Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pichia_20membranifaciens_20[genbank_20GCA_5F001950575.1_202016-12- 15] 522 sequences; 11,394,881 total letters Query= NC_024625.1 Length=151109 Score E Sequences producing significant alignments: (Bits) Value seq183 183 3e-41 seq97 87.8 2e-12 seq1 84.2 2e-11 >seq183 Length=27355 Score = 183 bits (202), Expect = 3e-41 Identities = 363/532 (68%), Gaps = 13/532 (2%) Strand=Plus/Minus Query 120355 TACTCGCCGACGCGTTTCTCAAAAAAGTTTGTTTTGCCCTCCATCGAAATGTTGTTCATA 120414 || ||| ||| || ||||| || ||||| |||||||| | | ||||||||| | ||| Sbjct 26796 TAGTCGGAGACCCGCTTCTCGAAGAAGTTGGTTTTGCCGGCAAGCGAAATGTTCTCCATG 26737 Query 120415 AACTCGAACGGGTTGCTCGCGTTAAAGTATTTCGGCTGGCCCAACTGTACGAGCAGTCGG 120474 || ||||| |||||| | |||| ||| || ||| | || | || ||| Sbjct 26736 AAATCGAATGGGTTGGTGACGTTGTAGTGCTTGTCGCAGCCGAGGGCGACAAACAAGCGG 26677 Query 120475 TCCGCTACAAACTCAATGTACTCGCACATGGACTGCGCGTTCATGCCCAGCAACGCCACC 120534 || || |||||||| | ||||| |||||| | | | ||||||||||| ||| || Sbjct 26676 TCGGCGACAAACTCGACGTACTGGCACATCAAGTCCTTGTTCATGCCCAACAAGTTGACG 26617 Query 120535 GGCAACGCCGACGTGAAAAACTCCTTCTCAATGTCCACCGCCTCCTTGAACATG--GCGA 120592 ||||| || ||||| | |||||| || || || ||||| ||| || ||| Sbjct 26616 GGCAAGGCGTCAGTGAAGTAGCGCTTCTCGATATCAACGGCCTCGGTGATGATCTTGCGG 26557 Query 120593 GCA-TAGTGTGG-CCGGGCATCTTGTGTTCGATGCGCGTTCG-GTAGTACAGGCACGCAA 120649 || | || | | ||||| ||||| || | || || | | ||| ||| |||| Sbjct 26556 ACAATCGTCTCGTCCGGG------GTGTT--ATTCAGGTGCGAGAACAACAAGCAGGCAA 26505 Query 120650 AGTCCGTGTGCAGGCCCTCGTCGCGCGATATCAGCTCGTTGCTAAACGTCAGGCCGGGCA 120709 |||| ||||||| ||||||||| || | |||| |||||| ||||||| |||||||| Sbjct 26504 AGTCGGTGTGCAAGCCCTCGTCCCGACAGATCAACTCGTTCGAGAACGTCAAGCCGGGCA 26445 Query 120710 TGATGCCTTTCGTCTTGATGTAGAATATGGCGGCAAAGCTGCCCGAAAAGAACACGCCCT 120769 ||| || | |||| | |||| || | ||||| |||||| ||||| | |||| Sbjct 26444 TGAGCCCCCGCTTCTTCAACCAGAAGATCGACGCAAACGAGCCCGAGAAGAAAATCCCCT 26385 Query 120770 CCACGATGGCAAAGGCGACCATGCGCTCGGCCAACGTCGCCGTCTTGCTGTCGATCCACT 120829 ||||| |||||| || |||| ||||||| | ||| ||| |||| || |||||| Sbjct 26384 CCACGGCGGCAAACGCCACCAAGCGCTCGCCAAACAACGCATCCTTGTCGTTGATCCATC 26325 Query 120830 TCATGGCCCACTCGGCCTTTTTGCGCACGCACGGCATCCGCTCGAACGCGTT 120881 | | |||||||||||||| | | |||||| || |||| |||||| Sbjct 26324 TGAGCGCCCACTCGGCCTTCTCCTTGATGCACGGGATGTTATCGATCGCGTT 26273 >seq97 Length=66064 Score = 87.8 bits (96), Expect = 2e-12 Identities = 107/146 (73%), Gaps = 0/146 (0%) Strand=Plus/Minus Query 133515 TGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATC 133574 ||||| || ||| | || | | |||||||| || || || ||||||||||| ||| Sbjct 5391 TGCTTACCAGCGAAGATCAATCTTTGCTGGTCAGGTGGAATACCTTCCTTGTCTTGGATT 5332 Query 133575 TTTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCG 133634 |||||||||| | |||| ||||||| | ||| || || | ||| | || || ||| Sbjct 5331 TTTTGCTTGACATTGTCAATAGTGTCGGAAGACTCAACCTCAAGGGTAATAGTCTTACCG 5272 Query 133635 GTCAGAGTTTTTACGAAAATCTGCAT 133660 || || ||||| |||||||| ||||| Sbjct 5271 GTAAGGGTTTTGACGAAAATTTGCAT 5246 >seq1 Length=426026 Score = 84.2 bits (92), Expect = 2e-11 Identities = 97/131 (74%), Gaps = 0/131 (0%) Strand=Plus/Plus Query 116476 GGCTTCCACGTGCACGAGTTTGGCGACACCAGCAACGGCTGCACCTCCGCCGGCGAACAC 116535 ||||||||| | ||| |||| || || | || |||||| |||||||| || ||| |||| Sbjct 378523 GGCTTCCACATCCACCAGTTCGGTGATAACACCAACGGATGCACCTCTGCTGGCCCACAC 378582 Query 116536 TTCAACCCCACCGGCCAGGACCACGGCGCGCCCAACGCCGCCGTTCGTCACGTCGGTGAC 116595 |||||||| |||| || ||||| ||||| | | || | ||||| |||||| Sbjct 378583 TTCAACCCGTTCGGCAAGACGCACGGTGCGCCAGAGGACGAGACGAGACACGTTGGTGAC 378642 Query 116596 CTGGGCAACAT 116606 |||||||||| Sbjct 378643 TTGGGCAACAT 378653 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 483417645679280