Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pichia_20membranifaciens_20[genbank_20GCA_5F001950575.1_202016-12-
15] 522 sequences; 11,394,881 total letters
Query= NC_020842.1
Length=79114
Score E
Sequences producing significant alignments: (Bits) Value
seq95 158 6e-34
seq30 95.1 6e-15
>seq95
Length=34527
Score = 158 bits (174), Expect = 6e-34
Identities = 219/304 (72%), Gaps = 2/304 (1%)
Strand=Plus/Minus
Query 25915 ATTTTGCTCAACTTTCTCCATAAATAAATCTGGAATCCACATTGCATAAAATAAATCTCT 25974
||| ||||||||| ||| ||| || || || || ||||||| |||| || || |||||
Sbjct 1367 ATTCTGCTCAACTCTCTTCATGAACAAGTCAGGTATCCACAATGCAGGGAACAAGTCTCT 1308
Query 25975 CGCTCTCATTTCTTCTTTTCCGTGATTCTTTTTTAGATCTAAGAAATCAAAAATATCTGA 26034
||||| |||||||| || ||||| |||||| | | || | ||| || || ||||| ||
Sbjct 1307 GGCTCTGATTTCTTCCTTACCGTGGTTCTTTCTCACGTCGATGAAGTCGAAGATATCGGA 1248
Query 26035 GTGCCATGGTTCTAAATAGATAGCAAAACTACCTTTTCTTTTTCCTCCACCTTGATCTAC 26094
||||||||| || | ||||| ||||| |||| |||||| |||||||| || ||
Sbjct 1247 GTGCCATGGCTCAAGATAGAGCGCAAAGGCACCTGGTCTTTTGTTACCACCTTGGTCGAC 1188
Query 26095 GTATCTTGCAGTTTCATTGAAAACTTTCAACATTGGAACTAATCCAGTTGAAAAT-CCGT 26153
||||| || || | |||||||| || |||||||| | || | |||| || | ||||
Sbjct 1187 ATATCTGGCCGTGTTGTTGAAAACACGCATCATTGGAA-TGATACCGTTGGAAGTACCGT 1129
Query 26154 TTGTGCTATGAATCTTGGATCCTGTCGATCTAATATCGTGAGCATGAATACCGATTCCAC 26213
| || | ||| | ||| ||||| | ||| || | ||| || | ||| || ||||
Sbjct 1128 TGGTACCTGCAATGTAGGAGCCTGTGGCTCTGATGTTGTGGATGTGCAAACCAATACCAC 1069
Query 26214 CAGC 26217
| ||
Sbjct 1068 CTGC 1065
>seq30
Length=26055
Score = 95.1 bits (104), Expect = 6e-15
Identities = 191/275 (69%), Gaps = 10/275 (4%)
Strand=Plus/Plus
Query 25887 TATTTGGACAGAATAAATGCCAATCAGCATTTTGC--TCAACTTTCTCCATAAATAAATC 25944
||| ||| | |||||| ||| || || |||| |||| || | |||||| | |||
Sbjct 3044 TATCTGGTGAAAATAAACACCACTC--CAAGTTGCGTTCAATCTTTTGCATAAAGAGATC 3101
Query 25945 TGGAATCCACATTGCATAAAATAAATCTCTCGCTCTCATTTCTTCTTTTCCGTGATTCTT 26004
|| ||||| | || | || || |||| ||||||||||| || || ||||| || ||
Sbjct 3102 GGGTATCCATAGCGCTAAGAACAAGCCTCTAGCTCTCATTTCCTCCTTACCGTGGTTTTT 3161
Query 26005 TTTTAGATCTAAGAAATCAAAAATATCTGAGTGCCATGGTTCTAAATAGATAGCAAAA-- 26062
| | | ||| || || || |||| ||| ||||| || |||||||| ||| || ||
Sbjct 3162 TCTCAAATCCAAAAATTCGAAAACATCGCTATGCCAAGGCTCTAAATATATA-CAGAATG 3220
Query 26063 CTACCTTTTCTTTTTCCTCCACCTTGATCTACGTATCTTGCAGTTTCATTGAAA-ACTTT 26121
|| ||| ||||| || |||||||| || ||| ||| | | ||| ||| |||||
Sbjct 3221 CT-CCTGGCCTTTTGTTGCCGCCTTGATCGACATAT-TTGGCGGTGGATTCAAACACTTT 3278
Query 26122 CAACATTGGAACTAATCCAGTTGAAAATCCGTTTG 26156
| || ||||||||||| | || | |||||||
Sbjct 3279 TAGCAGAGGAACTAATCCGGAAGAGATACCGTTTG 3313
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 253038390191150
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |