Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pichia_20membranifaciens_20[genbank_20GCA_5F001950575.1_202016-12-
15] 522 sequences; 11,394,881 total letters
Query= NC_021247.1
Length=228750
Score E
Sequences producing significant alignments: (Bits) Value
seq138 129 9e-25
seq97 113 7e-20
>seq138
Length=17849
Score = 129 bits (142), Expect = 9e-25
Identities = 167/231 (72%), Gaps = 0/231 (0%)
Strand=Plus/Plus
Query 155820 AAAATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGAT 155879
|| |||||||| ||| | || || || ||||| || || ||||| || ||||||||| |
Sbjct 9498 AAGATGCAAATTTTTGTCAAGACCTTAACTGGTAAGACCATTACCTTGGAAGTCGAATCT 9557
Query 155880 TCTGATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAA 155939
||||| | ||| || || || | || || |||||||| ||||| || || || ||
Sbjct 9558 TCTGACACTATCGATAATGTCAAGCAAAAGATCCAAGATAAGGAAGGTATCCCACCTGAC 9617
Query 155940 CAACAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTAT 155999
|| |||||| | |||| |||||||||||| | |||||| |||||||| || || ||
Sbjct 9618 CAGCAAAGACTTATTTTTGCCGGTAAGCAATTAGAAGATGGTAGAACTTTGTCCGACTAC 9677
Query 156000 AATATATCCAAAGAGGCGACGCTTCATTTAGTGTTAAGATTAAGAGGCGGT 156050
|| || ||||| | || | || || || || ||||| ||||| |||
Sbjct 9678 AACATCCAAAAAGAATCAACCTTACACTTGGTCTTGAGATTGAGAGGTGGT 9728
>seq97
Length=66064
Score = 113 bits (124), Expect = 7e-20
Identities = 167/235 (71%), Gaps = 4/235 (2%)
Strand=Plus/Plus
Query 155819 TAAAATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGA 155878
||| |||||||| || | ||||| | || || || |||||||| | || || ||
Sbjct 5242 TAAGATGCAAATTTTCGTCAAAACCCTTACCGGTAAGACTATTACCCTTGAGGTTGAGTC 5301
Query 155879 TTCTGATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGA 155938
||| || | |||| || || || | ||||| ||||| || ||||| || || || ||
Sbjct 5302 TTCCGACACTATTGACAATGTCAAGCAAAAAATCCAAGACAAGGAAGGTATTCCACCTGA 5361
Query 155939 ACAACAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTA 155998
|| ||||||||||| | || |||||||| | |||||| ||||||||||| || ||
Sbjct 5362 CCAGCAAAGATTGATCTTCGCTGGTAAGCAATTGGAAGATGGTAGAACTTTATCCGACTA 5421
Query 155999 TAATATATCCAAA--GAGGCGACGCTTCATTTAGTGTTAAGATTAAGAGGCGGTG 156051
| | ||||||| || | || | || || || |||||||| ||||| ||||
Sbjct 5422 CA--ACATCCAAAAGGAATCCACTTTGCACTTGGTCTTAAGATTGAGAGGTGGTG 5474
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 731867224535200
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |