Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pichia_20membranifaciens_20[genbank_20GCA_5F001950575.1_202016-12- 15] 522 sequences; 11,394,881 total letters Query= NC_021923.1 Length=140633 Score E Sequences producing significant alignments: (Bits) Value seq95 181 1e-40 seq97 134 1e-26 seq138 123 2e-23 seq468 98.7 9e-16 >seq95 Length=34527 Score = 181 bits (200), Expect = 1e-40 Identities = 1193/1886 (63%), Gaps = 64/1886 (3%) Strand=Plus/Minus Query 138153 TTTATCTACAGTAAACTTTATGGCATCAGCGGCTGGTTTCGTTCTCAGATAATACATTCC 138212 || ||| || ||||| | ||||| |||| || | || ||||| || || ||||| || Sbjct 2603 TTGATCAACTGTAAATTGGATGGCGGCAGCAGCGGCTTGGGTTCTGAGGTAGTACATACC 2544 Query 138213 CGTTTTTAACCCATTTTCCCAGGCGTACATGTGTATCGAAGTGAG-TAACGCGTAAGTCG 138271 || || ||||| || | ||| |||| | ||| ||||| || | | | | | || | Sbjct 2543 TGTCTTCAACCCCTTCTTCCAACCGTAGAAGTGCATCGAGGTCAACTTGCCCATG-GTTG 2485 Query 138272 GTTTCGCCAGAAATATGTTAAACGATTGACTCTGATCGATGAAAGCGCCTCGATCAATGG 138331 | ||| || ||||| | || ||| ||| |||||| | || |||| ||| | Sbjct 2484 GGTTCTTCAAGTGGATGTTCATGGACTGAGACTGGTCGATGTACGCACCTCTGTCAGCCG 2425 Query 138332 CCATGTTAATTAAATTTTTACTTTTCATCTCCCACACGGTCTTGTATAGATCACGAATAT 138391 |||||| || | || | |||||||| |||||||| || | || || | Sbjct 2424 CCATGTCGATGATCGCCTTCTGTGGGATCTCCCAGACGGTCTTATACAAGTCCTTGATTT 2365 Query 138392 GTCGCGGTATTGTTGCAATATTTTGAATGCTCCCGTTGGCCGCAATGATGCGATTTCTCA 138451 | || || ||| || || || ||| |||||| | | |||||| | || ||| Sbjct 2364 CCTGTGGGATGTTTGGAAGGTTCTGGATGGAACCGTTGTCGGAGATGATGTGGTTCTTCA 2305 Query 138452 TGTCATCGTTGTACAGATTCAACTTGATCAAGTCGTTTATCAGATATCTGTTTATGACCT 138511 | ||||| | || || || | |||||| | | || ||| ||| | | || Sbjct 2304 TAGAGTCGTTCCATAGTCCCATCTCCACCAAGTCTCTCAACATGTATGGGTTCACAATCT 2245 Query 138512 GAAATTCACCGGCCAATACTCGACGAACGTAAATGTTGTTGGTGAAAGGCTCAAACGATT 138571 | || ||||||||||| |||| | | ||| ||||| |||| | ||||| || ||| Sbjct 2244 GGAACTCACCGGCCAAAACTCTTCTAGAGTAGATGTTCGAGGTGTATGGCTCGAAACATT 2185 Query 138572 CGTTGTTTCCCAGAATCTGAGCCGTGGTCGCGGTCGGCATGTACGCCACCAAAAGAGAAT 138631 |||||| || |||||||| | |||| || || ||||| || ||||| | ||| | Sbjct 2184 CGTTGTAACCAAGAATCTGCGAGGTGGAAGCAGTTGGCATTGGGGCAACCAACAAAGAGT 2125 Query 138632 TCCGTAAACCGTGAAGCT-TGATTCGTTCCTTGAGCGACGACCAGTCCCACAAATCGCTA 138690 | | || ||||| ||| |||| ||||| || || ||||||||| || ||| || Sbjct 2124 TTCTCAACCCGTG-GGCTCTGATCTTCTCCTTCAGGGAATCCCAGTCCCATAAGTCGGTA 2066 Query 138691 GGTTTTTTGTTCCACATATCGTACTGTAACATTCCCAAACTTGCGGGACTGCCTTCGTAC 138750 || || || ||| | ||| |||| | || || ||| || ||| || || Sbjct 2065 GGCTTCTTACCCCAGAGGTCGAACTGGAGCACACCTTGCGATGCTGGTGAGCCCTCATAG 2006 Query 138751 GAATCGTATACACCAAACT-CTTG--CGCCAACTCGTTGCTCGCCTCGAGCGCACCATAG 138807 | ||||| ||| || |||| ||||||||| | ||| || || ||| ||| | Sbjct 2005 GTCTCGTAGGGACC---CTCCTTGATTGCCAACTCGACGGACGCTTCAAGTGCAGCATGG 1949 Query 138808 TAAATAGTTTCGGCAATCTGCTGATTGAGCAA-TC--GGGCCTCGGCGCTCTCGTACGGC 138864 || || |||||| ||| || || || ||| || ||||| | ||| | ||| Sbjct 1948 TAGATTGTTTCGAAAATTTG--GA-TGTTCAACTCCTTTGCCTCTGGAGAGTCGAAAGGC 1892 Query 138865 ATGCGGAGCATCGTGAACGCGTCGGCCAGCCCTTGCACGCCCACTCCGACAGGGCGATGG 138924 | | ||| | | |||| |||||||||| ||||| || || || | | || | | Sbjct 1891 AGTCTGAGGAGCATGAAAGCGTCGGCCAAACCTTGGACACCAACAGCAATCGGTCTGTTT 1832 Query 138925 CGCAGATTTGACGCTTTTGCGGCTTCG--ATAGGATAATAGTTTACATCGATGATTTTGT 138982 | || || || | | | || || | |||||| || || |||||||||||||||| Sbjct 1831 CTCATGTTAGA--TCTCCGTGCCTCCGGAACAGGATAGTAATTGACATCGATGATTTTGT 1774 Query 138983 TTAAAT--TTCGCACGACCACCTTAGTCGTATGCTTTAATCGTTCAAAATCGTATGTGCC 139040 | || | || ||| || ||||| | | | | ||| ||||| | ||| | Sbjct 1773 TCAAGTTCTTGGCA--ACAACCTTGGCGATCTCGTGCAATTTCTCAAAGTTGTACCAGGA 1716 Query 139041 CCCGTTGTCGTCGACGACGTCGACAAA-TTTGTTGACACAAATCGAGGCTATGTTGCACA 139099 || ||||| || |||||||| | || | || ||| || | ||| || | Sbjct 1715 AGTGTGATCGTC-AC--TCTCGACAAAGGCAGGCAACGC-AACCGAAGCCAAGTTACAGA 1660 Query 139100 CCGCCACTTCGTCGGGGTCGCTG--TATTCGACAATTTCGGCACACAAATTACTACACTT 139157 | || ||||| || | ||| | ||||||||||| || |||||| || | | || Sbjct 1659 CAGCGACTTCATC--GTTCGAAGAATATTCGACAATCTCACAACACAAGTTGGAAGATTT 1602 Query 139158 GATCGTACCTAAATTTTGTTGATTGCTTTTTCGGTTACAAGCATCTTTGTAAAGCATATA 139217 |||| |||| || || ||||| ||| |||| |||||| || || ||||| ||||| | Sbjct 1601 GATCATACCCAAGTTCTGTTGGTTGGATTTTGTGTTACATGCGTCCTTGTAGAGCATGAA 1542 Query 139218 CGGTGTGCCAGTTTCCACTTGTGTCTCTATAATGAATTTGAACAA-----GTCCCTAGCT 139272 || || || ||||| ||| | || | || | | |||| || ||| | | Sbjct 1541 AGGAGTACCCGTTTCAGTTTGGGCTTCCAAGATCGAGTACCACAACTTTTGTGCCTTGAT 1482 Query 139273 TGTATTTGACGCACGTAAAGTTCGTCGCGCTCGTACTTTTCGTAGAGTTCGTCGAA-TCG 139331 || ||| || | ||| || | ||||| ||| || || || ||||| ||| Sbjct 1481 GGTCTTT---CTACCT-CTGTT-TTCTCTTTCGTATTTTGTATATAGCTCTTCGAACTCG 1427 Query 139332 TTCACCGTAGGCGTCAGA-AAGATCGCGA---CACTTGTCAGGACACATGAGCGACCATA 139387 ||||||||| |||| || ||| | || |||||| ||| | | || | |||| Sbjct 1426 -TCACCGTAGACGTCGGACAAGCCTGGGACCTCACTTG--GGGAGAAA--AGAGTCCATT 1372 Query 139388 CGCCGTTCGCCTTGACGCGCCTCATGAACAGATCCGGAATCCACAAAGCGAACAGCAAAT 139447 | ||| || || | | ||||||||| || || |||||||| || | ||| | Sbjct 1371 CCTGATTCTGCTCAACTCTCTTCATGAACAAGTCAGGTATCCACAATGCAGGGAACAAGT 1312 Query 139448 CGCGCGCCTTCTTATCTTCCGAACCCATGTTACGTTTCATGTTAAGGAAATCAAAAACGT 139507 | | || | | |||||| ||| ||| | ||| || | ||| || || | | Sbjct 1311 CTCTGGCTCTGATTTCTTCCTTACCGTGGTTCTTTCTCACGTCGATGAAGTCGAAGATAT 1252 Query 139508 CAGCGTGCCATGGTTCCAGATAGATGGCCATTGCGCCTTTCCGTTTG---CCACCTTGAT 139564 | | ||||||||| || ||||||| || | || ||| | |||| |||||||| | Sbjct 1251 CGGAGTGCCATGGCTCAAGATAGAGCGCAAAGGCACCTGGTCTTTTGTTACCACCTTGGT 1192 Query 139565 CGACGTGTCGTACAGCATTATTGAATACGCGCAACATCGGCTCCAGACCGCTCGCTGTTC 139624 |||| | || | | || ||||| || |||| ||| || | |||| | | || | Sbjct 1191 CGACATATCTGGCCGTGTTGTTGAAAACACGCATCATTGGAATGATACCGTTGGAAGTAC 1132 Query 139625 CGTTGG----TGCTACGGATGGGACTGTTGCGAGCTCGGACGTCATGTACATTGATGCCG 139680 |||||| ||| | | | | | |||| |||| || || || | | | || Sbjct 1131 CGTTGGTACCTGCAATGTAGGAGCCTGT----GGCTCTGATGTTGTGGATGTGCAAACCA 1076 Query 139681 ATTCCGCCGCCAAATTTGGATATTAAAACGCAATCGCGTAATGTCTCGTATATACCTCTT 139740 || || || | ||||| || | | || | || || ||||| ||||| Sbjct 1075 ATACCACCTGCGGTCTTGGAGATCAGCGCACACTGTTTCAAAGTGTCGTAGATACCCTCA 1016 Query 139741 ATGCTGTCGTCCTGCATCGTGACCAGAAAGCATGACGAAAGTTGCGGTAGTTTCGTGCCG 139800 || || || ||||| | ||||| || || || || | || | | || || Sbjct 1015 ATCGAATCATCTTGCATTGCGACCAAGAAACAGGAGGACATCTGGTTTCTTGGGGTACCT 956 Query 139801 GCTGCAAACAGAGTAGGACTCGCGTGCGTGAACATTTGTTTCGACATCAATTCGTACGTT 139860 || |||| |||||| ||||| ||||| | || |||||||| | ||| || Sbjct 955 GCGTTGAACAAGGTAGGAGAAGCGTGAGTGAAGTATCTCTTAGACATCAAGTTGTAGGTC 896 Query 139861 TCGATGGCGCTCACAATATCCCTTCCGTGGATACCGACAGAGACTCGCATCAGCATATGT 139920 |||||||||||| |||| || ||||| |||||||||| ||||| ||| | || || Sbjct 895 TCGATGGCGCTCTCAATGTCGTCGCCGTGAATACCGACAGCGACTCTCATGATCAAGTGC 836 Query 139921 TGGATCCGTTCGGCCACCGCGCCCTCGAtttttttCAGATAACCGTTCTCTAGGGTCTTG 139980 ||| | ||| || | | ||| || | | | || || |||| ||||||||| Sbjct 835 TGGGGTCTTTCCGCAATCTTGCCATCCAATCTCAAAAGGTAGGATCTCTCGAGGGTCTTG 776 Query 139981 TAGCCAAAGTACCTATAGTTGAAATC 140006 |||| ||||| | |||||||| || Sbjct 775 AAGCCGAAGTAATTGTAGTTGAAGTC 750 >seq97 Length=66064 Score = 134 bits (148), Expect = 1e-26 Identities = 170/234 (73%), Gaps = 0/234 (0%) Strand=Plus/Plus Query 24700 TACGATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGC 24759 || |||||| || || | ||||| || |||||||| |||||||| || || || || | Sbjct 5242 TAAGATGCAAATTTTCGTCAAAACCCTTACCGGTAAGACTATTACCCTTGAGGTTGAGTC 5301 Query 24760 CACCGACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGA 24819 ||||||| | || | || || ||||| ||||||||||| ||||| || || || || Sbjct 5302 TTCCGACACTATTGACAATGTCAAGCAAAAAATCCAAGACAAGGAAGGTATTCCACCTGA 5361 Query 24820 TCAACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTA 24879 || ||| | |||||||| || || || || |||| ||| |||| | || || || Sbjct 5362 CCAGCAAAGATTGATCTTCGCTGGTAAGCAATTGGAAGATGGTAGAACTTTATCCGACTA 5421 Query 24880 TAACATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGGCGG 24933 ||||| ||||||||||| || | |||||||| || ||||| | || || || Sbjct 5422 CAACATCCAAAAGGAATCCACTTTGCACTTGGTCTTAAGATTGAGAGGTGGTGG 5475 >seq138 Length=17849 Score = 123 bits (136), Expect = 2e-23 Identities = 164/228 (72%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 24703 GATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCAC 24762 |||||| || ||| | || || |||| ||||| || ||||| | ||||| ||| | | Sbjct 9500 GATGCAAATTTTTGTCAAGACCTTAACTGGTAAGACCATTACCTTGGAAGTCGAATCTTC 9559 Query 24763 CGACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822 ||||| | || | || || |||||||||||||| || ||||| || || || || || Sbjct 9560 TGACACTATCGATAATGTCAAGCAAAAGATCCAAGATAAGGAAGGTATCCCACCTGACCA 9619 Query 24823 ACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAA 24882 ||| | | || |||||||| || || | || ||| |||| |||| || || || Sbjct 9620 GCAAAGACTTATTTTTGCCGGTAAGCAATTAGAAGATGGTAGAACTTTGTCCGACTACAA 9679 Query 24883 CATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGG 24930 ||| ||||| ||||| || |||||||||| ||| ||||| | || || Sbjct 9680 CATCCAAAAAGAATCAACCTTACACTTGGTCTTGAGATTGAGAGGTGG 9727 >seq468 Length=160 Score = 98.7 bits (108), Expect = 9e-16 Identities = 113/152 (74%), Gaps = 0/152 (0%) Strand=Plus/Plus Query 24779 GTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAACAACGTTTGATCTTT 24838 || || ||||||||||| ||||| ||||| || || || || || || | | || || Sbjct 7 GTCAAGCAAAAGATCCAGGACAAGGAAGGTATTCCACCAGACCAGCAGAGACTTATTTTC 66 Query 24839 GCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAACATTCAAAAGGAATCG 24898 || || ||||| || || || |||| | |||| || || ||||| |||||||||||| Sbjct 67 GCTGGTAAACAACTAGAAGACGGAAGAACCTTGTCTGACTACAACATCCAAAAGGAATCG 126 Query 24899 ACACTACACTTGGTGTTGCGATTGCGCGGAGG 24930 || | |||||||||||| ||||| | || || Sbjct 127 ACTTTGCACTTGGTGTTGAGATTGAGAGGTGG 158 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 449894664418160