Minus Query 451895 GATGAAATTGTGCTTGTAGGAGGTTCTACACGAATTCCTAAAATTCAAGATATGTTGTCT 451954 |||||||| || ||||| || ||||| || ||||||| || | ||| | | | || Sbjct 3704 GATGAAATCGTCCTTGTTGGTGGTTCCACCAGAATTCCAAAGGTCCAAAAGTTAGTTTCC 3645 Query 451955 TCTTATTTTGGAGGAAAACAACTATGTAAGAGCGTAAATCCTGATGAAGCTGTTGCATAT 452014 || || || || ||| | ||| | | || || |||||||||||||| || Sbjct 3644 GACTACTTCAACGGTAAGGAACCAAACAAGTCCATCAACCCAGATGAAGCTGTTGCTTAC 3585 Query 452015 GGTGCTGCAGTTCAAGCAGCTATTCTAACAGGTT-CAGATGATGAAAAATTAGGAGATAT 452073 |||||||| || ||||| || || | || ||| | || | || | ||| | Sbjct 3584 GGTGCTGCTGTCCAAGCTGCCATCTTGACTGGTGACCAATCCTCCAAGACCCA-AGACTT 3526 Query 452074 TCTGTTAGTAGATGTAACACCTCTATCTCTTGGAGTTGAAACAGCTGGTGGAATGATGAC 452133 | ||| | ||||| || || |||||||||| ||||||| |||||||| | ||||| Sbjct 3525 GTTATTATTGGATGTTACTCCATTATCTCTTGGTATTGAAACCGCTGGTGGTGTCATGAC 3466 Query 452134 TAATTTAATTAAACGAGGAACTTC--TATTCCTTGTAAAAAGAGTCAAACATTTAGTACA 452191 || || ||| | || |||| | ||| || ||||| ||| | | || || |||| Sbjct 3465 CAAGTTGATTCCAAGA--AACTCCACTATCCCATGTAAGAAGTCTGAGACTTTCTCTACA 3408 Query 452192 GCAAGTGATAACCAACCAGGTGTAACTATTCAAGTGTTTGAAGGAGAACGTGCAATGACA 452251 ||| |||||||||||||| || ||||| |||||||| ||| | |||| ||| Sbjct 3407 TACGCTGACAACCAACCAGGTGTCTTGATCCAAGTCTTTGAAGGTGAAAGAGCAAGAACA 3348 Query 452252 CGAGATAATAATAAACTAGGAGAATTTACTCTTTCAAACATTCCTCCTATGCCAAGGGGA 452311 || || || | || | ||| | || ||||||||| ||||| || Sbjct 3347 AAGGACAACAACTTGTTGGGTAAGTTTGAATTATCTGGCATTCCTCCAGCACCAAGAGGT 3288 Query 452312 ACTCCTCAAATTGAAATTACCTATGATGTTGATGCAAATGGTATTCTTAATGTGAGTGCA 452371 ||| ||||||||| | |||| ||| | ||||| ||||||||||| ||||| ||| Sbjct 3287 GTTCCACAAATTGAAGTCACCTTCGATATCGATGCCAATGGTATTCTGAATGTTTCTGCC 3228 Query 452372 GTTGAAAAATCATCTGGAAAATCAGAAAAAATTACAATTACTAATGATAAAAACCGTTTA 452431 | ||||| |||| || | |||| ||||| || || || || || | ||| Sbjct 3227 CTCGAAAAGGGTACTGGTAAGACTCAAAAGATTACCATCACCAACGACAAGGGTAGATTA 3168 Query 452432 TCTAAAGAAGATATTGAAAAAATGGTAGATGAAGCAGAAAAATTCAAGGATGATGATGAA 452491 ||| |||||||||| |||| |||||| |||||| ||||| |||||||| || |||||| Sbjct 3167 TCTCAAGAAGATATCGAAAGAATGGTTTCTGAAGCTGAAAAGTTCAAGGAGGAAGATGAA 3108 >seq12 Length=164003 Score = 167 bits (184), Expect = 9e-36 Identities = 405/606 (67%), Gaps = 12/606 (2%) Strand=Plus/Minus Query 451892 ATTGATGAAATTGTGCTTGTAGGAGGTTCTACACGAATTCCTAAAATTCAAGATATGTTG 451951 ||||| |||||||| ||||| || |||||||| ||||||| || | ||| | |||| Sbjct 73897 ATTGAAGAAATTGTTCTTGTTGGTGGTTCTACCAGAATTCCAAAGGTGCAAAA---GTTG 73841 Query 451952 TCTTCTTATTT--TGGA-GGAAAACAACTATGTAAGAGCGTAAATCCTGATGAAGCTGTT 452008 ||| | || | | || || ||| | ||| | | || || |||||||| ||| Sbjct 73840 GTTTCGGACTTCTTCAACGGTAAGGAACCAAACAAGTCCATCAACCCAGATGAAGCCGTT 73781 Query 452009 GCATATGGTGCTGCAGTTCAAGCAGCTATTCTAACAGGTT-CAGATGATGAAAAATTAGG 452067 || || ||||| || || ||||| || || |||| ||| | || || || | | Sbjct 73780 GCTTACGGTGCAGCCGTCCAAGCTGCCATCTTAACTGGTGACCAATCATCCAAGACTCA- 73722 Query 452068 AGATATTCTGTTAGTAGATGTAACACCTCTATCTCTTGGAGTTGAAACAGCTGGTGGAAT 452127 ||| | | ||| | ||||| || || |||| | || |||| || |||||||| | Sbjct 73721 AGACTTGTTATTATTGGATGTTACCCCATTATCCTTAGGTATTGAGACCGCTGGTGGTGT 73662 Query 452128 GATGACTAATTTAATTAAACGAGGAACTTC--TATTCCTTGTAAAAAGAGTCAAACATTT 452185 ||||| || || ||| | || |||| | |||||| ||||| ||| | |||| || Sbjct 73661 CATGACCAAGTTGATTCCAAGA--AACTCCACTATTCCATGTAAGAAGTCTGAAACTTTC 73604 Query 452186 AGTACAGCAAGTGATAACCAACCAGGTGTAACTATTCAAGTGTTTGAAGGAGAACGTGCA 452245 || |||||||||||||||||| |||||||| |||||||| ||| | ||| Sbjct 73603 TCAACTTATGCTGATAACCAACCAGGTGTCTTGATTCAAGTCTTTGAAGGTGAAAGAGCA 73544 Query 452246 ATGACACGAGATAATAATAAACTAGGAGAATTTACTCTTTCAAACATTCCTCCTATGCCA 452305 | ||| || || || | || | ||| | || |||||| ||| ||| Sbjct 73543 AAGACGAAGGACAACAACTTGTTGGGTAAGTTTGAATTATCCGGCATTCCACCTGCTCCA 73484 Query 452306 AGGGGAACTCCTCAAATTGAAATTACCTATGATGTTGATGCAAATGGTATTCTTAATGTG 452365 || || || ||||| ||| | || | ||| ||||||| |||||||| ||||| || Sbjct 73483 AGAGGTGTCCCACAAATCGAAGTCACTTTCGATATTGATGCCAATGGTATCCTTAACGTT 73424 Query 452366 AGTGCAGTTGAAAAATCATCTGGAAAATCAGAAAAAATTACAATTACTAATGATAAAAAC 452425 ||| ||||||| |||| || | |||| ||||| || || || || || Sbjct 73423 TCTGCCCTTGAAAAGGGTACTGGTAAGACTCAAAAGATTACCATCACAAACGACAAGGGT 73364 Query 452426 CGTTTATCTAAAGAAGATATTGAAAAAATGGTAGATGAAGCAGAAAAATTCAAGGATGAT 452485 | || || || || || || |||| |||||| |||||| ||||| |||||||| || Sbjct 73363 AGATTGTCCAAGGAGGACATCGAAAGAATGGTCTCTGAAGCTGAAAAGTTCAAGGAAGAA 73304 Query 452486 GATGAA 452491 |||||| Sbjct 73303 GATGAA 73298 >seq138 Length=17849 Score = 120 bits (132), Expect = 1e-21 Identities = 161/224 (72%), Gaps = 0/224 (0%) Strand=Plus/Plus Query 391050 ATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATCT 391109 ||| | ||||| || || || | |||||||| || ||||| | || || ||||| ||| Sbjct 9501 ATGCAAATTTTTGTCAAGACCTTAACTGGTAAGACCATTACCTTGGAAGTCGAATCTTCT 9560 Query 391110 GATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCAA 391169 || | || || | | || ||||| || |||||||||||||| || || ||||| || Sbjct 9561 GACACTATCGATAATGTCAAGCAAAAGATCCAAGATAAGGAAGGTATCCCACCTGACCAG 9620 Query 391170 CAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAAT 391229 ||| | | ||||| | || || ||| | |||||||| ||||||||| | || || || Sbjct 9621 CAAAGACTTATTTTTGCCGGTAAGCAATTAGAAGATGGTAGAACTTTGTCCGACTACAAC 9680 Query 391230 ATTGATAAGGATGCAACACTTCACTTAGTATTAAGACTGAGAGG 391273 || | || || |||| | ||||| || || ||| ||||||| Sbjct 9681 ATCCAAAAAGAATCAACCTTACACTTGGTCTTGAGATTGAGAGG 9724 >seq73 Length=82005 Score = 116 bits (128), Expect = 1e-20 Identities = 202/291 (69%), Gaps = 6/291 (2%) Strand=Plus/Minus Query 451313 GTTACTGATGCAGTAATTACTGTTCCCGCTTATTTCAATGATGCACAACGGCAAGCAACT 451372 || ||| |||| || | |||||||| ||||| ||||| ||||| ||| | ||||||||| Sbjct 62413 GTCACTCATGCTGTTGTCACTGTTCCAGCTTACTTCAACGATGCTCAAAGACAAGCAACT 62354 Query 451373 AAAGATGCAGGACATATTGCTGGTTTAAATGTTCTTCGAATTATTAATGAACCTACAGCA 451432 |||||||| || ||||| ||| | | |||| | ||||| | || || || || || Sbjct 62353 AAAGATGCTGGTACCATTGCGGGTCTGACTGTTTTGAGAATTGTGAACGAGCCAACTGCC 62294 Query 451433 GCTGCTCTAGCATATGGACTAGGAAAATCAAAAGAAACAGAAGaaaaaaaTATTTTAGTA 451492 || || | || || || || ||| ||| | || |||||||| | ||| | || Sbjct 62293 GCAGCAATTGCCTACGG-CTTGGA----CAAGGGTGAC-GAAGAAAAGCAAATTATTGTC 62240 Query 451493 TTTGATTTTGGTGGAGGAACTCATGATACTTCTGTACTTTCAATTGAAGATGGGGTATTT 451552 | || || ||||| || ||| ||| || || | || |||| || ||| | |||| Sbjct 62239 TACGACTTGGGTGGTGGTACTTTCGATGTCTCCTTATTGTCGATTGCAGGTGGTGCATTT 62180 Query 451553 GAAGTAAAGGCAACCAATGGTGATACTCATCTAGGAGGTGAAGATATTGAT 451603 ||||| |||||| ||||| ||||| | || ||||||||| | ||| Sbjct 62179 GAAGTGTTAGCAACCTCCGGTGACACTCACTTGGGTGGTGAAGATTTCGAT 62129 >seq134 Length=89545 Score = 111 bits (122), Expect = 6e-19 Identities = 259/387 (67%), Gaps = 8/387 (2%) Strand=Plus/Plus Query 451222 AGGTGAAACTAAAACTTTTGCTCCTGAAGAAATTTCATCTATGGTTCTTACTAAAATGAA 451281 ||||||| || ||||| | || ||||||| || || ||||| | || || ||||| Sbjct 43964 AGGTGAAGAAAAGACTTTCTCCCCACAAGAAATCTCCTCCATGGTCTTGACCAAGATGAA 44023 Query 451282 AGAAACAGCAGAACAATATATTGGTTCTCCAGTTACTGATGCAGTAATTACTGTTCCCGC 451341 |||| || ||| | | || | ||| | | || || | |||||||| || Sbjct 44024 GGAAATTGCTGAAGCTAAACTAGGCCAAACTGTTGATAAGGCTGTTGTCACTGTTCCAGC 44083 Query 451342 TTATTTCAATGATGCACAACGGCAAGCAACTAAAGATGCAGGACATATTGCTGGTTTAAA 451401 ||||||||||||||| ||| | ||||| || || ||||| || ||||| ||||| || Sbjct 44084 TTATTTCAATGATGCCCAAAGACAAGCCACCAAGGATGCTGGTTCCATTGCAGGTTTGAA 44143 Query 451402 TGTTCTTCGAATTATTAATGAACCTACAGCAGCTGCTCTAGCATATGGACTAGGAAAATC 451461 ||| | |||| || || ||||| || || ||||| | || || || |||| | Sbjct 44144 CGTTTTGAGAATCATCAACGAACCAACCGCTGCTGCCATTGCTTACGGTTTAGGTGCAGG 44203 Query 451462 AAAA---GAAACAGAAGaaaaaaaTATTTTAGTATTTGATTTTGGTGGAGGAACTCATGA 451518 ||| ||||| |||||| | ||||| | || || || ||||| || ||| || Sbjct 44204 TAAATCCGAAAC---CGAAAAACACATTTTGATTTTCGACTTGGGTGGTGGTACTTTCGA 44260 Query 451519 TACTTCTGTACTTTCA-ATTGAAGATGGGGTATTTGAAGTAAAGGCAACCAATGGTGATA 451577 | ||| | ||| | |||| | ||| || || || ||||| ||| |||||| | Sbjct 44261 TGTCTCTCT-CTTAAACATTGCTGGTGGTGTTTTCACCGTCAAGGCTACCTCTGGTGACA 44319 Query 451578 CTCATCTAGGAGGTGAAGATATTGATA 451604 |||| | || ||| ||||| | |||| Sbjct 44320 CTCACTTGGGTGGTCAAGATTTCGATA 44346 >seq20 Length=113228 Score = 84.2 bits (92), Expect = 9e-11 Identities = 144/209 (69%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 412279 ACACCCTTTTTTCCAAAACGACCACTTCTACCAATTCTATGTATAAAAGTTTCATGATTT 412338 ||||||||| | |||||||| || | |||||||||||| ||| || |||| | | Sbjct 33442 ACACCCTTTCTACCAAAACGGCCTGAACGACCAATTCTATGAATATAATTTTCCCGGTCA 33501 Query 412339 TTAGGTAAATCATAATTTATAACTAATTTAACCTCAGGAATATCTATCCCCCGTGCTAAT 412398 | ||||||||||||||||| || | || | ||| ||| ||||| | ||| | Sbjct 33502 GTTGGTAAATCATAATTTATCACAAGAGACACTTGCTGAACATCAATCCCTCTTGCCCAG 33561 Query 412399 AAATCAGTTGTTAATAAAATTCGTGTTTTTCCCTCTCTAAATTCATCTACAATTTTACTT 412458 | ||| || | || | | ||||| || ||| ||| ||||||| | |||||| | Sbjct 33562 ACATCTGTAGATACGAGGACTCGTGAATTACCCAATCTGAATTCATTCATGATTTTATCT 33621 Query 412459 CTTTCTTCTTGTTCTAAACCTCCATGAAT 412487 || || ||||||| | ||||||| || Sbjct 33622 CTCTCATCTTGTTTCATGTCTCCATGCAT 33650 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1975705186148376