Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pichia_20membranifaciens_20[genbank_20GCA_5F001950575.1_202016-12- 15] 522 sequences; 11,394,881 total letters Query= NC_017940.1 Length=127732 Score E Sequences producing significant alignments: (Bits) Value seq175 131 1e-25 >seq175 Length=70746 Score = 131 bits (144), Expect = 1e-25 Identities = 496/769 (64%), Gaps = 27/769 (4%) Strand=Plus/Plus Query 29709 GAAATCCTCTGCCTTAAAGTCGTCCAGGTTCTCCACCCTCCTGTTTATCCTCAGTGTGGG 29768 |||||| || || |||||||| | || |||| | || || | | || |||| Sbjct 31923 GAAATCTTCATATTTGAAGTCGTCTATGTCAGTCACCTTTCTTTTAACCACCAACTTGGG 31982 Query 29769 AAAGGGTCTGGGCTCCCTCTCGAGCTGAGTCTTCAGCGGTTCCACGTGATCCAGGTAGAC 29828 || ||||||| | |||| | ||| |||| | || ||||| | | || || Sbjct 31983 GAATTTTCTGGGCACTCTCTGCAACTGCTCTTTCAAGGCGTCGACGTGGTTCGAATACAC 32042 Query 29829 GTGAGCGTCTCCCAGGGTGTGGACAAACTCTCCCGGTTCTAGCCCGGTGACGTGAGCCAT 29888 ||| ||||| |||| ||| ||||||||||| || || | | ||| || || Sbjct 32043 GTGGGCGTCACCCATAACGTGTACAAACTCTCCGGGCTCCATGTCTACGACCATTGCGAT 32102 Query 29889 CATGTACGTGAGGAGAGAGTAGCTGGCGATGTTAAAGGGTACCCCGAGCCCCATGTCCCC 29948 |||||| ||||| | | |||| ||||||||| ||||| || || | |||||||| | Sbjct 32103 CATGTAGGTGAGCAAGGCGTAGGAGGCGATGTTGAAGGGCACGCCCAAGCCCATGTCGCA 32162 Query 29949 CGACCTCTGGTAGAGCTGACACGAGAGCT----CT---CCG---TCG-----CTCACGTA 29993 || |||||||| | ||| || |||| || ||| ||| |||||||| Sbjct 32163 GGATCTCTGGTACATCTGGCAGCTGAGCCGAGGCTTGCCCGATTTCGGGAAGCTCACGTA 32222 Query 29994 AAACTGACACATGGTGTGGCACGGAGGAAGAGCCATGAGGCCCAAGTCTTTGGGGTTCCA 30053 ||||| || | |||||| || || | ||||| || | |||||||| Sbjct 32223 GAACTGGCAGAACACGTGGCAGGGTGGCAAGGCCATCTCCTTGAACGCCGGCGGGTTCCA 32282 Query 30054 GGCGCACACGATGATGCGCCTGTCTTCTGGGTTGTTCCTGATGAGGTCCACGGCGTTTTG 30113 ||| ||| |||||| | ||||| | ||| || || | | || | | | Sbjct 32283 CGCGGACATGATGATTCTTCTGTCATATGGATTTGTCTTCAACGTGTGTATGATGGACGC 32342 Query 30114 CAGCTGATCCACCCCCATCCCCGAGTAGTCTGC-CCTCATGTCCGTGTACTCTGCTCCGA 30172 ||||| || ||| || ||||||||||| | || ||| ||||||||||||| | Sbjct 32343 GAGCTGGTCGTAGCCCTGGCCAGAGTAGTCTGCGTCGCA-ATCCTTGTACTCTGCTCCAA 32401 Query 30173 AATGCCTCCACTGGAACCCGTACACCGGTCCCAGGTCTCCCTCT-TCCCTGTGCTCGAAG 30231 | || ||||||||||| ||||| || || |||| ||| |||||| | | | | || ||| Sbjct 32402 AGTGTCTCCACTGGAAGCCGTAGACGGGACCCAAGTCGCCCTCTCTGCGGGAGGTC-AAG 32460 Query 30232 CCCCTCTTGTCCAAAAAGTCTCTGGAACCGTTGGCGTCCCAGATCTTTACCCCCTTCTCG 30291 ||| ||| | | || | || |||||| | |||||||| || || || || || Sbjct 32461 CCCAGGGAGTCGAGGTACTCCCGTGAGCCGTTGCCTTCCCAGATTTTGACGCCTTTTGCG 32520 Query 30292 GAGAGCTCTTTGGAGTTTGTGGACCCTCTGACGAACCACAGCAGCTCCTCCACGACGGCC 30351 || ||| || | || ||| || || || |||||||| || || | | || | || Sbjct 32521 GAAAGCAGCTTTGCGTCTGTCGAGCCGTGCACAAACCACAGGAGTTCGTGGAGGATGCCC 32580 Query 30352 TTCCAAAAGACCCTCTTGGTCGTGAGGAGGGGAAACTGTCCCTT----GAGGCCGTACAT 30407 ||| ||||| |||| || || | || || || |||||| | |||| || || | Sbjct 32581 TTCATGAAGACTTTCTTTGTGGTCAACAGAGGGAA-TGTCCCATCTGAGAGGTCGAACCT 32639 Query 30408 GGCCT---GAGAACCAAACACGGACAAGACTCCCGTGCCCGTCCTGTCT 30453 | || | | |||| | ||| | |||||||| ||||||||| Sbjct 32640 GAGCTGTGGTGGCGCAAAAAGGGAGTACGTGCCCGTGCCAGTCCTGTCT 32688 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 408615000425906