Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pichia_20membranifaciens_20[genbank_20GCA_5F001950575.1_202016-12- 15] 522 sequences; 11,394,881 total letters Query= NC_022098.1 Length=2473870 Score E Sequences producing significant alignments: (Bits) Value seq183 165 1e-34 seq60 132 8e-25 seq95 104 4e-16 seq120 98.7 2e-14 >seq183 Length=27355 Score = 165 bits (182), Expect = 1e-34 Identities = 238/332 (72%), Gaps = 9/332 (3%) Strand=Plus/Minus Query 794341 CCTTCGTCGCGACTGATCAATTCGTTGCTAAAGCAGAGGCCGGGCATGAGGCCGCGCTTC 794400 || ||||| |||| |||||| ||||| || | |||||||||||| || |||||| Sbjct 26490 CCCTCGTCCCGACAGATCAACTCGTTCGAGAACGTCAAGCCGGGCATGAGCCCCCGCTTC 26431 Query 794401 TTGAGCCAAAAGATGGCACAGAAACT-GCCCGAGAAAAAGATGCCCTCGACGGCGGCAAA 794459 || | ||| ||||| | || |||| ||||||||| || || ||||| ||||||||||| Sbjct 26430 TTCAACCAGAAGATCG-ACGCAAACGAGCCCGAGAAGAAAATCCCCTCCACGGCGGCAAA 26372 Query 794460 GCCGACGAGCCGCTCGGCAAAAGTGTCCAGGC--CCTCTTTGTTGATCCACTTCATCGCC 794517 | || | |||||| |||| | | || ||| | ||||||||| | | |||| Sbjct 26371 CGCCACCAAGCGCTCGCCAAA-----CAACGCATCCTTGTCGTTGATCCATCTGAGCGCC 26317 Query 794518 CACTCTGCCTTTTTCCTCACCGAGGGCACCGTGTCGATGGCGCGAAAGAGGTGGTCCTTC 794577 ||||| ||||| | | | | | || | | ||||| ||| ||||||| || ||| Sbjct 26316 CACTCGGCCTTCTCCTTGATGCACGGGATGTTATCGATCGCGTTGAAGAGGTACTCGTTC 26257 Query 794578 TCGACCGGGTCCTTGACGTAGGTGTCGATGAGGAGCGAGTAGGTCTCTGAGTGGATGTTT 794637 || ||| ||||| ||||| |||||||| | | |||||| ||||| ||||||||||| Sbjct 26256 TCCTTCGGATCCTTCACGTACGTGTCGATCAACAACGAGTACGTCTCCGAGTGGATGTTC 26197 Query 794638 TCGATGGCGATCTGGAAGCCATAAAAGCAGTT 794669 || || ||||||||| || || || || || Sbjct 26196 TCCATCATGATCTGGAAACCGTAGAAACACTT 26165 Score = 120 bits (132), Expect = 5e-21 Identities = 180/254 (71%), Gaps = 4/254 (2%) Strand=Plus/Minus Query 793891 TGACGCCCGCCTTGGCATACTCGCCCACGCGCCGCTCGAAAAAGTTGGTCTTGCCCTCGA 793950 ||||||| ||||| ||| ||| || ||| |||||| |||||||| ||||| | | Sbjct 26813 TGACGCCGGCCTTCTGATAGTCGGAGACCCGCTTCTCGAAGAAGTTGGTTTTGCCGGCAA 26754 Query 793951 GCGAGATCAACTCCATCCACGGGAACGGGTTGGC--CGTCAGGTAGTGCTTCTCGCACCC 794008 |||| || |||||| | ||| ||||||| ||| ||||||||| ||||| || Sbjct 26753 GCGAAATGTTCTCCATGAAATCGAATGGGTTGGTGACGTT--GTAGTGCTTGTCGCAGCC 26696 Query 794009 GAGCGACGCAAGCAGGCGGTCGGCGACGAATTCAATGTACTGGCACATGAGGGCGGCGTT 794068 ||| | ||| || |||||||||||| || || | |||||||||||| | | | ||| Sbjct 26695 GAGGGCGACAAACAAGCGGTCGGCGACAAACTCGACGTACTGGCACATCAAGTCCTTGTT 26636 Query 794069 CATGCCGATGAGCGCCACGGGCAGCGACTCGCTGACAAACTCTTTCTCGATCTCGACGGC 794128 |||||| | | ||||||| | || ||| | |||||||| || ||||| Sbjct 26635 CATGCCCAACAAGTTGACGGGCAAGGCGTCAGTGAAGTAGCGCTTCTCGATATCAACGGC 26576 Query 794129 CTCGATGATGATCT 794142 |||| ||||||||| Sbjct 26575 CTCGGTGATGATCT 26562 Score = 102 bits (112), Expect = 1e-15 Identities = 95/121 (79%), Gaps = 0/121 (0%) Strand=Plus/Minus Query 796296 GAGGTCGACCTCCTCGGCGGTCCAAAAGGAGGCCTCGGCCTTTTTGTACATCTCCCATAT 796355 ||| |||| |||||||||||||||||| |||||||| ||||| |||||||||| |||||| Sbjct 26014 GAGATCGATCTCCTCGGCGGTCCAAAAAGAGGCCTCTGCCTTCTTGTACATCTGCCATAT 25955 Query 796356 CCGTTGGTAGCGGATGGGGAACAGAACAAAGCGATTGGGGTTCTCGCGTAGCAGCGGCTC 796415 | ||||| ||| ||||| || ||||| || | |||||| | ||||||||| Sbjct 25954 CTCGTGGTACTTGATCGGGAAAAGCACAAACCGTCTCTTGTTCTCAACCAACAGCGGCTC 25895 Query 796416 G 796416 | Sbjct 25894 G 25894 >seq60 Length=60384 Score = 132 bits (146), Expect = 8e-25 Identities = 185/257 (72%), Gaps = 2/257 (1%) Strand=Plus/Minus Query 1485470 TGTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCA 1485529 |||||||||||||||| ||||||| || ||||| |||||| ||| || || || ||| Sbjct 52961 TGTACTTGGTGACGGCTCTGGTACCTTCGGAGACCGCGTGCTTGGACAACTCTCCTGGCA 52902 Query 1485530 TGATCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGTTAGTGC 1485589 ||||| | ||||| ||||||||||| | || | ||| || |||||| || Sbjct 52901 AGATCAATCTGACGGCAGTCTGGATCTCTCTGGCGGAGATGGTCGACTTCTTGTT-GTAG 52843 Query 1485590 GC-GCCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTC 1485648 || |||| | |||||||| |||| | || | |||||||| || || |||||| Sbjct 52842 GCAGCCAACTTGGAGGCCTCGGAAGCGATTCTCTCAAAGATGTCGTTCACGAAAGAGTTC 52783 Query 1485649 ATGATCGACATCGATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCACCTTG 1485708 || |||||||| | || | |||||| ||| ||| ||||| |||||| | ||||||| Sbjct 52782 ATTATCGACATGGCCTTCTGGGAGATACCCGTGTCCGGGTGGGTCTGCTTCAACACCTTG 52723 Query 1485709 TAAACAAAGGACGAGTA 1485725 || | |||| ||||| Sbjct 52722 TAGATGTAGGAGGAGTA 52706 >seq95 Length=34527 Score = 104 bits (114), Expect = 4e-16 Identities = 138/189 (73%), Gaps = 2/189 (1%) Strand=Plus/Minus Query 2073541 TGGTCGACATAGCGCGCCGTGTCGTTAAAGACGCGGAGCATGGGCACAAGGCCGTTGGAC 2073600 ||||||||||| | ||||||| ||| || || || | ||| || | | |||||||| Sbjct 1195 TGGTCGACATATCTGGCCGTGTTGTTGAAAACACGCATCATTGGAATGATACCGTTGGAA 1136 Query 2073601 TCGCCGTTGGTGCCCGCCACGTAGGCGCCCGAGGCGCGCACCTTGTGCGCG-GCAAAGCC 2073659 |||||||| || || | ||||| ||| | ||| | | ||||| | ||||| || Sbjct 1135 GTACCGTTGGTACCTGCAATGTAGGAGCCTGTGGCTCTGATGTTGTGGATGTGCAAA-CC 1077 Query 2073660 GATGCCGCCGGCCGCCTTGGAGATGAGCGCGCACTTTTTCAGCGTCTCGTAGATGCCCTC 2073719 || || || || | ||||||||| ||||| |||| ||||| || |||||||| ||||| Sbjct 1076 AATACCACCTGCGGTCTTGGAGATCAGCGCACACTGTTTCAAAGTGTCGTAGATACCCTC 1017 Query 2073720 GATCGAGTC 2073728 ||||| || Sbjct 1016 AATCGAATC 1008 >seq120 Length=74726 Score = 98.7 bits (108), Expect = 2e-14 Identities = 256/385 (66%), Gaps = 13/385 (3%) Strand=Plus/Plus Query 2019003 GACGGCAACATGCCCAACCTCTTGCTG-GCGGGCCCGCCCGGCACGGGCAAGACCACGAG 2019061 ||||| ||| ||||| |||| | || ||||| | |||||| | || ||||| ||| | Sbjct 38187 GACGGAAACCTGCCCCACCTGATCTTGAGCGGGTC-GCCCGGAATCGGGAAGACGACG-G 38244 Query 2019062 CATCGCG-TGCCTGGCGCGCGTGCT-CTTGGGCGCGGCCGCCGAC--------GAGGCCG 2019111 | || || || ||| | | ||| |||||| || || ||| ||||||| Sbjct 38245 CGGTGCTCTGTCTTGCGAGAGAGCTTCTTGGGGACGACCCGAGACTGCTGAAGGAGGCCG 38304 Query 2019112 TGCTCGAACTCAATGCGTCAGACGAGCGCGGCGTGGACGTCGTGCGTAGAATCATCAAGC 2019171 |||| || | || ||||| ||||| || ||| | ||| | || || | || |||||| Sbjct 38305 TGCTTGAGTTGAACGCGTCGGACGACCGAGGCATCGACATTGTACGGAACATGATCAAGA 38364 Query 2019172 ATCACGCTTCGAAAAGAATCGACCTGCCGCCCGGCCGCCACAAGGTGATCATCCTCGATG 2019231 | || ||| | || ||||| | ||| |||||| | |||| || || | Sbjct 38365 CTTTTGCACAGAAGAAGGTCACGCTGCCATACAACCGGCACAAGATTGTCATTCTGGACG 38424 Query 2019232 AGGCCGACTGCCTTACGTCGGCGGCCCAGCAGGCCCTCCGATCGACCATGGAAAAGTACA 2019291 |||| |||| ||||| || || |||||||| || || ||| ||||| | ||| Sbjct 38425 AGGCGGACTCGATTACGGCGAGTGCGCAGCAGGCGCTGAGACGGACGATGGAGATCTACT 38484 Query 2019292 CCAACACGACGCGGTTTGCGCTGGCCTGCAACACGTCGTCGATGGTCATCGAAGCCCTCC 2019351 | |||| |||||||||| | | |||||| |||| | | ||||||| | | | Sbjct 38485 CGAACAGTACGCGGTTTGTCTTCTCGTGCAACCAGTCGAACAAGATCATCGAGCCGTTGC 38544 Query 2019352 AGAGCCGTTGCGCCATCTTGCGCTT 2019376 |||| || ||| |||||||||| || Sbjct 38545 AGAGTCGGTGCTCCATCTTGCGGTT 38569 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7916190872479158