Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pichia_20membranifaciens_20[genbank_20GCA_5F001950575.1_202016-12- 15] 522 sequences; 11,394,881 total letters Query= NC_020845.1 Length=180977 Score E Sequences producing significant alignments: (Bits) Value seq67 179 4e-40 >seq67 Length=91683 Score = 179 bits (198), Expect = 4e-40 Identities = 282/397 (71%), Gaps = 14/397 (4%) Strand=Plus/Plus Query 138173 ATGTTTTGCTACACCAATAGGACCTACGCCAGGACCTCCACCTCCATGTGGAATACAGAA 138232 ||||| || |||| ||| ||||| || || ||||| ||||| ||||| ||||| || Sbjct 77051 ATGTTCAGCAACACAAATTGGACCAACACCCGGACCACCACCACCATGAGGAATTGCAAA 77110 Query 138233 TGTCTTATGTAAATTTAGATGACATACATCTGCACCATAGTCACATGGTTTTGCTAGACC 138292 ||||| || || || | ||||| ||||||||||| | |||| ||| | || ||| Sbjct 77111 GGTCTTGTGCAAGTTCAAGTGACAAACATCTGCACCCAAATCACCTGGAGAGGTTAAACC 77170 Query 138293 TACCTGTGCATTTAGATTTGCACCATCGAGATATACCTGACCACCATTGTCATGAACGAT 138352 || || || || | |||||||||||||| || ||||||||||||| | |||| ||| Sbjct 77171 AACTTGGGCGTTCATGTTTGCACCATCGAGGTAGACCTGACCACCATGCTGGTGAATGAT 77230 Query 138353 CTTACATATCTGTCTGATGTTTGTTTCAAATACACCATGAGTCGATGGATATGTAATCAT 138412 | |||| | ||| ||| ||| |||||||| ||||| ||| ||||||||||| | ||| Sbjct 77231 TTCACATGCGTCTCTAATGGTTGGTTCAAATAGACCATAAGTGGATGGATATGTGACCAT 77290 Query 138413 AATACATG---AGAGTTC-AAATG-TATTCATGATTGCTTTCTTCTCTAGATCTTTGATG 138467 |||| | || ||| | || | |||| | ||||||||| ||||||| | | Sbjct 77291 AATAGCGGCCAAGTTTTCGGAGTGCTTTTCA-GCTTGCTTTCT----CAGATCTTCAAGG 77345 Query 138468 TCTATGTTGCCAT--CATCATCACACTTGACACCTACAACTTTCATTCCTGCCATGACTG 138525 |||| || |||| | | | |||||||| | |||||||| || |||||| || Sbjct 77346 TCTAAATTACCATTGCTTAA--ACACTTGATTGGGATAACTTTCAAGCCAGCCATGGTTG 77403 Query 138526 CACTAGCAGGATTAGTTCCATGTGCTGACTCTGGTAT 138562 || ||||| || || || || ||||| |||| || Sbjct 77404 CAGATGCAGGGTTGGTACCGTGAGCTGAGACTGGAAT 77440 Score = 102 bits (112), Expect = 9e-17 Identities = 179/261 (69%), Gaps = 0/261 (0%) Strand=Plus/Plus Query 139821 ACAGTCTTCTTATCTCTTGTAGAATTATATGCTAACAGCATTGCCTCTGCTGCTGCAGTT 139880 ||| |||||||| |||||| | || |||| | | |||||||||||||||||| || Sbjct 78744 ACATTCTTCTTACCTCTTGACAAGTTGTATGAGAGAATCATTGCCTCTGCTGCTGCGGTA 78803 Query 139881 GCTTCATCTAATAGAGATGCGTTTGCTATTGGTAATCCTGTAAGTTCTGTGATGAGCGTT 139940 |||| || || | || ||||| || | || | || || | |||| | || || Sbjct 78804 CCTTCGTCCAACAATGACGCGTTGGCGACCGGCATCCCGGTCAAATCTGACACGACAGTC 78863 Query 139941 TGGTAATTGAATAAAGCTTCCAATCTTCCCTGAGATATCTCAGCTTGATAGGGAGTGTAA 140000 ||||| |||| ||| ||||||||| || || || | || || ||||| || ||||| Sbjct 78864 TGGTAGTTGAGCAAACTTTCCAATCTACCTTGGGAAACTTCCGCCTGATATGGGGTGTAC 78923 Query 140001 GATGTGTACCAACTAGGATTCTCAAGAACGTTTCGCTGTATGACTGGGGGTGTAATGGTT 140060 || |||||||| || || || | | ||||| || ||||| | || |||| Sbjct 78924 GAGGTGTACCACGCTGGGTTTTCCATCAAGTTTCTTTGGATGACAAGAGGCAACTTGGTG 78983 Query 140061 CCATAGTATCCTTGACCTATA 140081 || ||||| || | ||| ||| Sbjct 78984 CCGTAGTAACCCTTACCGATA 79004 Score = 87.8 bits (96), Expect = 2e-12 Identities = 178/260 (68%), Gaps = 6/260 (2%) Strand=Plus/Plus Query 139263 CCATCTGCACCATGATATGCTGCATAGAATCCAGACATATTTGCGAGCAGTGCTTGTGCT 139322 |||||| ||| || || |||| ||| | | ||||| || | || ||||| || Sbjct 78162 CCATCTAGACCGTGGTACACTGCGTAGTTGGCGGCGATATTAGCTAATAGCGCTTGGGCG 78221 Query 139323 GTGCAGATGTTACTGGTTGCTTTGTCTCTTCTAATATGCTGCTCTCTAGTTTGTAGTGCT 139382 || || ||||| |||||| || |||||| | ||||| || ||||||||||| | || Sbjct 78222 GTACAAATGTTGGAGGTTGCCTTTTCTCTTTTGATATGTTGTTCTCTAGTTTGCAAGGCC 78281 Query 139383 AATCTGTATGCAGGATTGCCTTCGCTGTCCACTGACTGACCTACAATTCTGCCAGGTATC 139442 | ||| | || || ||| | || ||| | ||| | | ||| || || ||| Sbjct 78282 AGTCTCAAAGCTGGCTTGTCCATTCTATCCTTGGTGATACCAATCAATCTACCTGGCATC 78341 Query 139443 TTTCTCT-TATA-CTTGTCTGTTG-TTGCAAAGAATGCAGCATGAGGACCTCCGTATCCC 139499 ||||||| || | ||| || || |||||||| ||||| |||||||| || | ||| Sbjct 78342 TTTCTCTGTAAAGCTT---TGGTGACAGCAAAGAAAGCAGCGTGAGGACCACCAAAACCC 78398 Query 139500 ATAGGAATACCAAACCTTTG 139519 || |||| ||| || ||||| Sbjct 78399 ATTGGAACACCGAATCTTTG 78418 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 578994622035440