Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pichia_20membranifaciens_20[genbank_20GCA_5F001950575.1_202016-12-
15] 522 sequences; 11,394,881 total letters
Query= NC_023681.1
Length=152710
Score E
Sequences producing significant alignments: (Bits) Value
seq183 122 9e-23
seq138 86.0 6e-12
>seq183
Length=27355
Score = 122 bits (134), Expect = 9e-23
Identities = 347/522 (66%), Gaps = 25/522 (5%)
Strand=Plus/Plus
Query 50197 TCAACGCTTTCGATAATATTCCGTGTGTGCGTAAAAAGGACGATTGGGCATTGAAATGGA 50256
||||||| ||||||| || ||||| | | |||| ||| ||||| | | |||||
Sbjct 26271 TCAACGCGATCGATAACATCCCGTGCATCAAGGAGAAGGCCGAGTGGGCGCTCAGATGGA 26330
Query 50257 CTaaaaacaaaaaa-CTTACTTTGGCCGAACGTTTAGTGGCGTTTGCCATAGTTGAAGGT 50315
|| |||| | | | |||||| || || || |||||||||||| || || ||
Sbjct 26331 TCAACGACAAGGATGCGTTGTTTGGC-GAGCGCTTGGTGGCGTTTGCCGCCGTGGAGGGG 26389
Query 50316 GTGtttttttCCGGTAGCTTTGCAGCCATATTTTACATTAA-AACCTTAGGCATAATGCC 50374
| || || || || ||||| | || || | | || || | ||| | |||||
Sbjct 26390 ATTTTCTTCTCGGGCTCGTTTGCGTCGATCTTCTGGTTGAAGAAGCGGGGGC-TCATGCC 26448
Query 50375 CGGCCTCACGTTTAGCAACGAGTTGATTTCGCGCGACGAAGGAATGCACACAGACTTTGC 50434
|||| | ||||| ||||||||||| | || ||||| || ||||||| ||||||||
Sbjct 26449 CGGCTTGACGTTCTCGAACGAGTTGATCTGTCGGGACGAGGGCTTGCACACCGACTTTGC 26508
Query 50435 GTGTTTGTACTACAATACGCGCGTAAATGAAAAATTATCATACGAAACAATTTTGGACAT 50494
|| |||| | | ||| | | ||| | | | |||| || ||| | ||
Sbjct 26509 CTGCTTGTTGTTCT---CGCACCTGAATAACACCC---CGGACGAGACGATTGTCCGCAA 26562
Query 50495 GTTCAAA---GAAGCCGTCGACATCGAAAAAGAGTTTTTCACGGACGCTTTACCCGTGGC 50551
| ||| || ||||| || ||||| || | ||||| ||||| || |||||
Sbjct 26563 GATCATCACCGAGGCCGTTGATATCGAGAAGCGCTACTTCACTGACGCCTTGCCCGTCAA 26622
Query 50552 ATTGTTGGGCATGAACGCAGACATGATGTGCGAGTACATTGAGTTTGTTGCAGACAGATT 50611
||||||||||||||| ||| |||||||| ||||| | |||||||| || ||| | ||
Sbjct 26623 CTTGTTGGGCATGAACAAGGACTTGATGTGCCAGTACGTCGAGTTTGTCGCCGACCGCTT 26682
Query 50612 G-TTGTTG----CAGCTGGGACAACCGAAATACTATAATG-CACGTAACCCCTTTCCGTT 50665
| |||| | | |||| ||||| | |||| || | ||| ||||| || ||
Sbjct 26683 GTTTGTCGCCCTCGGCTGCGACAAGC-----ACTACAACGTCAC-CAACCCATTCGATTT 26736
Query 50666 TATGAATAACATATCGTTGGAGGGCAAAACAAACTTTTTCGA 50707
||| | ||||| ||| | | |||||||| ||||| |||||
Sbjct 26737 CATGGAGAACATTTCGCTTGCCGGCAAAACCAACTTCTTCGA 26778
>seq138
Length=17849
Score = 86.0 bits (94), Expect = 6e-12
Identities = 155/227 (68%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 137185 CCTCCTCGTAAACGCAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCTC 137244
|| |||| || | ||| || || || | || ||||||||||| |||||||| ||| |
Sbjct 9727 CCACCTCTCAATCTCAAGACCAAGTGTAAGGTTGATTCTTTTTGGATGTTGTAGTCGGAC 9668
Query 137245 ATTGTGCTCGAGTCTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGT 137304
| || || ||||| | ||| ||||| ||| | || || | |||||| || || ||
Sbjct 9667 AAAGTTCTACCATCTTCTAATTGCTTACCGGCAAAAATAAGTCTTTGCTGGTCAGGTGGG 9608
Query 137305 ATGCCTTCTTTGTCGGTAATTTTTTGTTTTAGCTGTTCCACCGTGTCTGTGGGTTCTACT 137364
|| ||||| || || || ||||| || | | || | ||||| | | ||| |||
Sbjct 9607 ATACCTTCCTTATCTTGGATCTTTTGCTTGACATTATCGATAGTGTCAGAAGATTCGACT 9548
Query 137365 TCAACAGTCACCGTCTTGCCGGTCAATGTTTTTACGAATATTTGCAT 137411
|| | || | ||||| || || || || || || || ||||||||
Sbjct 9547 TCCAAGGTAATGGTCTTACCAGTTAAGGTCTTGACAAAAATTTGCAT 9501
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 488540812250400
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |