Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pichia_20membranifaciens_20[genbank_20GCA_5F001950575.1_202016-12- 15] 522 sequences; 11,394,881 total letters Query= NC_021249.1 Length=282895 Score E Sequences producing significant alignments: (Bits) Value seq138 147 4e-30 seq97 136 7e-27 >seq138 Length=17849 Score = 147 bits (162), Expect = 4e-30 Identities = 174/236 (74%), Gaps = 0/236 (0%) Strand=Plus/Minus Query 171837 ATAATACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAA 171896 || ||||||||||| | || || || || ||||| || | ||||| || || || Sbjct 9733 ATGATACCACCTCTCAATCTCAAGACCAAGTGTAAGGTTGATTCTTTTTGGATGTTGTAG 9674 Query 171897 TCTGATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCA 171956 || || |||| || | || || ||||| ||||| |||||||| | ||| || |||||| Sbjct 9673 TCGGACAAAGTTCTACCATCTTCTAATTGCTTACCGGCAAAAATAAGTCTTTGCTGGTCA 9614 Query 171957 GGTGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGAT 172016 ||||| || ||||| |||||||| || || | || |||||| ||||| || || ||| Sbjct 9613 GGTGGGATACCTTCCTTATCTTGGATCTTTTGCTTGACATTATCGATAGTGTCAGAAGAT 9554 Query 172017 TCTACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCATTTT 172072 || ||||| | |||||||| ||||||||||| || || | || || ||||| || Sbjct 9553 TCGACTTCCAAGGTAATGGTCTTACCAGTTAAGGTCTTGACAAAAATTTGCATCTT 9498 >seq97 Length=66064 Score = 136 bits (150), Expect = 7e-27 Identities = 174/240 (73%), Gaps = 0/240 (0%) Strand=Plus/Minus Query 171834 TTCATAATACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTA 171893 ||| || ||||||||| | || ||| || || || ||||| | || || || || Sbjct 5481 TTCTTACCACCACCTCTCAATCTTAAGACCAAGTGCAAAGTGGATTCCTTTTGGATGTTG 5422 Query 171894 TAATCTGATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGG 171953 || || ||||||| || | || |||||||| |||||||| || || ||||| || ||| Sbjct 5421 TAGTCGGATAAAGTTCTACCATCTTCCAATTGCTTACCAGCGAAGATCAATCTTTGCTGG 5362 Query 171954 TCAGGTGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGAC 172013 |||||||| || ||||| || ||||| ||||| | || ||||| ||||| || || Sbjct 5361 TCAGGTGGAATACCTTCCTTGTCTTGGATTTTTTGCTTGACATTGTCAATAGTGTCGGAA 5302 Query 172014 GATTCTACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCATTTTA 172073 || || || || || ||||| || ||||| || | ||||| | ||| || ||||| ||| Sbjct 5301 GACTCAACCTCAAGGGTAATAGTCTTACCGGTAAGGGTTTTGACGAAAATTTGCATCTTA 5242 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 905130093987600