Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pichia_20membranifaciens_20[genbank_20GCA_5F001950575.1_202016-12-
15] 522 sequences; 11,394,881 total letters
Query= NC_021858.1
Length=1908524
Score E
Sequences producing significant alignments: (Bits) Value
seq183 129 7e-24
seq95 109 7e-18
seq120 102 1e-15
seq60 89.7 6e-12
>seq183
Length=27355
Score = 129 bits (142), Expect = 7e-24
Identities = 207/294 (70%), Gaps = 9/294 (3%)
Strand=Plus/Minus
Query 869174 TGCGAACCTTCGTCGCGACTGATCATTTCGTTGCTAAAGGCGAGGCCGGGCATGAGGCCG 869233
||| | || ||||| |||| ||||| ||||| || | | |||||||||||| ||
Sbjct 26496 TGCAAGCCCTCGTCCCGACAGATCAACTCGTTCGAGAACGTCAAGCCGGGCATGAGCCCC 26437
Query 869234 CGCTTCTTGAGCCAAAAGATGG-CGCAGAAACTGCCCGAGAAAAAGATGCCCTCGACGGC 869292
|||||||| | ||| ||||| | |||| || ||||||||| || || ||||| |||||
Sbjct 26436 CGCTTCTTCAACCAGAAGATCGACGCA-AACGAGCCCGAGAAGAAAATCCCCTCCACGGC 26378
Query 869293 GGCAAAGCCGATGAGCCGCTCGGCAAAGGTGTCGAGGC--CCTCCTTGTTGATCCACTTC 869350
|||||| | | | |||||| |||| | | || ||| | ||||||||| |
Sbjct 26377 GGCAAACGCCACCAAGCGCTCGCCAAA-----CAACGCATCCTTGTCGTTGATCCATCTG 26323
Query 869351 ATCGCCCAGTCGGCCTTTTTCCTCACCGACGGCACCGTGTCGATGGCGCGAAAGAGGTGG 869410
| |||||| |||||||| | | | | |||| | | ||||| ||| |||||||
Sbjct 26322 AGCGCCCACTCGGCCTTCTCCTTGATGCACGGGATGTTATCGATCGCGTTGAAGAGGTAC 26263
Query 869411 TCCTTTTCGGCCGGGTCCTTGACATAGGTGTCGATCAGGAGCGAATAGGTCTCC 869464
|| || || ||| ||||| || || |||||||||| | ||| || ||||||
Sbjct 26262 TCGTTCTCCTTCGGATCCTTCACGTACGTGTCGATCAACAACGAGTACGTCTCC 26209
Score = 116 bits (128), Expect = 5e-20
Identities = 210/303 (69%), Gaps = 8/303 (3%)
Strand=Plus/Minus
Query 868709 ACGCGCCGCTCGAAAAAGTTGGTCTTGCCCTCGAGCGAGATCAACTCCATCCACGGGAAC 868768
|| ||| |||||| |||||||| ||||| | ||||| || |||||| | |||
Sbjct 26787 ACCCGCTTCTCGAAGAAGTTGGTTTTGCCGGCAAGCGAAATGTTCTCCATGAAATCGAAT 26728
Query 868769 GGGTTGGGCGTCTTGTAGTGCTTTTCGCATCCGAGCGACGCGAGCAGGCGGTCGGCGACA 868828
||||||| ||||||||||| ||||| ||||| | | | || |||||||||||||
Sbjct 26727 GGGTTGGTGACGTTGTAGTGCTTGTCGCAGCCGAGGGCGACAAACAAGCGGTCGGCGACA 26668
Query 868829 AACTCGATGTACTGGCACATGAGGCCGGCGTTCATGCCGATGAGCGCCACCGGCAGCGAC 868888
||||||| |||||||||||| | | | ||||||||| | | || |||| |
Sbjct 26667 AACTCGACGTACTGGCACATCAAGTCCTTGTTCATGCCCAACAAGTTGACGGGCAAGGCG 26608
Query 868889 TCGCTCACAAACTCTTTCTCGATCTCGACGGCCTCGACGATGATCTGCCTGGGCA--CG- 868945
|| | | | |||||||| || ||||||||| |||||||| | || || ||
Sbjct 26607 TCAGTGAAGTAGCGCTTCTCGATATCAACGGCCTCGGTGATGATCTTGC-GGACAATCGT 26549
Query 868946 -TCGGCCGAGGGCTTGTTGACGAGCATCGTGTAGAGCAGGCAGGCAAAGTCGCAGTGCAA 869004
||| ||| || || || | | | || | | | || ||||||||||||| ||||||
Sbjct 26548 CTCGTCCGGGGTGTTATTCAGGTG---CGAGAACAACAAGCAGGCAAAGTCGGTGTGCAA 26492
Query 869005 CCC 869007
||
Sbjct 26491 GCC 26489
>seq95
Length=34527
Score = 109 bits (120), Expect = 7e-18
Identities = 139/189 (74%), Gaps = 2/189 (1%)
Strand=Plus/Minus
Query 1630066 TGGTCGACGTAGCGCGCCGTGTCGTTAAAGACGCGGAGCATGGGCACGAGGCCGTTGGAC 1630125
|||||||| || | ||||||| ||| || || || | ||| || | || ||||||||
Sbjct 1195 TGGTCGACATATCTGGCCGTGTTGTTGAAAACACGCATCATTGGAATGATACCGTTGGAA 1136
Query 1630126 TCGCCGTTGGTGCCCGCCACGTAGGCGCCGGCGGCGCGCACCTTGTGCGCG-GCAAAGCC 1630184
|||||||| || || | ||||| ||| | ||| | | ||||| | ||||| ||
Sbjct 1135 GTACCGTTGGTACCTGCAATGTAGGAGCCTGTGGCTCTGATGTTGTGGATGTGCAAA-CC 1077
Query 1630185 GATGCCGCCGGCCGACTTGGAGATGAGCGCGCACTGTTTGAGCGTGTCGTAGATGCCCTC 1630244
|| || || || | ||||||||| ||||| |||||||| | ||||||||||| |||||
Sbjct 1076 AATACCACCTGCGGTCTTGGAGATCAGCGCACACTGTTTCAAAGTGTCGTAGATACCCTC 1017
Query 1630245 GATCGAGTC 1630253
||||| ||
Sbjct 1016 AATCGAATC 1008
>seq120
Length=74726
Score = 102 bits (112), Expect = 1e-15
Identities = 257/385 (67%), Gaps = 13/385 (3%)
Strand=Plus/Plus
Query 1573866 GACGGCGACATGCCCAACCTCTTGCTG-GCGGGTCCGCCCGGCACGGGCAAGACCACGAG 1573924
||||| || ||||| |||| | || ||||||| |||||| | || ||||| ||| |
Sbjct 38187 GACGGAAACCTGCCCCACCTGATCTTGAGCGGGTC-GCCCGGAATCGGGAAGACGACG-G 38244
Query 1573925 CATCGCG-TGTCTGGCGCGTGTCCT-CTTGGGCGCGGCCGCCGAC--------GAGGCCG 1573974
| || ||||| ||| | | || |||||| || || ||| |||||||
Sbjct 38245 CGGTGCTCTGTCTTGCGAGAGAGCTTCTTGGGGACGACCCGAGACTGCTGAAGGAGGCCG 38304
Query 1573975 TGCTCGAACTCAACGCGTCGGACGAGCGCGGCGTCGACGTCGTGCGCAAGATCATCAAGC 1574034
|||| || | |||||||||||||| || ||| ||||| | || || || || ||||||
Sbjct 38305 TGCTTGAGTTGAACGCGTCGGACGACCGAGGCATCGACATTGTACGGAACATGATCAAGA 38364
Query 1574035 ACCACGCCTCCAAGAGGATCGACCTGCCGCCCGGACGCCACAAGGTGATCATCCTCGACG 1574094
|| |||| | || ||||| | || |||||| | |||| || ||||
Sbjct 38365 CTTTTGCACAGAAGAAGGTCACGCTGCCATACAACCGGCACAAGATTGTCATTCTGGACG 38424
Query 1574095 AGGCCGACTGCCTCACGTCGGCGGCCCAGCAGGCCCTGCGGTCCACCATGGAAAAGCACA 1574154
|||| |||| | ||| || || |||||||| ||| | || ||||| | ||
Sbjct 38425 AGGCGGACTCGATTACGGCGAGTGCGCAGCAGGCGCTGAGACGGACGATGGAGATCTACT 38484
Query 1574155 CCAACACGACGCGCTTTGCCCTGGCGTGCAACACGTCGTCGATGGTCATCGAGGCCCTCC 1574214
| |||| ||||| |||| | | |||||||| |||| | | |||||||| | | |
Sbjct 38485 CGAACAGTACGCGGTTTGTCTTCTCGTGCAACCAGTCGAACAAGATCATCGAGCCGTTGC 38544
Query 1574215 AAAGTCGCTGCGCCATTCTGCGCTT 1574239
| ||||| ||| |||| |||| ||
Sbjct 38545 AGAGTCGGTGCTCCATCTTGCGGTT 38569
>seq60
Length=60384
Score = 89.7 bits (98), Expect = 6e-12
Identities = 150/217 (69%), Gaps = 0/217 (0%)
Strand=Plus/Minus
Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402
|| ||| || || || ||| ||||| | ||||| ||||||||||| | | | ||
Sbjct 52922 GCTTGGACAACTCTCCTGGCAAGATCAATCTGACGGCAGTCTGGATCTCTCTGGCGGAGA 52863
Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462
| || |||||| || |||| | |||||||| |||| | || | |
Sbjct 52862 TGGTCGACTTCTTGTTGTAGGCAGCCAACTTGGAGGCCTCGGAAGCGATTCTCTCAAAGA 52803
Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522
||||||| || || |||||||| | |||||| | ||| | |||||| ||| ||| ||||
Sbjct 52802 TGTCGTTCACGAAAGAGTTCATTATCGACATGGCCTTCTGGGAGATACCCGTGTCCGGGT 52743
Query 1254523 GCACCTGCTTGAGCACCTTGTAGATGAACGACGAGTA 1254559
| |||||| | ||||||||||||| | || |||||
Sbjct 52742 GGGTCTGCTTCAACACCTTGTAGATGTAGGAGGAGTA 52706
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 6107096362235474
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |