Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pichia_20membranifaciens_20[genbank_20GCA_5F001950575.1_202016-12- 15] 522 sequences; 11,394,881 total letters Query= NC_015326.1 Length=346754 Score E Sequences producing significant alignments: (Bits) Value seq97 179 8e-40 seq138 158 3e-33 seq468 122 2e-22 seq6 95.1 3e-14 seq144 93.3 9e-14 >seq97 Length=66064 Score = 179 bits (198), Expect = 8e-40 Identities = 173/222 (78%), Gaps = 0/222 (0%) Strand=Plus/Minus Query 194919 TCTGAGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGT 194978 ||| | ||| || || | ||| | |||||| || ||||| || ||||| |||| | ||| Sbjct 5467 TCTCAATCTTAAGACCAAGTGCAAAGTGGATTCCTTTTGGATGTTGTAGTCGGATAAAGT 5408 Query 194979 TCTCCCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCC 195038 ||| |||||||| | |||||||| |||||||| | || ||| ||||| || ||||| || Sbjct 5407 TCTACCATCTTCCAATTGCTTACCAGCGAAGATCAATCTTTGCTGGTCAGGTGGAATACC 5348 Query 195039 TTCTTTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAG 195098 ||| |||||||| |||||||||||||| || ||||| ||||| ||| || || ||||| Sbjct 5347 TTCCTTGTCTTGGATTTTTTGCTTGACATTGTCAATAGTGTCGGAAGACTCAACCTCAAG 5288 Query 195099 GGTAACCGTCTTTCCTGTCAAAGTTTTTACGAACACTTGCAT 195140 ||||| ||||| || || | ||||| ||||| | |||||| Sbjct 5287 GGTAATAGTCTTACCGGTAAGGGTTTTGACGAAAATTTGCAT 5246 >seq138 Length=17849 Score = 158 bits (174), Expect = 3e-33 Identities = 168/222 (76%), Gaps = 0/222 (0%) Strand=Plus/Minus Query 194919 TCTGAGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGT 194978 ||| | |||||| || | ||| | || || |||||||| || ||||| |||| | ||| Sbjct 9722 TCTCAATCTCAAGACCAAGTGTAAGGTTGATTCTTTTTGGATGTTGTAGTCGGACAAAGT 9663 Query 194979 TCTCCCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCC 195038 ||| |||||||| | |||||||| || || ||||||| ||| ||||| || || || || Sbjct 9662 TCTACCATCTTCTAATTGCTTACCGGCAAAAATAAGTCTTTGCTGGTCAGGTGGGATACC 9603 Query 195039 TTCTTTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAG 195098 ||| || ||||| || ||||||||||| || || || ||||| ||| ||| ||||| | Sbjct 9602 TTCCTTATCTTGGATCTTTTGCTTGACATTATCGATAGTGTCAGAAGATTCGACTTCCAA 9543 Query 195099 GGTAACCGTCTTTCCTGTCAAAGTTTTTACGAACACTTGCAT 195140 ||||| ||||| || || || || || || || | |||||| Sbjct 9542 GGTAATGGTCTTACCAGTTAAGGTCTTGACAAAAATTTGCAT 9501 >seq468 Length=160 Score = 122 bits (134), Expect = 2e-22 Identities = 121/154 (79%), Gaps = 2/154 (1%) Strand=Plus/Minus Query 194919 TCTGAGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGG-CAAGAG 194977 ||| | |||||| || | ||| | ||| || || ||||| || ||||| || | |||| | Sbjct 153 TCTCAATCTCAACACCAAGTGCAAAGTCGATTCCTTTTGGATGTTGTAGTCAGACAAG-G 95 Query 194978 TTCTCCCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGC 195037 |||| || ||||| || || ||||| ||||| ||||||| || |||||||| ||||| | Sbjct 94 TTCTTCCGTCTTCTAGTTGTTTACCAGCGAAAATAAGTCTCTGCTGGTCTGGTGGAATAC 35 Query 195038 CTTCTTTGTCTTGAATTTTTTGCTTGACGTTCTC 195071 |||| ||||| || || |||||||||||||| || Sbjct 34 CTTCCTTGTCCTGGATCTTTTGCTTGACGTTATC 1 >seq6 Length=31370 Score = 95.1 bits (104), Expect = 3e-14 Identities = 148/212 (70%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 125148 GATGTTGACAAACGAGCACGGTACAGCATCAAACATCAAGTCGAGAGTAAACAGGCTTTC 125207 ||||||||| | || ||||||| || |||||||| || || ||||| ||||| ||||| Sbjct 5294 GATGTTGACGGATGAATACGGTACCGCTTCAAACATTAAATCCAGAGTTAACAGACTTTC 5353 Query 125208 TGTTCTTGGTGCCATTGTCTCTTGTCAGCAAAAACTCAAACTCTTGACAAAAGTCCCAGA 125267 ||||||| |||||| ||| || || ||| | || || | ||||| || || | Sbjct 5354 TGTTCTTTCTGCCATCACCTCCACGCAACAGAAATTAAAGCTTTACACAAACGTTCCTAA 5413 Query 125268 AAACGGCCTTGTGATTTTCAGTGGCACGGTGATGCTTCCCGAAGGTAAAGAAAAGAAAGT 125327 |||||| || || ||| |||| ||| || |||||||| ||||||||| | Sbjct 5414 AAACGGTCTGGTTGTTTATTGTGGTGAAGTGTTGACAGATGAAGGTAAGGAAAAGAAATT 5473 Query 125328 GGCATTTGACGTGGAACCTTTTCGCCCAATCA 125359 | | | | | | |||||||| ||||||| Sbjct 5474 GACCATCGCCTTCGAACCTTTCAAACCAATCA 5505 >seq144 Length=18003 Score = 93.3 bits (102), Expect = 9e-14 Identities = 89/114 (78%), Gaps = 0/114 (0%) Strand=Plus/Plus Query 195027 TGGAGGAATGCCTTCTTTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACT 195086 ||| ||||| ||||| ||||| || || |||||||||||||| || || ||||| || Sbjct 1 TGGTGGAATACCTTCCTTGTCCTGGATCTTTTGCTTGACGTTATCGATCGTGTCTGAGGA 60 Query 195087 TTCCACTTCAAGGGTAACCGTCTTTCCTGTCAAAGTTTTTACGAACACTTGCAT 195140 || || |||||||||| ||||| || ||||| || || ||||| | |||||| Sbjct 61 CTCAACCTCAAGGGTAATAGTCTTACCGGTCAATGTCTTAACGAAAATTTGCAT 114 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1109474179648374