Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pichia_20membranifaciens_20[genbank_20GCA_5F001950575.1_202016-12- 15] 522 sequences; 11,394,881 total letters Query= NC_019945.1 Length=132978 Score E Sequences producing significant alignments: (Bits) Value seq138 134 1e-26 seq97 122 7e-23 seq468 87.8 2e-12 >seq138 Length=17849 Score = 134 bits (148), Expect = 1e-26 Identities = 173/239 (72%), Gaps = 0/239 (0%) Strand=Plus/Plus Query 28548 GTAAAAATGCAAATATTTGTAAAAACATTAACGGGTAAAACCATTACCGCCGAAACGGAA 28607 || || |||||||| ||||| || || ||||| ||||| ||||||||| ||| ||| Sbjct 9495 GTCAAGATGCAAATTTTTGTCAAGACCTTAACTGGTAAGACCATTACCTTGGAAGTCGAA 9554 Query 28608 CCTTCAGAGACGGTGGCCGATCTCAAGCAAAAAATCGCCGACAAAGAGGGAGTGCCCGTA 28667 |||| || || | | || |||||||||| ||| || || || || | || Sbjct 9555 TCTTCTGACACTATCGATAATGTCAAGCAAAAGATCCAAGATAAGGAAGGTATCCCACCT 9614 Query 28668 GATCAACAGAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGAT 28727 || || || |||||||| ||||| || || ||||| |||||| || |||| || |||| Sbjct 9615 GACCAGCAAAGACTTATTTTTGCCGGTAAGCAATTAGAAGATGGTAGAACTTTGTCCGAC 9674 Query 28728 TATAACATTCAAAAAGAATCTACTCTGCACATGGTATTAAGATTACGAGGAGGGATAAT 28786 || ||||| ||||||||||| || | ||| |||| || ||||| |||| || || || Sbjct 9675 TACAACATCCAAAAAGAATCAACCTTACACTTGGTCTTGAGATTGAGAGGTGGTATCAT 9733 >seq97 Length=66064 Score = 122 bits (134), Expect = 7e-23 Identities = 165/230 (72%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 28551 AAAATGCAAATATTTGTAAAAACATTAACGGGTAAAACCATTACCGCCGAAACGGAACCT 28610 || |||||||| || || ||||| | || ||||| || |||||| || || || Sbjct 5243 AAGATGCAAATTTTCGTCAAAACCCTTACCGGTAAGACTATTACCCTTGAGGTTGAGTCT 5302 Query 28611 TCAGAGACGGTGGCCGATCTCAAGCAAAAAATCGCCGACAAAGAGGGAGTGCCCGTAGAT 28670 || || || | | | || |||||||||||||| ||||| || || | || || Sbjct 5303 TCCGACACTATTGACAATGTCAAGCAAAAAATCCAAGACAAGGAAGGTATTCCACCTGAC 5362 Query 28671 CAACAGAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTAT 28730 || || ||| | ||||| || || || |||||||||||| || |||| | |||| || Sbjct 5363 CAGCAAAGATTGATCTTCGCTGGTAAGCAATTGGAAGATGGTAGAACTTTATCCGACTAC 5422 Query 28731 AACATTCAAAAAGAATCTACTCTGCACATGGTATTAAGATTACGAGGAGG 28780 ||||| ||||| ||||| ||| ||||| |||| |||||||| |||| || Sbjct 5423 AACATCCAAAAGGAATCCACTTTGCACTTGGTCTTAAGATTGAGAGGTGG 5472 >seq468 Length=160 Score = 87.8 bits (96), Expect = 2e-12 Identities = 110/151 (73%), Gaps = 0/151 (0%) Strand=Plus/Plus Query 28630 TCAAGCAAAAAATCGCCGACAAAGAGGGAGTGCCCGTAGATCAACAGAGACTTATCTTTG 28689 |||||||||| ||| ||||| || || | || ||| || ||||||||||| || | Sbjct 8 TCAAGCAAAAGATCCAGGACAAGGAAGGTATTCCACCAGACCAGCAGAGACTTATTTTCG 67 Query 28690 CGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAACATTCAAAAAGAATCTA 28749 | || |||||| | ||||| | ||| || | || || ||||| ||||| ||||| | Sbjct 68 CTGGTAAACAACTAGAAGACGGAAGAACCTTGTCTGACTACAACATCCAAAAGGAATCGA 127 Query 28750 CTCTGCACATGGTATTAAGATTACGAGGAGG 28780 || ||||| |||| || ||||| |||| || Sbjct 128 CTTTGCACTTGGTGTTGAGATTGAGAGGTGG 158 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 425402093627838