Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pichia_20membranifaciens_20[genbank_20GCA_5F001950575.1_202016-12-
15] 522 sequences; 11,394,881 total letters
Query= NC_019495.1
Length=290304
Score E
Sequences producing significant alignments: (Bits) Value
seq183 232 1e-55
>seq183
Length=27355
Score = 232 bits (256), Expect = 1e-55
Identities = 578/868 (67%), Gaps = 40/868 (5%)
Strand=Plus/Plus
Query 25474 GATATATGGGAGATGTACAAGAAGGCTCAAAACTCAAACTGGACCGCCGAAGAGATTGAT 25533
|| |||||| |||||||||||||||| | ||| ||||||||||| ||||| |||
Sbjct 25952 GAGATATGGCAGATGTACAAGAAGGCAGAGGCCTCTTTTTGGACCGCCGAGGAGATCGAT 26011
Query 25534 CTGGCCAAGGACATGGACGGCTGGTACGCTCTATCCAAAGACGAGCAGC---ATTT--TC 25588
|| | |||||| || ||| |||| ||| | || ||| | || | || ||
Sbjct 26012 CTCTCAAAGGACCTGCACGACTGGAACGAGAGGTTGAACGACAACGAGAGATACTTCATC 26071
Query 25589 TCAAGTACGTGTTGGCATTCTTTGCAGCCTCTGATGGTATAGTGAACGAGAATCTGTGCG 25648
|| || |||||||| |||||||| || || || || || ||||||||||| || |
Sbjct 26072 TCGAGA--GTGTTGGCGTTCTTTGCCGCTTCGGACGGGATTGTGAACGAGAACTTGGTGG 26129
Query 25649 AGAGATTCACCAGGGAAGTGCAGTACGTGGAGGCCAAGTGTTTCTACGGTTTCCAGATGG 25708
||| ||| || || |||||| |||||| |||||||||||||||||||||||
Sbjct 26130 AGAACTTCTCCGCAGAGGTGCAGGTGCCGGAGGCAAAGTGTTTCTACGGTTTCCAGATCA 26189
Query 25709 CCATCGAAAATGTGCACTCTGAGGTGTATGCCAAGCTTCTGATG---ACGTACATTACAG 25765
|| || || | ||||| ||| ||| | | | |||| |||||| | | |
Sbjct 26190 TGATGGAGAACATCCACTCGGAGACGTACTC---GTTGTTGATCGACACGTACGTGAAGG 26246
Query 25766 ACGTCGCCGAGAGAGATCGG----CTGTTTGGTGCCATCGAGCACATACCCAGCATCAAG 25821
| |||| |||| || || || || ||||| |||| || ||||||||
Sbjct 26247 AT----CCGAAGGAGAACGAGTACCTCTTCAACGCGATCGATAACATCCCGTGCATCAAG 26302
Query 25822 AGGAAGGCGCGGTGGGCCATGAAGTGGATCAACAGCCAGAGCGCTACGTTTGGCGAGCGG 25881
|||||| |||||| | | ||||||||| | || || ||||||||||||
Sbjct 26303 GAGAAGGCCGAGTGGGCGCTCAGATGGATCAACGACAAGGATGCGTTGTTTGGCGAGCGC 26362
Query 25882 CTGGTAGCCTTTGCTGCTGTGGAGGGCATCTTTTTCAGCGGTTCGTTTGCGGCCATCTTC 25941
|||| || ||||| || |||||||| || || ||| || ||||||||| | ||||||
Sbjct 26363 TTGGTGGCGTTTGCCGCCGTGGAGGGGATTTTCTTCTCGGGCTCGTTTGCGTCGATCTTC 26422
Query 25942 TGGCTCAAGCAGAAGGGGACCATGCCCGGGCTGTACTTTTCCAACGAGCTCATCAGCAGG 26001
||| | ||| || |||| ||||||||| || || || |||||| | ||| | ||
Sbjct 26423 TGGTTGAAGAAGCGGGGGCTCATGCCCGGCTTGACGTTCTCGAACGAGTTGATCTGTCGG 26482
Query 26002 GACGAGGGTCTCCACAGAGATTTTGCCTGCCTGCTCTACACGGGCCACTTGCTCCACAAA 26061
|||||||| | |||| || ||||||||| || | | | || ||| || || |
Sbjct 26483 GACGAGGGCTTGCACACCGACTTTGCCTGCTTGTTGTTCTCG---CACCTGAATAAC-AC 26538
Query 26062 CCTTCTCAAGA-GACCGTCTACAGTATCATCAAAGAGGCTGTGGAGATCGAGAAGGAGT- 26119
|| | ||| || ||| || ||||||| ||||| || || ||||||||| |
Sbjct 26539 CCCGGACGAGACGATTGTCCGCAAGATCATCACCGAGGCCGTTGATATCGAGAAGCGCTA 26598
Query 26120 -TTCNNNNNNNNNNNNNNNNNNNNNNNNNNNTGGGCATGAACAACAGAC-TCATGAGCCA 26177
||| ||||||||||||| ||| | ||| ||||
Sbjct 26599 CTTC--ACTGACGCCTTGCCCGTCAACTTGTTGGGCATGAACAA-GGACTTGATGTGCCA 26655
Query 26178 ATACATTGAGTATGTGGCCGACCATCTG-CTGT-GCCAGCTGGGACTCGCCAGACTCTAC 26235
||| | |||| ||| ||||||| || ||| ||| || || || || | ||||
Sbjct 26656 GTACGTCGAGTTTGTCGCCGACCGCTTGTTTGTCGCC--CTCGGCTGCGACAAGCACTAC 26713
Query 26236 AGTACG--CCTAACCCGTTCGACTTTATGGAAAACATATCGTTGGAAGGGAAGACCAACT 26293
| ||| | ||||| ||||| || ||||| ||||| ||| | | || || |||||||
Sbjct 26714 A--ACGTCACCAACCCATTCGATTTCATGGAGAACATTTCGCTTGCCGGCAAAACCAACT 26771
Query 26294 TCTTTGAAAAGAGGGTCGGCGACTATCA 26321
|||| || ||| ||||| |||||||||
Sbjct 26772 TCTTCGAGAAGCGGGTCTCCGACTATCA 26799
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 928838739287680
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |