Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pichia_20membranifaciens_20[genbank_20GCA_5F001950575.1_202016-12- 15] 522 sequences; 11,394,881 total letters Query= NC_023177.1 Length=124688 Score E Sequences producing significant alignments: (Bits) Value seq138 131 1e-25 seq468 113 4e-20 seq97 102 7e-17 >seq138 Length=17849 Score = 131 bits (144), Expect = 1e-25 Identities = 167/230 (73%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 107553 AAAATGCAAATTTTTGTCAAAACTTTAACAGGCAAAACCATTACCGTCGAAACGGAGGCT 107612 || ||||||||||||||||| || ||||| || || ||||||||| | ||| || || Sbjct 9498 AAGATGCAAATTTTTGTCAAGACCTTAACTGGTAAGACCATTACCTTGGAAGTCGAATCT 9557 Query 107613 GGCGATACTGTCGGCCAGGTAAAACAAAAGATTGCCGATAAAGAAGGCGTGCCCGTGGAT 107672 || ||| ||| | || || |||||||| ||||| ||||| | || || Sbjct 9558 TCTGACACTATCGATAATGTCAAGCAAAAGATCCAAGATAAGGAAGGTATCCCACCTGAC 9617 Query 107673 CAGCAGAGACTTATTTATGCGGGTAAACAGCTGGAGGACGCCAAAACAATGGCGGACTAC 107732 ||||| |||||||||| ||| ||||| || | || || | | ||| || | |||||| Sbjct 9618 CAGCAAAGACTTATTTTTGCCGGTAAGCAATTAGAAGATGGTAGAACTTTGTCCGACTAC 9677 Query 107733 AACATTCAAAAGGAGTCTACGTTGCACATGGTGTTGAGATTGCGAGGGGG 107782 ||||| ||||| || || || || ||| |||| ||||||||| |||| || Sbjct 9678 AACATCCAAAAAGAATCAACCTTACACTTGGTCTTGAGATTGAGAGGTGG 9727 >seq468 Length=160 Score = 113 bits (124), Expect = 4e-20 Identities = 116/152 (76%), Gaps = 0/152 (0%) Strand=Plus/Plus Query 107631 GTAAAACAAAAGATTGCCGATAAAGAAGGCGTGCCCGTGGATCAGCAGAGACTTATTTAT 107690 || || |||||||| || || ||||| | || || |||||||||||||||| Sbjct 7 GTCAAGCAAAAGATCCAGGACAAGGAAGGTATTCCACCAGACCAGCAGAGACTTATTTTC 66 Query 107691 GCGGGTAAACAGCTGGAGGACGCCAAAACAATGGCGGACTACAACATTCAAAAGGAGTCT 107750 || |||||||| || || |||| | ||| || | ||||||||||| |||||||| || Sbjct 67 GCTGGTAAACAACTAGAAGACGGAAGAACCTTGTCTGACTACAACATCCAAAAGGAATCG 126 Query 107751 ACGTTGCACATGGTGTTGAGATTGCGAGGGGG 107782 || |||||| |||||||||||||| |||| || Sbjct 127 ACTTTGCACTTGGTGTTGAGATTGAGAGGTGG 158 >seq97 Length=66064 Score = 102 bits (112), Expect = 7e-17 Identities = 161/231 (70%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 107552 TAAAATGCAAATTTTTGTCAAAACTTTAACAGGCAAAACCATTACCGTCGAAACGGAGGC 107611 ||| ||||||||||| |||||||| | || || || || |||||| | || ||| | Sbjct 5242 TAAGATGCAAATTTTCGTCAAAACCCTTACCGGTAAGACTATTACCCTTGAGGTTGAGTC 5301 Query 107612 TGGCGATACTGTCGGCCAGGTAAAACAAAAGATTGCCGATAAAGAAGGCGTGCCCGTGGA 107671 | ||| ||| | | | | || || ||||| || || || ||||| | || || Sbjct 5302 TTCCGACACTATTGACAATGTCAAGCAAAAAATCCAAGACAAGGAAGGTATTCCACCTGA 5361 Query 107672 TCAGCAGAGACTTATTTATGCGGGTAAACAGCTGGAGGACGCCAAAACAATGGCGGACTA 107731 ||||| ||| | || | || ||||| || |||| || | | ||| | | ||||| Sbjct 5362 CCAGCAAAGATTGATCTTCGCTGGTAAGCAATTGGAAGATGGTAGAACTTTATCCGACTA 5421 Query 107732 CAACATTCAAAAGGAGTCTACGTTGCACATGGTGTTGAGATTGCGAGGGGG 107782 |||||| |||||||| || || |||||| |||| || |||||| |||| || Sbjct 5422 CAACATCCAAAAGGAATCCACTTTGCACTTGGTCTTAAGATTGAGAGGTGG 5472 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 398874262395658