Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pichia_20membranifaciens_20[genbank_20GCA_5F001950575.1_202016-12- 15] 522 sequences; 11,394,881 total letters Query= NC_021248.1 Length=307691 Score E Sequences producing significant alignments: (Bits) Value seq138 147 4e-30 >seq138 Length=17849 Score = 147 bits (162), Expect = 4e-30 Identities = 177/241 (73%), Gaps = 0/241 (0%) Strand=Plus/Minus Query 192299 GTTTAATAATACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATAT 192358 ||| ||| ||||||||||| | | || || || ||||| || | ||||| ||| | Sbjct 9738 GTTCAATGATACCACCTCTCAATCTCAAGACCAAGTGTAAGGTTGATTCTTTTTGGATGT 9679 Query 192359 TATAATCAGATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTT 192418 | || || || || |||| |||| || ||||| ||||| ||||| || | ||| || | Sbjct 9678 TGTAGTCGGACAAAGTTCTACCATCTTCTAATTGCTTACCGGCAAAAATAAGTCTTTGCT 9619 Query 192419 GATCAGGTGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTG 192478 | |||||||| || ||||| |||||||| || || | || |||||| |||| || | Sbjct 9618 GGTCAGGTGGGATACCTTCCTTATCTTGGATCTTTTGCTTGACATTATCGATAGTGTCAG 9559 Query 192479 ACGATTCTACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCATTT 192538 | ||||| ||||| | |||||||| ||||||||||| || || | ||| || ||||| | Sbjct 9558 AAGATTCGACTTCCAAGGTAATGGTCTTACCAGTTAAGGTCTTGACAAAAATTTGCATCT 9499 Query 192539 T 192539 | Sbjct 9498 T 9498 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 984473415674700