Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pichia_20membranifaciens_20[genbank_20GCA_5F001950575.1_202016-12-
15] 522 sequences; 11,394,881 total letters
Query= NC_015284.1
Length=183806
Score E
Sequences producing significant alignments: (Bits) Value
seq67 181 1e-40
>seq67
Length=91683
Score = 181 bits (200), Expect = 1e-40
Identities = 285/401 (71%), Gaps = 14/401 (3%)
Strand=Plus/Minus
Query 159396 TTTGATACCAGAGTCAGCACATGGAACTAATCCTGCATCAGCAGTGATGGCAGGGATGAA 159455
||| || |||| ||||| || || || || |||||||| ||| ||||| || ||||
Sbjct 77444 TTTAATTCCAGTCTCAGCTCACGGTACCAACCCTGCATCTGCAACCATGGCTGGCTTGAA 77385
Query 159456 AGTTGTAGGTGTCAAGTGTGATGATG--ATGGCAACATAGACATCAAAGATCTAGAGAAG 159513
|||| | |||||||| | | | |||| || ||||| | ||||||| ||
Sbjct 77384 AGTTATCCCAATCAAGTGT--TTAAGCAATGGTAATTTAGACCTTGAAGATCTG----AG 77331
Query 159514 AAAGCAATCATGAATA-CATTTG---AACT-GTCATGTATTATGATTACATATCCATCTA 159568
||||||| | |||| | || | |||| | | ||||||| | ||||||||||| |
Sbjct 77330 AAAGCAAGC-TGAAAAGCACTCCGAAAACTTGGCCGCTATTATGGTCACATATCCATCCA 77272
Query 159569 CACATGGTGTATTTGAAACAAACATCAGACAGATATGTAAGATTGTTCATGAGAATGGTG 159628
| ||||| |||||||| ||| ||| ||| | |||| | || |||| || ||||||
Sbjct 77271 CTTATGGTCTATTTGAACCAACCATTAGAGACGCATGTGAAATCATTCACCAGCATGGTG 77212
Query 159629 GTCAGGTATATCTTGATGGTGCAAATCTAAATGCACAGGTAGGTCTAGCAAAACCATGTG 159688
||||||| || || ||||||||||| | || || || || ||| || | ||| |||
Sbjct 77211 GTCAGGTCTACCTCGATGGTGCAAACATGAACGCCCAAGTTGGTTTAACCTCTCCAGGTG 77152
Query 159689 ACTATGGTGCAGATGTATGTCATCTAAACTTACATAAGACATTCTGTATTCCACATGGAG 159748
| | ||||||||||| ||||| | ||||| || ||||| || ||||| ||||| |
Sbjct 77151 ATTTGGGTGCAGATGTTTGTCACTTGAACTTGCACAAGACCTTTGCAATTCCTCATGGTG 77092
Query 159749 GTGGAGGTCCTGGCGTAGGTCCTATTGGTGTAGCAAAACAT 159789
|||| ||||| || || ||||| ||| |||| || |||||
Sbjct 77091 GTGGTGGTCCGGGTGTTGGTCCAATTTGTGTTGCTGAACAT 77051
Score = 102 bits (112), Expect = 1e-16
Identities = 179/261 (69%), Gaps = 0/261 (0%)
Strand=Plus/Minus
Query 157881 TATAGGTCAAGGATACTATGGAACCATCACACCCCCAGTCATACAGCGAAACGTTCTTGA 157940
||| ||| | || ||||| || |||| || | ||||| || ||||| | | ||
Sbjct 79004 TATCGGTAAGGGTTACTACGGCACCAAGTTGCCTCTTGTCATCCAAAGAAACTTGATGGA 78945
Query 157941 GAATCCTAGTTGGTACACATCTTACACTCCCTATCAAGCTGAGATATCTCAGGGAAGATT 158000
|| || |||||||| || ||||| || ||||| || || | || || || |||||
Sbjct 78944 AAACCCAGCGTGGTACACCTCGTACACCCCATATCAGGCGGAAGTTTCCCAAGGTAGATT 78885
Query 158001 GGAAGCTTTATTCAATTACCAAACGCTCATCACAGAACTCACAGGACTACCGATAGCAAA 158060
|||| ||| |||| ||||| || || | |||| | || || | ||| | || ||
Sbjct 78884 GGAAAGTTTGCTCAACTACCAGACTGTCGTGTCAGATTTGACCGGGATGCCGGTCGCCAA 78825
Query 158061 CGCATCTCTATTAGATGAAGCAACTGCAGCAGCAGAAGCAATGCTGTTAGCATATAATTC 158120
||| || | || || |||| || ||||||||||| |||||| | | |||| || |
Sbjct 78824 CGCGTCATTGTTGGACGAAGGTACCGCAGCAGCAGAGGCAATGATTCTCTCATACAACTT 78765
Query 158121 TACAAGAGATAAGAAGACTGT 158141
|||||| |||||||| |||
Sbjct 78764 GTCAAGAGGTAAGAAGAATGT 78744
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 588047362965920
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |