Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pichia_20membranifaciens_20[genbank_20GCA_5F001950575.1_202016-12-
15] 522 sequences; 11,394,881 total letters
Query= NC_024625.1
Length=151109
Score E
Sequences producing significant alignments: (Bits) Value
seq183 183 3e-41
seq97 87.8 2e-12
seq1 84.2 2e-11
>seq183
Length=27355
Score = 183 bits (202), Expect = 3e-41
Identities = 363/532 (68%), Gaps = 13/532 (2%)
Strand=Plus/Minus
Query 120355 TACTCGCCGACGCGTTTCTCAAAAAAGTTTGTTTTGCCCTCCATCGAAATGTTGTTCATA 120414
|| ||| ||| || ||||| || ||||| |||||||| | | ||||||||| | |||
Sbjct 26796 TAGTCGGAGACCCGCTTCTCGAAGAAGTTGGTTTTGCCGGCAAGCGAAATGTTCTCCATG 26737
Query 120415 AACTCGAACGGGTTGCTCGCGTTAAAGTATTTCGGCTGGCCCAACTGTACGAGCAGTCGG 120474
|| ||||| |||||| | |||| ||| || ||| | || | || |||
Sbjct 26736 AAATCGAATGGGTTGGTGACGTTGTAGTGCTTGTCGCAGCCGAGGGCGACAAACAAGCGG 26677
Query 120475 TCCGCTACAAACTCAATGTACTCGCACATGGACTGCGCGTTCATGCCCAGCAACGCCACC 120534
|| || |||||||| | ||||| |||||| | | | ||||||||||| ||| ||
Sbjct 26676 TCGGCGACAAACTCGACGTACTGGCACATCAAGTCCTTGTTCATGCCCAACAAGTTGACG 26617
Query 120535 GGCAACGCCGACGTGAAAAACTCCTTCTCAATGTCCACCGCCTCCTTGAACATG--GCGA 120592
||||| || ||||| | |||||| || || || ||||| ||| || |||
Sbjct 26616 GGCAAGGCGTCAGTGAAGTAGCGCTTCTCGATATCAACGGCCTCGGTGATGATCTTGCGG 26557
Query 120593 GCA-TAGTGTGG-CCGGGCATCTTGTGTTCGATGCGCGTTCG-GTAGTACAGGCACGCAA 120649
|| | || | | ||||| ||||| || | || || | | ||| ||| ||||
Sbjct 26556 ACAATCGTCTCGTCCGGG------GTGTT--ATTCAGGTGCGAGAACAACAAGCAGGCAA 26505
Query 120650 AGTCCGTGTGCAGGCCCTCGTCGCGCGATATCAGCTCGTTGCTAAACGTCAGGCCGGGCA 120709
|||| ||||||| ||||||||| || | |||| |||||| ||||||| ||||||||
Sbjct 26504 AGTCGGTGTGCAAGCCCTCGTCCCGACAGATCAACTCGTTCGAGAACGTCAAGCCGGGCA 26445
Query 120710 TGATGCCTTTCGTCTTGATGTAGAATATGGCGGCAAAGCTGCCCGAAAAGAACACGCCCT 120769
||| || | |||| | |||| || | ||||| |||||| ||||| | ||||
Sbjct 26444 TGAGCCCCCGCTTCTTCAACCAGAAGATCGACGCAAACGAGCCCGAGAAGAAAATCCCCT 26385
Query 120770 CCACGATGGCAAAGGCGACCATGCGCTCGGCCAACGTCGCCGTCTTGCTGTCGATCCACT 120829
||||| |||||| || |||| ||||||| | ||| ||| |||| || ||||||
Sbjct 26384 CCACGGCGGCAAACGCCACCAAGCGCTCGCCAAACAACGCATCCTTGTCGTTGATCCATC 26325
Query 120830 TCATGGCCCACTCGGCCTTTTTGCGCACGCACGGCATCCGCTCGAACGCGTT 120881
| | |||||||||||||| | | |||||| || |||| ||||||
Sbjct 26324 TGAGCGCCCACTCGGCCTTCTCCTTGATGCACGGGATGTTATCGATCGCGTT 26273
>seq97
Length=66064
Score = 87.8 bits (96), Expect = 2e-12
Identities = 107/146 (73%), Gaps = 0/146 (0%)
Strand=Plus/Minus
Query 133515 TGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATC 133574
||||| || ||| | || | | |||||||| || || || ||||||||||| |||
Sbjct 5391 TGCTTACCAGCGAAGATCAATCTTTGCTGGTCAGGTGGAATACCTTCCTTGTCTTGGATT 5332
Query 133575 TTTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCG 133634
|||||||||| | |||| ||||||| | ||| || || | ||| | || || |||
Sbjct 5331 TTTTGCTTGACATTGTCAATAGTGTCGGAAGACTCAACCTCAAGGGTAATAGTCTTACCG 5272
Query 133635 GTCAGAGTTTTTACGAAAATCTGCAT 133660
|| || ||||| |||||||| |||||
Sbjct 5271 GTAAGGGTTTTGACGAAAATTTGCAT 5246
>seq1
Length=426026
Score = 84.2 bits (92), Expect = 2e-11
Identities = 97/131 (74%), Gaps = 0/131 (0%)
Strand=Plus/Plus
Query 116476 GGCTTCCACGTGCACGAGTTTGGCGACACCAGCAACGGCTGCACCTCCGCCGGCGAACAC 116535
||||||||| | ||| |||| || || | || |||||| |||||||| || ||| ||||
Sbjct 378523 GGCTTCCACATCCACCAGTTCGGTGATAACACCAACGGATGCACCTCTGCTGGCCCACAC 378582
Query 116536 TTCAACCCCACCGGCCAGGACCACGGCGCGCCCAACGCCGCCGTTCGTCACGTCGGTGAC 116595
|||||||| |||| || ||||| ||||| | | || | ||||| ||||||
Sbjct 378583 TTCAACCCGTTCGGCAAGACGCACGGTGCGCCAGAGGACGAGACGAGACACGTTGGTGAC 378642
Query 116596 CTGGGCAACAT 116606
||||||||||
Sbjct 378643 TTGGGCAACAT 378653
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 483417645679280
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |