Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pichia_20membranifaciens_20[genbank_20GCA_5F001950575.1_202016-12-
15] 522 sequences; 11,394,881 total letters
Query= NC_022098.1
Length=2473870
Score E
Sequences producing significant alignments: (Bits) Value
seq183 165 1e-34
seq60 132 8e-25
seq95 104 4e-16
seq120 98.7 2e-14
>seq183
Length=27355
Score = 165 bits (182), Expect = 1e-34
Identities = 238/332 (72%), Gaps = 9/332 (3%)
Strand=Plus/Minus
Query 794341 CCTTCGTCGCGACTGATCAATTCGTTGCTAAAGCAGAGGCCGGGCATGAGGCCGCGCTTC 794400
|| ||||| |||| |||||| ||||| || | |||||||||||| || ||||||
Sbjct 26490 CCCTCGTCCCGACAGATCAACTCGTTCGAGAACGTCAAGCCGGGCATGAGCCCCCGCTTC 26431
Query 794401 TTGAGCCAAAAGATGGCACAGAAACT-GCCCGAGAAAAAGATGCCCTCGACGGCGGCAAA 794459
|| | ||| ||||| | || |||| ||||||||| || || ||||| |||||||||||
Sbjct 26430 TTCAACCAGAAGATCG-ACGCAAACGAGCCCGAGAAGAAAATCCCCTCCACGGCGGCAAA 26372
Query 794460 GCCGACGAGCCGCTCGGCAAAAGTGTCCAGGC--CCTCTTTGTTGATCCACTTCATCGCC 794517
| || | |||||| |||| | | || ||| | ||||||||| | | ||||
Sbjct 26371 CGCCACCAAGCGCTCGCCAAA-----CAACGCATCCTTGTCGTTGATCCATCTGAGCGCC 26317
Query 794518 CACTCTGCCTTTTTCCTCACCGAGGGCACCGTGTCGATGGCGCGAAAGAGGTGGTCCTTC 794577
||||| ||||| | | | | | || | | ||||| ||| ||||||| || |||
Sbjct 26316 CACTCGGCCTTCTCCTTGATGCACGGGATGTTATCGATCGCGTTGAAGAGGTACTCGTTC 26257
Query 794578 TCGACCGGGTCCTTGACGTAGGTGTCGATGAGGAGCGAGTAGGTCTCTGAGTGGATGTTT 794637
|| ||| ||||| ||||| |||||||| | | |||||| ||||| |||||||||||
Sbjct 26256 TCCTTCGGATCCTTCACGTACGTGTCGATCAACAACGAGTACGTCTCCGAGTGGATGTTC 26197
Query 794638 TCGATGGCGATCTGGAAGCCATAAAAGCAGTT 794669
|| || ||||||||| || || || || ||
Sbjct 26196 TCCATCATGATCTGGAAACCGTAGAAACACTT 26165
Score = 120 bits (132), Expect = 5e-21
Identities = 180/254 (71%), Gaps = 4/254 (2%)
Strand=Plus/Minus
Query 793891 TGACGCCCGCCTTGGCATACTCGCCCACGCGCCGCTCGAAAAAGTTGGTCTTGCCCTCGA 793950
||||||| ||||| ||| ||| || ||| |||||| |||||||| ||||| | |
Sbjct 26813 TGACGCCGGCCTTCTGATAGTCGGAGACCCGCTTCTCGAAGAAGTTGGTTTTGCCGGCAA 26754
Query 793951 GCGAGATCAACTCCATCCACGGGAACGGGTTGGC--CGTCAGGTAGTGCTTCTCGCACCC 794008
|||| || |||||| | ||| ||||||| ||| ||||||||| ||||| ||
Sbjct 26753 GCGAAATGTTCTCCATGAAATCGAATGGGTTGGTGACGTT--GTAGTGCTTGTCGCAGCC 26696
Query 794009 GAGCGACGCAAGCAGGCGGTCGGCGACGAATTCAATGTACTGGCACATGAGGGCGGCGTT 794068
||| | ||| || |||||||||||| || || | |||||||||||| | | | |||
Sbjct 26695 GAGGGCGACAAACAAGCGGTCGGCGACAAACTCGACGTACTGGCACATCAAGTCCTTGTT 26636
Query 794069 CATGCCGATGAGCGCCACGGGCAGCGACTCGCTGACAAACTCTTTCTCGATCTCGACGGC 794128
|||||| | | ||||||| | || ||| | |||||||| || |||||
Sbjct 26635 CATGCCCAACAAGTTGACGGGCAAGGCGTCAGTGAAGTAGCGCTTCTCGATATCAACGGC 26576
Query 794129 CTCGATGATGATCT 794142
|||| |||||||||
Sbjct 26575 CTCGGTGATGATCT 26562
Score = 102 bits (112), Expect = 1e-15
Identities = 95/121 (79%), Gaps = 0/121 (0%)
Strand=Plus/Minus
Query 796296 GAGGTCGACCTCCTCGGCGGTCCAAAAGGAGGCCTCGGCCTTTTTGTACATCTCCCATAT 796355
||| |||| |||||||||||||||||| |||||||| ||||| |||||||||| ||||||
Sbjct 26014 GAGATCGATCTCCTCGGCGGTCCAAAAAGAGGCCTCTGCCTTCTTGTACATCTGCCATAT 25955
Query 796356 CCGTTGGTAGCGGATGGGGAACAGAACAAAGCGATTGGGGTTCTCGCGTAGCAGCGGCTC 796415
| ||||| ||| ||||| || ||||| || | |||||| | |||||||||
Sbjct 25954 CTCGTGGTACTTGATCGGGAAAAGCACAAACCGTCTCTTGTTCTCAACCAACAGCGGCTC 25895
Query 796416 G 796416
|
Sbjct 25894 G 25894
>seq60
Length=60384
Score = 132 bits (146), Expect = 8e-25
Identities = 185/257 (72%), Gaps = 2/257 (1%)
Strand=Plus/Minus
Query 1485470 TGTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCA 1485529
|||||||||||||||| ||||||| || ||||| |||||| ||| || || || |||
Sbjct 52961 TGTACTTGGTGACGGCTCTGGTACCTTCGGAGACCGCGTGCTTGGACAACTCTCCTGGCA 52902
Query 1485530 TGATCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGTTAGTGC 1485589
||||| | ||||| ||||||||||| | || | ||| || |||||| ||
Sbjct 52901 AGATCAATCTGACGGCAGTCTGGATCTCTCTGGCGGAGATGGTCGACTTCTTGTT-GTAG 52843
Query 1485590 GC-GCCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTC 1485648
|| |||| | |||||||| |||| | || | |||||||| || || ||||||
Sbjct 52842 GCAGCCAACTTGGAGGCCTCGGAAGCGATTCTCTCAAAGATGTCGTTCACGAAAGAGTTC 52783
Query 1485649 ATGATCGACATCGATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCACCTTG 1485708
|| |||||||| | || | |||||| ||| ||| ||||| |||||| | |||||||
Sbjct 52782 ATTATCGACATGGCCTTCTGGGAGATACCCGTGTCCGGGTGGGTCTGCTTCAACACCTTG 52723
Query 1485709 TAAACAAAGGACGAGTA 1485725
|| | |||| |||||
Sbjct 52722 TAGATGTAGGAGGAGTA 52706
>seq95
Length=34527
Score = 104 bits (114), Expect = 4e-16
Identities = 138/189 (73%), Gaps = 2/189 (1%)
Strand=Plus/Minus
Query 2073541 TGGTCGACATAGCGCGCCGTGTCGTTAAAGACGCGGAGCATGGGCACAAGGCCGTTGGAC 2073600
||||||||||| | ||||||| ||| || || || | ||| || | | ||||||||
Sbjct 1195 TGGTCGACATATCTGGCCGTGTTGTTGAAAACACGCATCATTGGAATGATACCGTTGGAA 1136
Query 2073601 TCGCCGTTGGTGCCCGCCACGTAGGCGCCCGAGGCGCGCACCTTGTGCGCG-GCAAAGCC 2073659
|||||||| || || | ||||| ||| | ||| | | ||||| | ||||| ||
Sbjct 1135 GTACCGTTGGTACCTGCAATGTAGGAGCCTGTGGCTCTGATGTTGTGGATGTGCAAA-CC 1077
Query 2073660 GATGCCGCCGGCCGCCTTGGAGATGAGCGCGCACTTTTTCAGCGTCTCGTAGATGCCCTC 2073719
|| || || || | ||||||||| ||||| |||| ||||| || |||||||| |||||
Sbjct 1076 AATACCACCTGCGGTCTTGGAGATCAGCGCACACTGTTTCAAAGTGTCGTAGATACCCTC 1017
Query 2073720 GATCGAGTC 2073728
||||| ||
Sbjct 1016 AATCGAATC 1008
>seq120
Length=74726
Score = 98.7 bits (108), Expect = 2e-14
Identities = 256/385 (66%), Gaps = 13/385 (3%)
Strand=Plus/Plus
Query 2019003 GACGGCAACATGCCCAACCTCTTGCTG-GCGGGCCCGCCCGGCACGGGCAAGACCACGAG 2019061
||||| ||| ||||| |||| | || ||||| | |||||| | || ||||| ||| |
Sbjct 38187 GACGGAAACCTGCCCCACCTGATCTTGAGCGGGTC-GCCCGGAATCGGGAAGACGACG-G 38244
Query 2019062 CATCGCG-TGCCTGGCGCGCGTGCT-CTTGGGCGCGGCCGCCGAC--------GAGGCCG 2019111
| || || || ||| | | ||| |||||| || || ||| |||||||
Sbjct 38245 CGGTGCTCTGTCTTGCGAGAGAGCTTCTTGGGGACGACCCGAGACTGCTGAAGGAGGCCG 38304
Query 2019112 TGCTCGAACTCAATGCGTCAGACGAGCGCGGCGTGGACGTCGTGCGTAGAATCATCAAGC 2019171
|||| || | || ||||| ||||| || ||| | ||| | || || | || ||||||
Sbjct 38305 TGCTTGAGTTGAACGCGTCGGACGACCGAGGCATCGACATTGTACGGAACATGATCAAGA 38364
Query 2019172 ATCACGCTTCGAAAAGAATCGACCTGCCGCCCGGCCGCCACAAGGTGATCATCCTCGATG 2019231
| || ||| | || ||||| | ||| |||||| | |||| || || |
Sbjct 38365 CTTTTGCACAGAAGAAGGTCACGCTGCCATACAACCGGCACAAGATTGTCATTCTGGACG 38424
Query 2019232 AGGCCGACTGCCTTACGTCGGCGGCCCAGCAGGCCCTCCGATCGACCATGGAAAAGTACA 2019291
|||| |||| ||||| || || |||||||| || || ||| ||||| | |||
Sbjct 38425 AGGCGGACTCGATTACGGCGAGTGCGCAGCAGGCGCTGAGACGGACGATGGAGATCTACT 38484
Query 2019292 CCAACACGACGCGGTTTGCGCTGGCCTGCAACACGTCGTCGATGGTCATCGAAGCCCTCC 2019351
| |||| |||||||||| | | |||||| |||| | | ||||||| | | |
Sbjct 38485 CGAACAGTACGCGGTTTGTCTTCTCGTGCAACCAGTCGAACAAGATCATCGAGCCGTTGC 38544
Query 2019352 AGAGCCGTTGCGCCATCTTGCGCTT 2019376
|||| || ||| |||||||||| ||
Sbjct 38545 AGAGTCGGTGCTCCATCTTGCGGTT 38569
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 7916190872479158
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |