Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pichia_20membranifaciens_20[genbank_20GCA_5F001950575.1_202016-12- 15] 522 sequences; 11,394,881 total letters Query= NC_021312.1 Length=459984 Score E Sequences producing significant alignments: (Bits) Value seq95 131 5e-25 seq46 87.8 5e-12 seq12 87.8 5e-12 >seq95 Length=34527 Score = 131 bits (144), Expect = 5e-25 Identities = 558/876 (64%), Gaps = 7/876 (1%) Strand=Plus/Minus Query 155631 TATTCTACAATCTCACAGCACAGGTTAGAACTCTTGATGGTGCCTAAATTCTTCTGGTTA 155690 ||||| ||||||||||| |||| ||| ||| ||||| | || || |||| ||||| Sbjct 1636 TATTCGACAATCTCACAACACAAGTTGGAAGATTTGATCATACCCAAGTTCTGTTGGTTG 1577 Query 155691 GATTTACTGTTACAAGCATCCTTGTATAGAATGTATGGGGTTCCTGTCTCCATCTGTGCG 155750 ||||| ||||||| || |||||||| || ||| | || || || || || | || || Sbjct 1576 GATTTTGTGTTACATGCGTCCTTGTAGAGCATGAAAGGAGTACCCGTTTCAGTTTGGGCT 1517 Query 155751 TCCAGAATCTTTAGCCAGAGGTCACGGGCATTAATTTGCTTGTTGTATCTGCCTTCCGAC 155810 |||| ||| ||| | | | || || || ||| | |||| ||| Sbjct 1516 TCCAAGATCGAGTACCACAACTTTTGTGCCTTGATGGTCTTTCTACCTCTGTTTTCTCTT 1457 Query 155811 TCATATTTCATATACAGCGTTCGGTAATCCTCACCGTAACAATCACTCAGTCCAGGGCAC 155870 || ||||| |||| ||| | | | || |||||||| || || || ||| | Sbjct 1456 TCGTATTTTGTATATAGCTCTTCGAACTCGTCACCGTAGACGTCGGACAAGCCTGGGACC 1397 Query 155871 TTATCGGGGCAAAACAGCGACCAAATTTTATTACCGATTA-CACGCTCCATAAATACATC 155929 | | ||| | || || | ||| | ||| | | | | | | || ||| || | || Sbjct 1396 TCACTTGGGGAGAAAAGAGTCCATTCCTGATT-CTGCTCAACTCTCTTCATGAACAAGTC 1338 Query 155930 ACTCGCCCAAATAGCATAGAAAAGGTCCCTTGCCTTTGACTCCT-CATCGCCGTGATTCT 155988 | ||| | ||| ||| | ||| || || | ||| | || | | ||||| |||| Sbjct 1337 AGGTATCCACAATGCAGGGAACAAGTCTCTGGC-TCTGATTTCTTCCTTACCGTGGTTCT 1279 Query 155989 TCCGTAGCTCTAAGAATTCCTCAATATCAGGATGGTGTGGCTCCAGATACATAGCAAAAC 156048 | | | || | ||| || ||||| | || |||||| ||||| | ||||| Sbjct 1278 TTCTCACGTCGATGAAGTCGAAGATATCGGAGTGCCATGGCTCAAGATAGAGCGCAAAGG 1219 Query 156049 TACCATTCCTCTTG---CCACCCTGATCTACATACCGAGCAGTCTTATTGAAGACACCTA 156105 ||| || ||| ||||| || || ||||| | || || || ||||| |||| | Sbjct 1218 CACCTGGTCTTTTGTTACCACCTTGGTCGACATATCTGGCCGTGTTGTTGAAAACACGCA 1159 Query 156106 GCATAGGAATAATACCATTGGAAGTGCCATTGGTTCCGCGAATATGCGAACCAGATGAGC 156165 ||| ||||| ||||| |||||||| || ||||| || ||| | || || | | | Sbjct 1158 TCATTGGAATGATACCGTTGGAAGTACCGTTGGTACCTGCAATGTAGGAGCCTGTGGCTC 1099 Query 156166 GAACATTATGAATATGTAGTCCAATACCACCTGACCATTTAGAAATTTGAGCGCATTCCT 156225 | || || || || | ||||||||||||| || || || | || || | | Sbjct 1098 TGATGTTGTGGATGTGCAAACCAATACCACCTGCGGTCTTGGAGATCAGCGCACACTGTT 1039 Query 156226 TTACAGTATTGAAAATACCTTCAATAGAATCATCTTCCATTGATAGTAGATAGCACGAAC 156285 | | ||| | | | ||||| ||||| |||||||||| ||||| | | | || || Sbjct 1038 TCAAAGTGTCGTAGATACCCTCAATCGAATCATCTTGCATTGCGACCAAGAAACAGGAGG 979 Query 156286 TTAATTGAGGTCGTGGTGTTCCAGCGTTGAATAGTGTAGGTGTTGCATGAATAAAATACT 156345 | || || ||| || || |||||||| | ||||| | || ||| | || || Sbjct 978 ACATCTGGTTTCTTGGGGTACCTGCGTTGAACAAGGTAGGAGAAGCGTGAGTGAAGTATC 919 Query 156346 TATTAGACATATAATCGTATGTCTCCTTAATCTTCTCAAGATTAGACCCGTGAATACAGA 156405 | |||||||| | | ||| ||||| | |||||| | |||||||||| || Sbjct 918 TCTTAGACATCAAGTTGTAGGTCTCGATGGCGCTCTCAATGTCGTCGCCGTGAATACCGA 859 Query 156406 TAGAGACCCTCATCCACATATGCTGAGGACGCTCTACAATCACTCCATCAATTCGCAGAA 156465 || ||| ||||| || ||||| || | || ||||| ||||| | || || || Sbjct 858 CAGCGACTCTCATGATCAAGTGCTGGGGTCTTTCCGCAATCTTGCCATCCAATCTCAAAA 799 Query 156466 GGTATGCGCGTTCCAGAGTTTTAAACCCGAAATAAT 156501 |||| | | || || || || || ||||| |||| Sbjct 798 GGTAGGATCTCTCGAGGGTCTTGAAGCCGAAGTAAT 763 >seq46 Length=191907 Score = 87.8 bits (96), Expect = 5e-12 Identities = 96/127 (76%), Gaps = 3/127 (2%) Strand=Plus/Plus Query 301815 AATTTCTTCAATACGGGGAACACCACGGGTTACGTTAGACTTGGACGCAACACCAGCAAA 301874 |||||| | ||||||||||||||| ||| || || | |||| |||||||||||||| Sbjct 43628 AATTTCCTTAATACGGGGAACACCCAAGGTAACATT---CATGGAAGCAACACCAGCAAA 43684 Query 301875 GTGGAAAGTATTCAGAGTTAATTGAGTAGTTGGCTCACCAATACTTTGTGCCGCAATCAT 301934 |||||||| || | ||| | ||| || || ||||||||| ||||| ||||| Sbjct 43685 ATGGAAAGTCTTTAAAGTCATTTGGGTTCCAGGTTCACCAATAGAATGTGCACCAATCGC 43744 Query 301935 ACCAACC 301941 ||||||| Sbjct 43745 ACCAACC 43751 >seq12 Length=164003 Score = 87.8 bits (96), Expect = 5e-12 Identities = 120/168 (71%), Gaps = 0/168 (0%) Strand=Plus/Plus Query 302553 ATCATAACCAATCATAATGTCTTCCATACTCTTGATTAAACGACGCTGAATATAACCAGT 302612 |||||| || ||| || ||||||| ||| | ||||| | || ||||||||||| Sbjct 52554 ATCATAGTGAACCATGATATCTTCCAATGCCTTTAACAAACGTCTTTGGATATAACCAGT 52613 Query 302613 TGTAGATGTTTTTACAGCTGTATCAATTAGACCAACACGACCACCCATAGCATGGAAGAA 302672 | | || || || || |||||||| | ||| | | |||| ||||||| ||||| || Sbjct 52614 TTCCGCAGTCTTAACCGCAGTATCAATCAAACCTTCTCTACCAGCCATAGCGTGGAAAAA 52673 Query 302673 TAGCTCTTCCGGTCGTAGCCCCCCAATAAAGGAGCTCTCAACGAAACC 302720 | |||| ||| |||||||| | | | ||| ||||||||||||| Sbjct 52674 GAATTCTTGCGGAGTTAGCCCCCTCAAATAAGAGTTCTCAACGAAACC 52721 Score = 86.0 bits (94), Expect = 2e-11 Identities = 104/141 (74%), Gaps = 3/141 (2%) Strand=Plus/Plus Query 301812 CAGAATTTCTTCAATACGGGGAACACCACGGGTTACGTTAGACTTGGACGCAACACCAGC 301871 || |||||| | | ||| |||||||| || ||||| ||||| | |||||||| Sbjct 51795 CAAAATTTCCTTTAAACGTGGAACACCCAAAGTAACGTTT---TTGGAGGAGACACCAGC 51851 Query 301872 AAAGTGGAAAGTATTCAGAGTTAATTGAGTAGTTGGCTCACCAATACTTTGTGCCGCAAT 301931 | | ||||||||||||| ||| | ||| || | |||||||||||| ||| || |||| Sbjct 51852 ATAATGGAAAGTATTCAAAGTCATTTGGGTTGCAGGCTCACCAATAGATTGAGCAGCAAC 51911 Query 301932 CATACCAACCATTTCTCCTGG 301952 | ||||||||||| || || Sbjct 51912 AACTCCAACCATTTCACCGGG 51932 Score = 86.0 bits (94), Expect = 2e-11 Identities = 134/191 (70%), Gaps = 3/191 (2%) Strand=Plus/Plus Query 303628 TGGGGCATATGTAAATTCATCTCATCACCGTCAAAATCAGCATTATACGGCTTTGTGTCC 303687 || || | ||| |||||||| |||||||| || ||||| ||||| || ||| |||| | Sbjct 53629 TGAGGGACATGCAAATTCATTTCATCACCATCGAAATCTGCATTGTAAGGCGATGTGACA 53688 Query 303688 GCAACGTTCATCCGGAAAGTATCACCCTGCATCATAACACGGGCTTTATGACACATCATA 303747 | | ||||| ||||| || | |||| ||| | | |||||||||||||| Sbjct 53689 GATAAATTCATTCGGAATGTGGAATATGGCAT---AACTCTCACCCTATGACACATCATA 53745 Query 303748 GACATTCTGTGTAGAGTTGGCTGACGATTGAAAAGCACGGGGTCACCGTTTAATACATGA 303807 ||||| | |||| || |||||||||||||| | || || ||| | | || |||| Sbjct 53746 GACATCTTATGTAAAGAAGGCTGACGATTGAATAAAACTGGATCATTATCCATTAAATGA 53805 Query 303808 CGATGAACCTT 303818 || | ||| || Sbjct 53806 CGCTCAACTTT 53816 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1471807756299914