Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pichia_20membranifaciens_20[genbank_20GCA_5F001950575.1_202016-12- 15] 522 sequences; 11,394,881 total letters Query= NC_015284.1 Length=183806 Score E Sequences producing significant alignments: (Bits) Value seq67 181 1e-40 >seq67 Length=91683 Score = 181 bits (200), Expect = 1e-40 Identities = 285/401 (71%), Gaps = 14/401 (3%) Strand=Plus/Minus Query 159396 TTTGATACCAGAGTCAGCACATGGAACTAATCCTGCATCAGCAGTGATGGCAGGGATGAA 159455 ||| || |||| ||||| || || || || |||||||| ||| ||||| || |||| Sbjct 77444 TTTAATTCCAGTCTCAGCTCACGGTACCAACCCTGCATCTGCAACCATGGCTGGCTTGAA 77385 Query 159456 AGTTGTAGGTGTCAAGTGTGATGATG--ATGGCAACATAGACATCAAAGATCTAGAGAAG 159513 |||| | |||||||| | | | |||| || ||||| | ||||||| || Sbjct 77384 AGTTATCCCAATCAAGTGT--TTAAGCAATGGTAATTTAGACCTTGAAGATCTG----AG 77331 Query 159514 AAAGCAATCATGAATA-CATTTG---AACT-GTCATGTATTATGATTACATATCCATCTA 159568 ||||||| | |||| | || | |||| | | ||||||| | ||||||||||| | Sbjct 77330 AAAGCAAGC-TGAAAAGCACTCCGAAAACTTGGCCGCTATTATGGTCACATATCCATCCA 77272 Query 159569 CACATGGTGTATTTGAAACAAACATCAGACAGATATGTAAGATTGTTCATGAGAATGGTG 159628 | ||||| |||||||| ||| ||| ||| | |||| | || |||| || |||||| Sbjct 77271 CTTATGGTCTATTTGAACCAACCATTAGAGACGCATGTGAAATCATTCACCAGCATGGTG 77212 Query 159629 GTCAGGTATATCTTGATGGTGCAAATCTAAATGCACAGGTAGGTCTAGCAAAACCATGTG 159688 ||||||| || || ||||||||||| | || || || || ||| || | ||| ||| Sbjct 77211 GTCAGGTCTACCTCGATGGTGCAAACATGAACGCCCAAGTTGGTTTAACCTCTCCAGGTG 77152 Query 159689 ACTATGGTGCAGATGTATGTCATCTAAACTTACATAAGACATTCTGTATTCCACATGGAG 159748 | | ||||||||||| ||||| | ||||| || ||||| || ||||| ||||| | Sbjct 77151 ATTTGGGTGCAGATGTTTGTCACTTGAACTTGCACAAGACCTTTGCAATTCCTCATGGTG 77092 Query 159749 GTGGAGGTCCTGGCGTAGGTCCTATTGGTGTAGCAAAACAT 159789 |||| ||||| || || ||||| ||| |||| || ||||| Sbjct 77091 GTGGTGGTCCGGGTGTTGGTCCAATTTGTGTTGCTGAACAT 77051 Score = 102 bits (112), Expect = 1e-16 Identities = 179/261 (69%), Gaps = 0/261 (0%) Strand=Plus/Minus Query 157881 TATAGGTCAAGGATACTATGGAACCATCACACCCCCAGTCATACAGCGAAACGTTCTTGA 157940 ||| ||| | || ||||| || |||| || | ||||| || ||||| | | || Sbjct 79004 TATCGGTAAGGGTTACTACGGCACCAAGTTGCCTCTTGTCATCCAAAGAAACTTGATGGA 78945 Query 157941 GAATCCTAGTTGGTACACATCTTACACTCCCTATCAAGCTGAGATATCTCAGGGAAGATT 158000 || || |||||||| || ||||| || ||||| || || | || || || ||||| Sbjct 78944 AAACCCAGCGTGGTACACCTCGTACACCCCATATCAGGCGGAAGTTTCCCAAGGTAGATT 78885 Query 158001 GGAAGCTTTATTCAATTACCAAACGCTCATCACAGAACTCACAGGACTACCGATAGCAAA 158060 |||| ||| |||| ||||| || || | |||| | || || | ||| | || || Sbjct 78884 GGAAAGTTTGCTCAACTACCAGACTGTCGTGTCAGATTTGACCGGGATGCCGGTCGCCAA 78825 Query 158061 CGCATCTCTATTAGATGAAGCAACTGCAGCAGCAGAAGCAATGCTGTTAGCATATAATTC 158120 ||| || | || || |||| || ||||||||||| |||||| | | |||| || | Sbjct 78824 CGCGTCATTGTTGGACGAAGGTACCGCAGCAGCAGAGGCAATGATTCTCTCATACAACTT 78765 Query 158121 TACAAGAGATAAGAAGACTGT 158141 |||||| |||||||| ||| Sbjct 78764 GTCAAGAGGTAAGAAGAATGT 78744 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 588047362965920