Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pichia_20membranifaciens_20[genbank_20GCA_5F001950575.1_202016-12- 15] 522 sequences; 11,394,881 total letters Query= NC_014789.1 Length=184409 Score E Sequences producing significant alignments: (Bits) Value seq95 293 3e-74 seq30 91.5 2e-13 >seq95 Length=34527 Score = 293 bits (324), Expect = 3e-74 Identities = 1174/1819 (65%), Gaps = 51/1819 (3%) Strand=Plus/Minus Query 105589 TCGGAGATAGTACATCCCGGTCTTGAGTCCTTGTTTCCACGCGTACATATGCATAGAAGA 105648 || ||| |||||||| || ||||| | || | ||||| |||| | ||||| || | Sbjct 2561 TCTGAGGTAGTACATACCTGTCTTCAACCCCTTCTTCCAACCGTAGAAGTGCATCGAGGT 2502 Query 105649 GAGCTTGGACATCGTTGGACTTTCCATGAAAAGATTCATACTTTGACTCTGGTCAATGAA 105708 | |||| ||| ||||| | | || | | ||||| ||| |||||| ||| | Sbjct 2501 CAACTTGCCCATGGTTGGGTTCTTCAAGTGGATGTTCATGGACTGAGACTGGTCGATGTA 2442 Query 105709 GCGACCACGTTGTGCCGCCATATCAATGACATCCTTCATCTTGATTTCCCACACTGTGCG 105768 ||| | | |||||||| || |||| ||||| ||| ||||| || || Sbjct 2441 CGCACCTCTGTCAGCCGCCATGTCGATGATCGCCTTCTGTGGGATCTCCCAGACGGTCTT 2382 Query 105769 GTAGAGATTCTTGATATCATCTGGGATATCTGAGATATTTTGAATTGAACCCCCCGCCTT 105828 || | | |||||| || | |||||| | || | || || || ||||| | Sbjct 2381 ATACAAGTCCTTGATTTCCTGTGGGATGTTTGGAAGGTTCTGGATGGAACCGTTGTCGGA 2322 Query 105829 GACCATGAGATCCTTCATATCCTTGGACCAAAGACCAATCTTCTTGAGATCATTGACGAG 105888 || ||| | | ||||||| | | ||| || || |||| | | || | | | Sbjct 2321 GATGATGTGGTTCTTCATAGAGTCGTTCCATAGTCCCATCTCCACCAAGTCTCTCA--AC 2264 Query 105889 ATGCTTG--TTGACAATCACAAACTCTCCCGCGAGGGTTCTTCTCAGA-TAGATGTTCGT 105945 ||| || || |||||| ||||| || || | |||||| ||| |||||||||| Sbjct 2263 ATGTATGGGTTCACAATCTGGAACTCACCGGCCAAAACTCTTCT-AGAGTAGATGTTCGA 2205 Query 105946 CGTGTAGGGTTCAAAGCATTCATTATTACCCAAGATTTGTGCGGTGGAGGCTGTTGGCAT 106005 ||||| || || || ||||| || | ||| | || || | |||||| || |||||||| Sbjct 2204 GGTGTATGGCTCGAAACATTCGTTGTAACCAAGAATCTGCGAGGTGGAAGCAGTTGGCAT 2145 Query 106006 TGGTGCCATCAAAAGACTGTTACGAAGACCCTTTTCCT-TGATGCGTTCCTTGAGAACAT 106064 ||| || | ||| | | ||| | | |||| | || |||| ||||| || || Sbjct 2144 TGGGGCAACCAACAAAGAGTTTCTCA-ACCCGTGGGCTCTGATCTTCTCCTTCAGGGAAT 2086 Query 106065 CCCAGTCGTAGTTGA-GCTTGGTTTCACCTTCCCACATA--TCAAATTGAAGCACCCCTT 106121 ||||||| | | | | || ||| || || || | || || || ||||| |||| Sbjct 2085 CCCAGTCCCATAAGTCGGTAGGCTTC---TTACCCCAGAGGTCGAACTGGAGCACACCTT 2029 Query 106122 GGGACGTGGGAGAACCCTCAAATGTCTCATAGGAACCTTGGGCTTCA--GCCAATTCACA 106179 | || | || || |||||| | ||||| |||| ||| | ||| | ||||| || Sbjct 2028 GCGATGCTGGTGAGCCCTCATAGGTCTCGTAGGGACCCTC--CTTGATTGCCAACTCGAC 1971 Query 106180 GCTCGCCTCCAGGGATGCGTGATACATGGTTTCAAAGATACGAGCATTCATCTCCTTGGC 106239 | ||| || || | || || || || ||||| || || | |||| |||||| || Sbjct 1970 GGACGCTTCAAGTGCAGCATGGTAGATTGTTTCGAAAATTTGGATGTTCAACTCCTTTGC 1911 Query 106240 TTCATCTGAATCAAATGCGTAG-CGGCACAAAATAAATACATCCGCGAGACCTTGAACAC 106298 || || || || | | || | | | || || | || || | |||||| |||| Sbjct 1910 CTCTGGAGAGTCGAAAG-GCAGTCTGAGGAGCATGAAAGCGTCGGCCAAACCTTGGACAC 1852 Query 106299 CCAAACCAATAGGTCTGTGTCGCATATTAGACTTTCGCGCAGTCTCAACGGGATAAAAAT 106358 | | | |||| ||||||| || ||| ||||| | || || | ||| ||||| ||| Sbjct 1851 CAACAGCAATCGGTCTGTTTCTCATGTTAGATCTCCGTGCCTCCGGAACAGGATAGTAAT 1792 Query 106359 TTCTGTCAATGACTCGGTTTAGATTTTTGGTAACAATCTTTGTGATTTCATGAAGTTTTT 106418 | || |||| | ||| | || |||| ||||| ||| | ||| || || | ||| | Sbjct 1791 TGACATCGATGATTTTGTTCAAGTTCTTGGCAACAACCTTGGCGATCTCGTGCAATTTCT 1732 Query 106419 CATAAT-----CAA-AAGTGCGA--GTCTCTTCATTGACATACTTTGGAAGGGCGATTGA 106470 || | | || ||||| || ||| || | |||| | || | || | || Sbjct 1731 CAAAGTTGTACCAGGAAGTGTGATCGTCACTC--TCGACAAAGGCAGGCAACGCAACCGA 1674 Query 106471 TGCCAAATTGCAAACAGCCGTCTCATCCTTATCTGTGTACTCTAAAATTTCTGTACACAA 106530 ||||| || || ||||| ||||| || | || || | ||| || |||||| Sbjct 1673 AGCCAAGTTACAGACAGCGACTTCATCGTTCGAAGAATATTCGACAATCTCACAACACAA 1614 Query 106531 GTTGGAACTCTTAATCGTCCCCAAATTCTTTTGGTTACTCTTTTTGTTGCACGCATCCTT 106590 ||||||| || ||| | ||||| |||| |||||| ||| |||| || || ||||| Sbjct 1613 GTTGGAAGATTTGATCATACCCAAGTTCTGTTGGTTGGATTTTGTGTTACATGCGTCCTT 1554 Query 106591 GTAGAGCATGTAGGGCGTCCCCGTCTCCGTCTGTGACTTGAGAATTGCCTTCCACA-CAT 106649 |||||||||| | || || ||||| || || || | | | || | | ||||| | | Sbjct 1553 GTAGAGCATGAAAGGAGTACCCGTTTCAGTTTGGGCTTCCAAGATCGAGTACCACAACTT 1494 Query 106650 CGGCGGCTGGTACAATGGCGTTGGCCCGTCCCTCCGCC---TCGTACTTTGTGTAGAGGG 106706 | | || | |||| || | || | | ||||| ||||| || || Sbjct 1493 TTGTGCCTTG----ATGGTCTTTCTACCTCTGTTTTCTCTTTCGTATTTTGTATATAGCT 1438 Query 106707 CTTCAAACTCCTCACCCACCGCGTCGGAGAGACCTGGTGCCTTGTCTGGACAGAAAAGAG 106766 |||| ||||| ||||| ||||||| | ||||| ||| ||| ||||||||| Sbjct 1437 CTTCGAACTCGTCACCGTAGACGTCGGACAAGCCTGGGACCTCACTTGGGGAGAAAAGAG 1378 Query 106767 ACCATTGACCACCCTCCTCAACCCGCTTCATGAAAAGGTCTGGAATCCACAGGGATGAAA 106826 ||||| | || |||||| | ||||||||| | ||| || ||||||| | | | Sbjct 1377 TCCATTCCTGATTCTGCTCAACTCTCTTCATGAACAAGTCAGGTATCCACAATGCAGGGA 1318 Query 106827 AGAGATCTCTA-CACCGAGCCTCTTCGTCACCTTGGTTGAGTCGTAACTCAAGGAACTCC 106885 | | ||||| | | || ||||| | ||| ||||| || | || | ||| || Sbjct 1317 ACAAGTCTCTGGCTCTGATT-TCTTCCTTACCGTGGTTCTTTCTCACGTCGATGAAGTCG 1259 Query 106886 ATGATATCCGCGTGCCATGGCTCAAGATAGACTGCGATAGATCC----CTTTCGACGCCC 106941 | |||||| | |||||||||||||||||||| || | | || |||| | || Sbjct 1258 AAGATATCGGAGTGCCATGGCTCAAGATAGAGCGCAAAGGCACCTGGTCTTTTG-TTACC 1200 Query 106942 AGCTTGATTTACATAGCGCGCTGTGGCGTTAAATACGCGAAGCATTGGAATAATACCATC 107001 | |||| | ||||| | || ||| ||| || || || | ||||||||| ||||| | Sbjct 1199 ACCTTGGTCGACATATCTGGCCGTGTTGTTGAAAACACGCATCATTGGAATGATACCGTT 1140 Query 107002 TGATTGACCATTTGTCCCCCGAA--TACGAGATTTATTGGCTCTCACATCATGGATGTGC 107059 || ||| || || || || || ||| | ||||||| | | ||||||||| Sbjct 1139 GGAAGTACCGTTGGTACCTGCAATGTAGGAGCCT--GTGGCTCTGATGTTGTGGATGTGC 1082 Query 107060 ATCCCAATACCCCCAGCCCACTTTGAGATTTGCGCACACTCCGTAAGAGTTCCATAGATA 107119 | |||||||| || || ||| ||||| ||||||||| | | ||| | |||||| Sbjct 1081 AAACCAATACCACCTGCGGTCTTGGAGATCAGCGCACACTGTTTCAAAGTGTCGTAGATA 1022 Query 107120 CCGTTGATTGAGTCCTCCTTGTTGGCGATAAGGAAGCAACTGGACATCTGCGGTCTTGGT 107179 || | || || || || | | |||| | ||| || ||||||||| |||||| Sbjct 1021 CCCTCAATCGAATCATCTTGCATTGCGACCAAGAAACAGGAGGACATCTGGTTTCTTGGG 962 Query 107180 GTACCAGCATTGAAGAGGGTTGGTGTTGCGTGAATGAACATACCT-TGGGACATCTTGTC 107238 ||||| || ||||| | ||| || | |||||| |||| || || | |||||| || Sbjct 961 GTACCTGCGTTGAACAAGGTAGGAGAAGCGTGAGTGAA-GTATCTCTTAGACATCAAGTT 903 Query 107239 GTATGTCTCCAAGACAGAATCAATGTCTTCCCCGTGGATGCCGATGGCCACACGCATAAA 107298 ||| ||||| | | | |||||||| || ||||| || |||| || || | ||| | Sbjct 902 GTAGGTCTCGATGGCGCTCTCAATGTCGTCGCCGTGAATACCGACAGCGACTCTCATGAT 843 Query 107299 CATGTATTGGGGTGTTTCCATGAGGATGCCATCGAGCCGTTGAAGATAGCTCTTCTCAAG 107358 || || |||||| ||||| | ||||||| | | ||| ||| |||| || Sbjct 842 CAAGTGCTGGGGTCTTTCCGCAATCTTGCCATCCAATCTCAAAAGGTAGGATCTCTCGAG 783 Query 107359 GGTTTTGAGACCAAAGTAA 107377 ||| |||| || |||||| Sbjct 782 GGTCTTGAAGCCGAAGTAA 764 >seq30 Length=26055 Score = 91.5 bits (100), Expect = 2e-13 Identities = 235/352 (67%), Gaps = 6/352 (2%) Strand=Plus/Plus Query 106092 CTTCCCACATATCAAATTGAAGCACCCCTTGGGACGTGGGAGAACCCTCAAATGTCTCAT 106151 ||| |||||||||||||||||||| ||||| || ||||||| || || | | | || Sbjct 2393 CTTTCCACATATCAAATTGAAGCAAACCTTGTGAAATGGGAGACCCATCGTAAGATTGAT 2452 Query 106152 AGGAACCTTGGGCTTCAGCCAATTCACAGCTCGCCTCCAGGGATGCGTGATACATGGTTT 106211 | ||| || || ||||| |||||| |||| | ||| || || ||||||| Sbjct 2453 ACTTCCCTCGGCTTTGTGCCAACTCACAGGATTGTTCCAAAGTTGCATGGTAAATGGTTT 2512 Query 106212 CAAAGATACGAGCATTCATCTCCTTGGCTTCATCTGAATCAAA-TGCGTAGCGGCACAAA 106270 |||| || | || | ||| || | ||| || |||| || || || ||| | Sbjct 2513 CAAATATTTTAATGTTGAGCTCTTTCGACTCAGGAGATCCAAACGGCATA-CGCAACATA 2571 Query 106271 ATAAATACATCCGCGAGACCTTGAACACCCAAACCAATAGGTCTGTGTCGCATATTAGA- 106329 | || ||||| || || ||||||||||| || || || ||||||| | || ||| || Sbjct 2572 AAGAAAACATCAGCAAGTCCTTGAACACCTAAGCCTATGGGTCTGTTTTTCAGATTCGAT 2631 Query 106330 CTTTCGCGCAG-TCTCAACGGGATAAAAATTTCTGTCAATGACTCGGTTTAGATTTTTGG 106388 |||| ||||| | |||| ||||| || | ||||||| || | | ||| | Sbjct 2632 CTTT--CGCAGTTTTCAAGTGGATACTTGTTGATATCAATGATTCTATCCAAATTCCGGC 2689 Query 106389 TAACAATCTTTGTGATTTCATGAAGTTTTTCATAATCAAAAGTGCGAGTCTC 106440 ||| | ||| |||||||| ||||| | ||| |||| | | | |||| Sbjct 2690 AAACCACCTTGCATATTTCATGCAGTTTCAGAAAATTAAAACTTCCATTCTC 2741 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 589976950375280