Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pichia_20membranifaciens_20[genbank_20GCA_5F001950575.1_202016-12- 15] 522 sequences; 11,394,881 total letters Query= NC_019495.1 Length=290304 Score E Sequences producing significant alignments: (Bits) Value seq183 232 1e-55 >seq183 Length=27355 Score = 232 bits (256), Expect = 1e-55 Identities = 578/868 (67%), Gaps = 40/868 (5%) Strand=Plus/Plus Query 25474 GATATATGGGAGATGTACAAGAAGGCTCAAAACTCAAACTGGACCGCCGAAGAGATTGAT 25533 || |||||| |||||||||||||||| | ||| ||||||||||| ||||| ||| Sbjct 25952 GAGATATGGCAGATGTACAAGAAGGCAGAGGCCTCTTTTTGGACCGCCGAGGAGATCGAT 26011 Query 25534 CTGGCCAAGGACATGGACGGCTGGTACGCTCTATCCAAAGACGAGCAGC---ATTT--TC 25588 || | |||||| || ||| |||| ||| | || ||| | || | || || Sbjct 26012 CTCTCAAAGGACCTGCACGACTGGAACGAGAGGTTGAACGACAACGAGAGATACTTCATC 26071 Query 25589 TCAAGTACGTGTTGGCATTCTTTGCAGCCTCTGATGGTATAGTGAACGAGAATCTGTGCG 25648 || || |||||||| |||||||| || || || || || ||||||||||| || | Sbjct 26072 TCGAGA--GTGTTGGCGTTCTTTGCCGCTTCGGACGGGATTGTGAACGAGAACTTGGTGG 26129 Query 25649 AGAGATTCACCAGGGAAGTGCAGTACGTGGAGGCCAAGTGTTTCTACGGTTTCCAGATGG 25708 ||| ||| || || |||||| |||||| ||||||||||||||||||||||| Sbjct 26130 AGAACTTCTCCGCAGAGGTGCAGGTGCCGGAGGCAAAGTGTTTCTACGGTTTCCAGATCA 26189 Query 25709 CCATCGAAAATGTGCACTCTGAGGTGTATGCCAAGCTTCTGATG---ACGTACATTACAG 25765 || || || | ||||| ||| ||| | | | |||| |||||| | | | Sbjct 26190 TGATGGAGAACATCCACTCGGAGACGTACTC---GTTGTTGATCGACACGTACGTGAAGG 26246 Query 25766 ACGTCGCCGAGAGAGATCGG----CTGTTTGGTGCCATCGAGCACATACCCAGCATCAAG 25821 | |||| |||| || || || || ||||| |||| || |||||||| Sbjct 26247 AT----CCGAAGGAGAACGAGTACCTCTTCAACGCGATCGATAACATCCCGTGCATCAAG 26302 Query 25822 AGGAAGGCGCGGTGGGCCATGAAGTGGATCAACAGCCAGAGCGCTACGTTTGGCGAGCGG 25881 |||||| |||||| | | ||||||||| | || || |||||||||||| Sbjct 26303 GAGAAGGCCGAGTGGGCGCTCAGATGGATCAACGACAAGGATGCGTTGTTTGGCGAGCGC 26362 Query 25882 CTGGTAGCCTTTGCTGCTGTGGAGGGCATCTTTTTCAGCGGTTCGTTTGCGGCCATCTTC 25941 |||| || ||||| || |||||||| || || ||| || ||||||||| | |||||| Sbjct 26363 TTGGTGGCGTTTGCCGCCGTGGAGGGGATTTTCTTCTCGGGCTCGTTTGCGTCGATCTTC 26422 Query 25942 TGGCTCAAGCAGAAGGGGACCATGCCCGGGCTGTACTTTTCCAACGAGCTCATCAGCAGG 26001 ||| | ||| || |||| ||||||||| || || || |||||| | ||| | || Sbjct 26423 TGGTTGAAGAAGCGGGGGCTCATGCCCGGCTTGACGTTCTCGAACGAGTTGATCTGTCGG 26482 Query 26002 GACGAGGGTCTCCACAGAGATTTTGCCTGCCTGCTCTACACGGGCCACTTGCTCCACAAA 26061 |||||||| | |||| || ||||||||| || | | | || ||| || || | Sbjct 26483 GACGAGGGCTTGCACACCGACTTTGCCTGCTTGTTGTTCTCG---CACCTGAATAAC-AC 26538 Query 26062 CCTTCTCAAGA-GACCGTCTACAGTATCATCAAAGAGGCTGTGGAGATCGAGAAGGAGT- 26119 || | ||| || ||| || ||||||| ||||| || || ||||||||| | Sbjct 26539 CCCGGACGAGACGATTGTCCGCAAGATCATCACCGAGGCCGTTGATATCGAGAAGCGCTA 26598 Query 26120 -TTCNNNNNNNNNNNNNNNNNNNNNNNNNNNTGGGCATGAACAACAGAC-TCATGAGCCA 26177 ||| ||||||||||||| ||| | ||| |||| Sbjct 26599 CTTC--ACTGACGCCTTGCCCGTCAACTTGTTGGGCATGAACAA-GGACTTGATGTGCCA 26655 Query 26178 ATACATTGAGTATGTGGCCGACCATCTG-CTGT-GCCAGCTGGGACTCGCCAGACTCTAC 26235 ||| | |||| ||| ||||||| || ||| ||| || || || || | |||| Sbjct 26656 GTACGTCGAGTTTGTCGCCGACCGCTTGTTTGTCGCC--CTCGGCTGCGACAAGCACTAC 26713 Query 26236 AGTACG--CCTAACCCGTTCGACTTTATGGAAAACATATCGTTGGAAGGGAAGACCAACT 26293 | ||| | ||||| ||||| || ||||| ||||| ||| | | || || ||||||| Sbjct 26714 A--ACGTCACCAACCCATTCGATTTCATGGAGAACATTTCGCTTGCCGGCAAAACCAACT 26771 Query 26294 TCTTTGAAAAGAGGGTCGGCGACTATCA 26321 |||| || ||| ||||| ||||||||| Sbjct 26772 TCTTCGAGAAGCGGGTCTCCGACTATCA 26799 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 928838739287680