Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pichia_20membranifaciens_20[genbank_20GCA_5F001950575.1_202016-12- 15] 522 sequences; 11,394,881 total letters Query= NC_020842.1 Length=79114 Score E Sequences producing significant alignments: (Bits) Value seq95 158 6e-34 seq30 95.1 6e-15 >seq95 Length=34527 Score = 158 bits (174), Expect = 6e-34 Identities = 219/304 (72%), Gaps = 2/304 (1%) Strand=Plus/Minus Query 25915 ATTTTGCTCAACTTTCTCCATAAATAAATCTGGAATCCACATTGCATAAAATAAATCTCT 25974 ||| ||||||||| ||| ||| || || || || ||||||| |||| || || ||||| Sbjct 1367 ATTCTGCTCAACTCTCTTCATGAACAAGTCAGGTATCCACAATGCAGGGAACAAGTCTCT 1308 Query 25975 CGCTCTCATTTCTTCTTTTCCGTGATTCTTTTTTAGATCTAAGAAATCAAAAATATCTGA 26034 ||||| |||||||| || ||||| |||||| | | || | ||| || || ||||| || Sbjct 1307 GGCTCTGATTTCTTCCTTACCGTGGTTCTTTCTCACGTCGATGAAGTCGAAGATATCGGA 1248 Query 26035 GTGCCATGGTTCTAAATAGATAGCAAAACTACCTTTTCTTTTTCCTCCACCTTGATCTAC 26094 ||||||||| || | ||||| ||||| |||| |||||| |||||||| || || Sbjct 1247 GTGCCATGGCTCAAGATAGAGCGCAAAGGCACCTGGTCTTTTGTTACCACCTTGGTCGAC 1188 Query 26095 GTATCTTGCAGTTTCATTGAAAACTTTCAACATTGGAACTAATCCAGTTGAAAAT-CCGT 26153 ||||| || || | |||||||| || |||||||| | || | |||| || | |||| Sbjct 1187 ATATCTGGCCGTGTTGTTGAAAACACGCATCATTGGAA-TGATACCGTTGGAAGTACCGT 1129 Query 26154 TTGTGCTATGAATCTTGGATCCTGTCGATCTAATATCGTGAGCATGAATACCGATTCCAC 26213 | || | ||| | ||| ||||| | ||| || | ||| || | ||| || |||| Sbjct 1128 TGGTACCTGCAATGTAGGAGCCTGTGGCTCTGATGTTGTGGATGTGCAAACCAATACCAC 1069 Query 26214 CAGC 26217 | || Sbjct 1068 CTGC 1065 >seq30 Length=26055 Score = 95.1 bits (104), Expect = 6e-15 Identities = 191/275 (69%), Gaps = 10/275 (4%) Strand=Plus/Plus Query 25887 TATTTGGACAGAATAAATGCCAATCAGCATTTTGC--TCAACTTTCTCCATAAATAAATC 25944 ||| ||| | |||||| ||| || || |||| |||| || | |||||| | ||| Sbjct 3044 TATCTGGTGAAAATAAACACCACTC--CAAGTTGCGTTCAATCTTTTGCATAAAGAGATC 3101 Query 25945 TGGAATCCACATTGCATAAAATAAATCTCTCGCTCTCATTTCTTCTTTTCCGTGATTCTT 26004 || ||||| | || | || || |||| ||||||||||| || || ||||| || || Sbjct 3102 GGGTATCCATAGCGCTAAGAACAAGCCTCTAGCTCTCATTTCCTCCTTACCGTGGTTTTT 3161 Query 26005 TTTTAGATCTAAGAAATCAAAAATATCTGAGTGCCATGGTTCTAAATAGATAGCAAAA-- 26062 | | | ||| || || || |||| ||| ||||| || |||||||| ||| || || Sbjct 3162 TCTCAAATCCAAAAATTCGAAAACATCGCTATGCCAAGGCTCTAAATATATA-CAGAATG 3220 Query 26063 CTACCTTTTCTTTTTCCTCCACCTTGATCTACGTATCTTGCAGTTTCATTGAAA-ACTTT 26121 || ||| ||||| || |||||||| || ||| ||| | | ||| ||| ||||| Sbjct 3221 CT-CCTGGCCTTTTGTTGCCGCCTTGATCGACATAT-TTGGCGGTGGATTCAAACACTTT 3278 Query 26122 CAACATTGGAACTAATCCAGTTGAAAATCCGTTTG 26156 | || ||||||||||| | || | ||||||| Sbjct 3279 TAGCAGAGGAACTAATCCGGAAGAGATACCGTTTG 3313 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 253038390191150