Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pichia_20membranifaciens_20[genbank_20GCA_5F001950575.1_202016-12-
15] 522 sequences; 11,394,881 total letters
Query= NC_019945.1
Length=132978
Score E
Sequences producing significant alignments: (Bits) Value
seq138 134 1e-26
seq97 122 7e-23
seq468 87.8 2e-12
>seq138
Length=17849
Score = 134 bits (148), Expect = 1e-26
Identities = 173/239 (72%), Gaps = 0/239 (0%)
Strand=Plus/Plus
Query 28548 GTAAAAATGCAAATATTTGTAAAAACATTAACGGGTAAAACCATTACCGCCGAAACGGAA 28607
|| || |||||||| ||||| || || ||||| ||||| ||||||||| ||| |||
Sbjct 9495 GTCAAGATGCAAATTTTTGTCAAGACCTTAACTGGTAAGACCATTACCTTGGAAGTCGAA 9554
Query 28608 CCTTCAGAGACGGTGGCCGATCTCAAGCAAAAAATCGCCGACAAAGAGGGAGTGCCCGTA 28667
|||| || || | | || |||||||||| ||| || || || || | ||
Sbjct 9555 TCTTCTGACACTATCGATAATGTCAAGCAAAAGATCCAAGATAAGGAAGGTATCCCACCT 9614
Query 28668 GATCAACAGAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGAT 28727
|| || || |||||||| ||||| || || ||||| |||||| || |||| || ||||
Sbjct 9615 GACCAGCAAAGACTTATTTTTGCCGGTAAGCAATTAGAAGATGGTAGAACTTTGTCCGAC 9674
Query 28728 TATAACATTCAAAAAGAATCTACTCTGCACATGGTATTAAGATTACGAGGAGGGATAAT 28786
|| ||||| ||||||||||| || | ||| |||| || ||||| |||| || || ||
Sbjct 9675 TACAACATCCAAAAAGAATCAACCTTACACTTGGTCTTGAGATTGAGAGGTGGTATCAT 9733
>seq97
Length=66064
Score = 122 bits (134), Expect = 7e-23
Identities = 165/230 (72%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 28551 AAAATGCAAATATTTGTAAAAACATTAACGGGTAAAACCATTACCGCCGAAACGGAACCT 28610
|| |||||||| || || ||||| | || ||||| || |||||| || || ||
Sbjct 5243 AAGATGCAAATTTTCGTCAAAACCCTTACCGGTAAGACTATTACCCTTGAGGTTGAGTCT 5302
Query 28611 TCAGAGACGGTGGCCGATCTCAAGCAAAAAATCGCCGACAAAGAGGGAGTGCCCGTAGAT 28670
|| || || | | | || |||||||||||||| ||||| || || | || ||
Sbjct 5303 TCCGACACTATTGACAATGTCAAGCAAAAAATCCAAGACAAGGAAGGTATTCCACCTGAC 5362
Query 28671 CAACAGAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTAT 28730
|| || ||| | ||||| || || || |||||||||||| || |||| | |||| ||
Sbjct 5363 CAGCAAAGATTGATCTTCGCTGGTAAGCAATTGGAAGATGGTAGAACTTTATCCGACTAC 5422
Query 28731 AACATTCAAAAAGAATCTACTCTGCACATGGTATTAAGATTACGAGGAGG 28780
||||| ||||| ||||| ||| ||||| |||| |||||||| |||| ||
Sbjct 5423 AACATCCAAAAGGAATCCACTTTGCACTTGGTCTTAAGATTGAGAGGTGG 5472
>seq468
Length=160
Score = 87.8 bits (96), Expect = 2e-12
Identities = 110/151 (73%), Gaps = 0/151 (0%)
Strand=Plus/Plus
Query 28630 TCAAGCAAAAAATCGCCGACAAAGAGGGAGTGCCCGTAGATCAACAGAGACTTATCTTTG 28689
|||||||||| ||| ||||| || || | || ||| || ||||||||||| || |
Sbjct 8 TCAAGCAAAAGATCCAGGACAAGGAAGGTATTCCACCAGACCAGCAGAGACTTATTTTCG 67
Query 28690 CGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAACATTCAAAAAGAATCTA 28749
| || |||||| | ||||| | ||| || | || || ||||| ||||| ||||| |
Sbjct 68 CTGGTAAACAACTAGAAGACGGAAGAACCTTGTCTGACTACAACATCCAAAAGGAATCGA 127
Query 28750 CTCTGCACATGGTATTAAGATTACGAGGAGG 28780
|| ||||| |||| || ||||| |||| ||
Sbjct 128 CTTTGCACTTGGTGTTGAGATTGAGAGGTGG 158
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 425402093627838
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |