Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pichia_20membranifaciens_20[genbank_20GCA_5F001950575.1_202016-12-
15] 522 sequences; 11,394,881 total letters
Query= NC_021312.1
Length=459984
Score E
Sequences producing significant alignments: (Bits) Value
seq95 131 5e-25
seq46 87.8 5e-12
seq12 87.8 5e-12
>seq95
Length=34527
Score = 131 bits (144), Expect = 5e-25
Identities = 558/876 (64%), Gaps = 7/876 (1%)
Strand=Plus/Minus
Query 155631 TATTCTACAATCTCACAGCACAGGTTAGAACTCTTGATGGTGCCTAAATTCTTCTGGTTA 155690
||||| ||||||||||| |||| ||| ||| ||||| | || || |||| |||||
Sbjct 1636 TATTCGACAATCTCACAACACAAGTTGGAAGATTTGATCATACCCAAGTTCTGTTGGTTG 1577
Query 155691 GATTTACTGTTACAAGCATCCTTGTATAGAATGTATGGGGTTCCTGTCTCCATCTGTGCG 155750
||||| ||||||| || |||||||| || ||| | || || || || || | || ||
Sbjct 1576 GATTTTGTGTTACATGCGTCCTTGTAGAGCATGAAAGGAGTACCCGTTTCAGTTTGGGCT 1517
Query 155751 TCCAGAATCTTTAGCCAGAGGTCACGGGCATTAATTTGCTTGTTGTATCTGCCTTCCGAC 155810
|||| ||| ||| | | | || || || ||| | |||| |||
Sbjct 1516 TCCAAGATCGAGTACCACAACTTTTGTGCCTTGATGGTCTTTCTACCTCTGTTTTCTCTT 1457
Query 155811 TCATATTTCATATACAGCGTTCGGTAATCCTCACCGTAACAATCACTCAGTCCAGGGCAC 155870
|| ||||| |||| ||| | | | || |||||||| || || || ||| |
Sbjct 1456 TCGTATTTTGTATATAGCTCTTCGAACTCGTCACCGTAGACGTCGGACAAGCCTGGGACC 1397
Query 155871 TTATCGGGGCAAAACAGCGACCAAATTTTATTACCGATTA-CACGCTCCATAAATACATC 155929
| | ||| | || || | ||| | ||| | | | | | | || ||| || | ||
Sbjct 1396 TCACTTGGGGAGAAAAGAGTCCATTCCTGATT-CTGCTCAACTCTCTTCATGAACAAGTC 1338
Query 155930 ACTCGCCCAAATAGCATAGAAAAGGTCCCTTGCCTTTGACTCCT-CATCGCCGTGATTCT 155988
| ||| | ||| ||| | ||| || || | ||| | || | | ||||| ||||
Sbjct 1337 AGGTATCCACAATGCAGGGAACAAGTCTCTGGC-TCTGATTTCTTCCTTACCGTGGTTCT 1279
Query 155989 TCCGTAGCTCTAAGAATTCCTCAATATCAGGATGGTGTGGCTCCAGATACATAGCAAAAC 156048
| | | || | ||| || ||||| | || |||||| ||||| | |||||
Sbjct 1278 TTCTCACGTCGATGAAGTCGAAGATATCGGAGTGCCATGGCTCAAGATAGAGCGCAAAGG 1219
Query 156049 TACCATTCCTCTTG---CCACCCTGATCTACATACCGAGCAGTCTTATTGAAGACACCTA 156105
||| || ||| ||||| || || ||||| | || || || ||||| |||| |
Sbjct 1218 CACCTGGTCTTTTGTTACCACCTTGGTCGACATATCTGGCCGTGTTGTTGAAAACACGCA 1159
Query 156106 GCATAGGAATAATACCATTGGAAGTGCCATTGGTTCCGCGAATATGCGAACCAGATGAGC 156165
||| ||||| ||||| |||||||| || ||||| || ||| | || || | | |
Sbjct 1158 TCATTGGAATGATACCGTTGGAAGTACCGTTGGTACCTGCAATGTAGGAGCCTGTGGCTC 1099
Query 156166 GAACATTATGAATATGTAGTCCAATACCACCTGACCATTTAGAAATTTGAGCGCATTCCT 156225
| || || || || | ||||||||||||| || || || | || || | |
Sbjct 1098 TGATGTTGTGGATGTGCAAACCAATACCACCTGCGGTCTTGGAGATCAGCGCACACTGTT 1039
Query 156226 TTACAGTATTGAAAATACCTTCAATAGAATCATCTTCCATTGATAGTAGATAGCACGAAC 156285
| | ||| | | | ||||| ||||| |||||||||| ||||| | | | || ||
Sbjct 1038 TCAAAGTGTCGTAGATACCCTCAATCGAATCATCTTGCATTGCGACCAAGAAACAGGAGG 979
Query 156286 TTAATTGAGGTCGTGGTGTTCCAGCGTTGAATAGTGTAGGTGTTGCATGAATAAAATACT 156345
| || || ||| || || |||||||| | ||||| | || ||| | || ||
Sbjct 978 ACATCTGGTTTCTTGGGGTACCTGCGTTGAACAAGGTAGGAGAAGCGTGAGTGAAGTATC 919
Query 156346 TATTAGACATATAATCGTATGTCTCCTTAATCTTCTCAAGATTAGACCCGTGAATACAGA 156405
| |||||||| | | ||| ||||| | |||||| | |||||||||| ||
Sbjct 918 TCTTAGACATCAAGTTGTAGGTCTCGATGGCGCTCTCAATGTCGTCGCCGTGAATACCGA 859
Query 156406 TAGAGACCCTCATCCACATATGCTGAGGACGCTCTACAATCACTCCATCAATTCGCAGAA 156465
|| ||| ||||| || ||||| || | || ||||| ||||| | || || ||
Sbjct 858 CAGCGACTCTCATGATCAAGTGCTGGGGTCTTTCCGCAATCTTGCCATCCAATCTCAAAA 799
Query 156466 GGTATGCGCGTTCCAGAGTTTTAAACCCGAAATAAT 156501
|||| | | || || || || || ||||| ||||
Sbjct 798 GGTAGGATCTCTCGAGGGTCTTGAAGCCGAAGTAAT 763
>seq46
Length=191907
Score = 87.8 bits (96), Expect = 5e-12
Identities = 96/127 (76%), Gaps = 3/127 (2%)
Strand=Plus/Plus
Query 301815 AATTTCTTCAATACGGGGAACACCACGGGTTACGTTAGACTTGGACGCAACACCAGCAAA 301874
|||||| | ||||||||||||||| ||| || || | |||| ||||||||||||||
Sbjct 43628 AATTTCCTTAATACGGGGAACACCCAAGGTAACATT---CATGGAAGCAACACCAGCAAA 43684
Query 301875 GTGGAAAGTATTCAGAGTTAATTGAGTAGTTGGCTCACCAATACTTTGTGCCGCAATCAT 301934
|||||||| || | ||| | ||| || || ||||||||| ||||| |||||
Sbjct 43685 ATGGAAAGTCTTTAAAGTCATTTGGGTTCCAGGTTCACCAATAGAATGTGCACCAATCGC 43744
Query 301935 ACCAACC 301941
|||||||
Sbjct 43745 ACCAACC 43751
>seq12
Length=164003
Score = 87.8 bits (96), Expect = 5e-12
Identities = 120/168 (71%), Gaps = 0/168 (0%)
Strand=Plus/Plus
Query 302553 ATCATAACCAATCATAATGTCTTCCATACTCTTGATTAAACGACGCTGAATATAACCAGT 302612
|||||| || ||| || ||||||| ||| | ||||| | || |||||||||||
Sbjct 52554 ATCATAGTGAACCATGATATCTTCCAATGCCTTTAACAAACGTCTTTGGATATAACCAGT 52613
Query 302613 TGTAGATGTTTTTACAGCTGTATCAATTAGACCAACACGACCACCCATAGCATGGAAGAA 302672
| | || || || || |||||||| | ||| | | |||| ||||||| ||||| ||
Sbjct 52614 TTCCGCAGTCTTAACCGCAGTATCAATCAAACCTTCTCTACCAGCCATAGCGTGGAAAAA 52673
Query 302673 TAGCTCTTCCGGTCGTAGCCCCCCAATAAAGGAGCTCTCAACGAAACC 302720
| |||| ||| |||||||| | | | ||| |||||||||||||
Sbjct 52674 GAATTCTTGCGGAGTTAGCCCCCTCAAATAAGAGTTCTCAACGAAACC 52721
Score = 86.0 bits (94), Expect = 2e-11
Identities = 104/141 (74%), Gaps = 3/141 (2%)
Strand=Plus/Plus
Query 301812 CAGAATTTCTTCAATACGGGGAACACCACGGGTTACGTTAGACTTGGACGCAACACCAGC 301871
|| |||||| | | ||| |||||||| || ||||| ||||| | ||||||||
Sbjct 51795 CAAAATTTCCTTTAAACGTGGAACACCCAAAGTAACGTTT---TTGGAGGAGACACCAGC 51851
Query 301872 AAAGTGGAAAGTATTCAGAGTTAATTGAGTAGTTGGCTCACCAATACTTTGTGCCGCAAT 301931
| | ||||||||||||| ||| | ||| || | |||||||||||| ||| || ||||
Sbjct 51852 ATAATGGAAAGTATTCAAAGTCATTTGGGTTGCAGGCTCACCAATAGATTGAGCAGCAAC 51911
Query 301932 CATACCAACCATTTCTCCTGG 301952
| ||||||||||| || ||
Sbjct 51912 AACTCCAACCATTTCACCGGG 51932
Score = 86.0 bits (94), Expect = 2e-11
Identities = 134/191 (70%), Gaps = 3/191 (2%)
Strand=Plus/Plus
Query 303628 TGGGGCATATGTAAATTCATCTCATCACCGTCAAAATCAGCATTATACGGCTTTGTGTCC 303687
|| || | ||| |||||||| |||||||| || ||||| ||||| || ||| |||| |
Sbjct 53629 TGAGGGACATGCAAATTCATTTCATCACCATCGAAATCTGCATTGTAAGGCGATGTGACA 53688
Query 303688 GCAACGTTCATCCGGAAAGTATCACCCTGCATCATAACACGGGCTTTATGACACATCATA 303747
| | ||||| ||||| || | |||| ||| | | ||||||||||||||
Sbjct 53689 GATAAATTCATTCGGAATGTGGAATATGGCAT---AACTCTCACCCTATGACACATCATA 53745
Query 303748 GACATTCTGTGTAGAGTTGGCTGACGATTGAAAAGCACGGGGTCACCGTTTAATACATGA 303807
||||| | |||| || |||||||||||||| | || || ||| | | || ||||
Sbjct 53746 GACATCTTATGTAAAGAAGGCTGACGATTGAATAAAACTGGATCATTATCCATTAAATGA 53805
Query 303808 CGATGAACCTT 303818
|| | ||| ||
Sbjct 53806 CGCTCAACTTT 53816
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1471807756299914
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |