Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pichia_20membranifaciens_20[genbank_20GCA_5F001950575.1_202016-12-
15] 522 sequences; 11,394,881 total letters
Query= NC_021923.1
Length=140633
Score E
Sequences producing significant alignments: (Bits) Value
seq95 181 1e-40
seq97 134 1e-26
seq138 123 2e-23
seq468 98.7 9e-16
>seq95
Length=34527
Score = 181 bits (200), Expect = 1e-40
Identities = 1193/1886 (63%), Gaps = 64/1886 (3%)
Strand=Plus/Minus
Query 138153 TTTATCTACAGTAAACTTTATGGCATCAGCGGCTGGTTTCGTTCTCAGATAATACATTCC 138212
|| ||| || ||||| | ||||| |||| || | || ||||| || || ||||| ||
Sbjct 2603 TTGATCAACTGTAAATTGGATGGCGGCAGCAGCGGCTTGGGTTCTGAGGTAGTACATACC 2544
Query 138213 CGTTTTTAACCCATTTTCCCAGGCGTACATGTGTATCGAAGTGAG-TAACGCGTAAGTCG 138271
|| || ||||| || | ||| |||| | ||| ||||| || | | | | | || |
Sbjct 2543 TGTCTTCAACCCCTTCTTCCAACCGTAGAAGTGCATCGAGGTCAACTTGCCCATG-GTTG 2485
Query 138272 GTTTCGCCAGAAATATGTTAAACGATTGACTCTGATCGATGAAAGCGCCTCGATCAATGG 138331
| ||| || ||||| | || ||| ||| |||||| | || |||| ||| |
Sbjct 2484 GGTTCTTCAAGTGGATGTTCATGGACTGAGACTGGTCGATGTACGCACCTCTGTCAGCCG 2425
Query 138332 CCATGTTAATTAAATTTTTACTTTTCATCTCCCACACGGTCTTGTATAGATCACGAATAT 138391
|||||| || | || | |||||||| |||||||| || | || || |
Sbjct 2424 CCATGTCGATGATCGCCTTCTGTGGGATCTCCCAGACGGTCTTATACAAGTCCTTGATTT 2365
Query 138392 GTCGCGGTATTGTTGCAATATTTTGAATGCTCCCGTTGGCCGCAATGATGCGATTTCTCA 138451
| || || ||| || || || ||| |||||| | | |||||| | || |||
Sbjct 2364 CCTGTGGGATGTTTGGAAGGTTCTGGATGGAACCGTTGTCGGAGATGATGTGGTTCTTCA 2305
Query 138452 TGTCATCGTTGTACAGATTCAACTTGATCAAGTCGTTTATCAGATATCTGTTTATGACCT 138511
| ||||| | || || || | |||||| | | || ||| ||| | | ||
Sbjct 2304 TAGAGTCGTTCCATAGTCCCATCTCCACCAAGTCTCTCAACATGTATGGGTTCACAATCT 2245
Query 138512 GAAATTCACCGGCCAATACTCGACGAACGTAAATGTTGTTGGTGAAAGGCTCAAACGATT 138571
| || ||||||||||| |||| | | ||| ||||| |||| | ||||| || |||
Sbjct 2244 GGAACTCACCGGCCAAAACTCTTCTAGAGTAGATGTTCGAGGTGTATGGCTCGAAACATT 2185
Query 138572 CGTTGTTTCCCAGAATCTGAGCCGTGGTCGCGGTCGGCATGTACGCCACCAAAAGAGAAT 138631
|||||| || |||||||| | |||| || || ||||| || ||||| | ||| |
Sbjct 2184 CGTTGTAACCAAGAATCTGCGAGGTGGAAGCAGTTGGCATTGGGGCAACCAACAAAGAGT 2125
Query 138632 TCCGTAAACCGTGAAGCT-TGATTCGTTCCTTGAGCGACGACCAGTCCCACAAATCGCTA 138690
| | || ||||| ||| |||| ||||| || || ||||||||| || ||| ||
Sbjct 2124 TTCTCAACCCGTG-GGCTCTGATCTTCTCCTTCAGGGAATCCCAGTCCCATAAGTCGGTA 2066
Query 138691 GGTTTTTTGTTCCACATATCGTACTGTAACATTCCCAAACTTGCGGGACTGCCTTCGTAC 138750
|| || || ||| | ||| |||| | || || ||| || ||| || ||
Sbjct 2065 GGCTTCTTACCCCAGAGGTCGAACTGGAGCACACCTTGCGATGCTGGTGAGCCCTCATAG 2006
Query 138751 GAATCGTATACACCAAACT-CTTG--CGCCAACTCGTTGCTCGCCTCGAGCGCACCATAG 138807
| ||||| ||| || |||| ||||||||| | ||| || || ||| ||| |
Sbjct 2005 GTCTCGTAGGGACC---CTCCTTGATTGCCAACTCGACGGACGCTTCAAGTGCAGCATGG 1949
Query 138808 TAAATAGTTTCGGCAATCTGCTGATTGAGCAA-TC--GGGCCTCGGCGCTCTCGTACGGC 138864
|| || |||||| ||| || || || ||| || ||||| | ||| | |||
Sbjct 1948 TAGATTGTTTCGAAAATTTG--GA-TGTTCAACTCCTTTGCCTCTGGAGAGTCGAAAGGC 1892
Query 138865 ATGCGGAGCATCGTGAACGCGTCGGCCAGCCCTTGCACGCCCACTCCGACAGGGCGATGG 138924
| | ||| | | |||| |||||||||| ||||| || || || | | || | |
Sbjct 1891 AGTCTGAGGAGCATGAAAGCGTCGGCCAAACCTTGGACACCAACAGCAATCGGTCTGTTT 1832
Query 138925 CGCAGATTTGACGCTTTTGCGGCTTCG--ATAGGATAATAGTTTACATCGATGATTTTGT 138982
| || || || | | | || || | |||||| || || ||||||||||||||||
Sbjct 1831 CTCATGTTAGA--TCTCCGTGCCTCCGGAACAGGATAGTAATTGACATCGATGATTTTGT 1774
Query 138983 TTAAAT--TTCGCACGACCACCTTAGTCGTATGCTTTAATCGTTCAAAATCGTATGTGCC 139040
| || | || ||| || ||||| | | | | ||| ||||| | ||| |
Sbjct 1773 TCAAGTTCTTGGCA--ACAACCTTGGCGATCTCGTGCAATTTCTCAAAGTTGTACCAGGA 1716
Query 139041 CCCGTTGTCGTCGACGACGTCGACAAA-TTTGTTGACACAAATCGAGGCTATGTTGCACA 139099
|| ||||| || |||||||| | || | || ||| || | ||| || |
Sbjct 1715 AGTGTGATCGTC-AC--TCTCGACAAAGGCAGGCAACGC-AACCGAAGCCAAGTTACAGA 1660
Query 139100 CCGCCACTTCGTCGGGGTCGCTG--TATTCGACAATTTCGGCACACAAATTACTACACTT 139157
| || ||||| || | ||| | ||||||||||| || |||||| || | | ||
Sbjct 1659 CAGCGACTTCATC--GTTCGAAGAATATTCGACAATCTCACAACACAAGTTGGAAGATTT 1602
Query 139158 GATCGTACCTAAATTTTGTTGATTGCTTTTTCGGTTACAAGCATCTTTGTAAAGCATATA 139217
|||| |||| || || ||||| ||| |||| |||||| || || ||||| ||||| |
Sbjct 1601 GATCATACCCAAGTTCTGTTGGTTGGATTTTGTGTTACATGCGTCCTTGTAGAGCATGAA 1542
Query 139218 CGGTGTGCCAGTTTCCACTTGTGTCTCTATAATGAATTTGAACAA-----GTCCCTAGCT 139272
|| || || ||||| ||| | || | || | | |||| || ||| | |
Sbjct 1541 AGGAGTACCCGTTTCAGTTTGGGCTTCCAAGATCGAGTACCACAACTTTTGTGCCTTGAT 1482
Query 139273 TGTATTTGACGCACGTAAAGTTCGTCGCGCTCGTACTTTTCGTAGAGTTCGTCGAA-TCG 139331
|| ||| || | ||| || | ||||| ||| || || || ||||| |||
Sbjct 1481 GGTCTTT---CTACCT-CTGTT-TTCTCTTTCGTATTTTGTATATAGCTCTTCGAACTCG 1427
Query 139332 TTCACCGTAGGCGTCAGA-AAGATCGCGA---CACTTGTCAGGACACATGAGCGACCATA 139387
||||||||| |||| || ||| | || |||||| ||| | | || | ||||
Sbjct 1426 -TCACCGTAGACGTCGGACAAGCCTGGGACCTCACTTG--GGGAGAAA--AGAGTCCATT 1372
Query 139388 CGCCGTTCGCCTTGACGCGCCTCATGAACAGATCCGGAATCCACAAAGCGAACAGCAAAT 139447
| ||| || || | | ||||||||| || || |||||||| || | ||| |
Sbjct 1371 CCTGATTCTGCTCAACTCTCTTCATGAACAAGTCAGGTATCCACAATGCAGGGAACAAGT 1312
Query 139448 CGCGCGCCTTCTTATCTTCCGAACCCATGTTACGTTTCATGTTAAGGAAATCAAAAACGT 139507
| | || | | |||||| ||| ||| | ||| || | ||| || || | |
Sbjct 1311 CTCTGGCTCTGATTTCTTCCTTACCGTGGTTCTTTCTCACGTCGATGAAGTCGAAGATAT 1252
Query 139508 CAGCGTGCCATGGTTCCAGATAGATGGCCATTGCGCCTTTCCGTTTG---CCACCTTGAT 139564
| | ||||||||| || ||||||| || | || ||| | |||| |||||||| |
Sbjct 1251 CGGAGTGCCATGGCTCAAGATAGAGCGCAAAGGCACCTGGTCTTTTGTTACCACCTTGGT 1192
Query 139565 CGACGTGTCGTACAGCATTATTGAATACGCGCAACATCGGCTCCAGACCGCTCGCTGTTC 139624
|||| | || | | || ||||| || |||| ||| || | |||| | | || |
Sbjct 1191 CGACATATCTGGCCGTGTTGTTGAAAACACGCATCATTGGAATGATACCGTTGGAAGTAC 1132
Query 139625 CGTTGG----TGCTACGGATGGGACTGTTGCGAGCTCGGACGTCATGTACATTGATGCCG 139680
|||||| ||| | | | | | |||| |||| || || || | | | ||
Sbjct 1131 CGTTGGTACCTGCAATGTAGGAGCCTGT----GGCTCTGATGTTGTGGATGTGCAAACCA 1076
Query 139681 ATTCCGCCGCCAAATTTGGATATTAAAACGCAATCGCGTAATGTCTCGTATATACCTCTT 139740
|| || || | ||||| || | | || | || || ||||| |||||
Sbjct 1075 ATACCACCTGCGGTCTTGGAGATCAGCGCACACTGTTTCAAAGTGTCGTAGATACCCTCA 1016
Query 139741 ATGCTGTCGTCCTGCATCGTGACCAGAAAGCATGACGAAAGTTGCGGTAGTTTCGTGCCG 139800
|| || || ||||| | ||||| || || || || | || | | || ||
Sbjct 1015 ATCGAATCATCTTGCATTGCGACCAAGAAACAGGAGGACATCTGGTTTCTTGGGGTACCT 956
Query 139801 GCTGCAAACAGAGTAGGACTCGCGTGCGTGAACATTTGTTTCGACATCAATTCGTACGTT 139860
|| |||| |||||| ||||| ||||| | || |||||||| | ||| ||
Sbjct 955 GCGTTGAACAAGGTAGGAGAAGCGTGAGTGAAGTATCTCTTAGACATCAAGTTGTAGGTC 896
Query 139861 TCGATGGCGCTCACAATATCCCTTCCGTGGATACCGACAGAGACTCGCATCAGCATATGT 139920
|||||||||||| |||| || ||||| |||||||||| ||||| ||| | || ||
Sbjct 895 TCGATGGCGCTCTCAATGTCGTCGCCGTGAATACCGACAGCGACTCTCATGATCAAGTGC 836
Query 139921 TGGATCCGTTCGGCCACCGCGCCCTCGAtttttttCAGATAACCGTTCTCTAGGGTCTTG 139980
||| | ||| || | | ||| || | | | || || |||| |||||||||
Sbjct 835 TGGGGTCTTTCCGCAATCTTGCCATCCAATCTCAAAAGGTAGGATCTCTCGAGGGTCTTG 776
Query 139981 TAGCCAAAGTACCTATAGTTGAAATC 140006
|||| ||||| | |||||||| ||
Sbjct 775 AAGCCGAAGTAATTGTAGTTGAAGTC 750
>seq97
Length=66064
Score = 134 bits (148), Expect = 1e-26
Identities = 170/234 (73%), Gaps = 0/234 (0%)
Strand=Plus/Plus
Query 24700 TACGATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGC 24759
|| |||||| || || | ||||| || |||||||| |||||||| || || || || |
Sbjct 5242 TAAGATGCAAATTTTCGTCAAAACCCTTACCGGTAAGACTATTACCCTTGAGGTTGAGTC 5301
Query 24760 CACCGACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGA 24819
||||||| | || | || || ||||| ||||||||||| ||||| || || || ||
Sbjct 5302 TTCCGACACTATTGACAATGTCAAGCAAAAAATCCAAGACAAGGAAGGTATTCCACCTGA 5361
Query 24820 TCAACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTA 24879
|| ||| | |||||||| || || || || |||| ||| |||| | || || ||
Sbjct 5362 CCAGCAAAGATTGATCTTCGCTGGTAAGCAATTGGAAGATGGTAGAACTTTATCCGACTA 5421
Query 24880 TAACATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGGCGG 24933
||||| ||||||||||| || | |||||||| || ||||| | || || ||
Sbjct 5422 CAACATCCAAAAGGAATCCACTTTGCACTTGGTCTTAAGATTGAGAGGTGGTGG 5475
>seq138
Length=17849
Score = 123 bits (136), Expect = 2e-23
Identities = 164/228 (72%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 24703 GATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCAC 24762
|||||| || ||| | || || |||| ||||| || ||||| | ||||| ||| | |
Sbjct 9500 GATGCAAATTTTTGTCAAGACCTTAACTGGTAAGACCATTACCTTGGAAGTCGAATCTTC 9559
Query 24763 CGACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822
||||| | || | || || |||||||||||||| || ||||| || || || || ||
Sbjct 9560 TGACACTATCGATAATGTCAAGCAAAAGATCCAAGATAAGGAAGGTATCCCACCTGACCA 9619
Query 24823 ACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAA 24882
||| | | || |||||||| || || | || ||| |||| |||| || || ||
Sbjct 9620 GCAAAGACTTATTTTTGCCGGTAAGCAATTAGAAGATGGTAGAACTTTGTCCGACTACAA 9679
Query 24883 CATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGG 24930
||| ||||| ||||| || |||||||||| ||| ||||| | || ||
Sbjct 9680 CATCCAAAAAGAATCAACCTTACACTTGGTCTTGAGATTGAGAGGTGG 9727
>seq468
Length=160
Score = 98.7 bits (108), Expect = 9e-16
Identities = 113/152 (74%), Gaps = 0/152 (0%)
Strand=Plus/Plus
Query 24779 GTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAACAACGTTTGATCTTT 24838
|| || ||||||||||| ||||| ||||| || || || || || || | | || ||
Sbjct 7 GTCAAGCAAAAGATCCAGGACAAGGAAGGTATTCCACCAGACCAGCAGAGACTTATTTTC 66
Query 24839 GCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAACATTCAAAAGGAATCG 24898
|| || ||||| || || || |||| | |||| || || ||||| ||||||||||||
Sbjct 67 GCTGGTAAACAACTAGAAGACGGAAGAACCTTGTCTGACTACAACATCCAAAAGGAATCG 126
Query 24899 ACACTACACTTGGTGTTGCGATTGCGCGGAGG 24930
|| | |||||||||||| ||||| | || ||
Sbjct 127 ACTTTGCACTTGGTGTTGAGATTGAGAGGTGG 158
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 449894664418160
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |