Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pichia_20membranifaciens_20[genbank_20GCA_5F001950575.1_202016-12- 15] 522 sequences; 11,394,881 total letters Query= NC_024697.1 Length=370920 Score E Sequences producing significant alignments: (Bits) Value seq12 107 5e-18 seq95 104 6e-17 seq46 86.0 1e-11 >seq12 Length=164003 Score = 107 bits (118), Expect = 5e-18 Identities = 158/220 (72%), Gaps = 4/220 (2%) Strand=Plus/Minus Query 305309 CATTTGAATGACAATGATTGGGTTCTGTTCAATAGGCAACCATCACTGCATAAAATGTCT 305368 ||||| | || |||||| ||| | |||||| | || || || | ||||| |||||| Sbjct 53804 CATTTAATGGATAATGATCCAGTTTTATTCAATCGTCAGCCTTCTTTACATAAGATGTCT 53745 Query 305369 ATGATGGCTCATAAAGTCAAAGTATTAT-CTGGATTG-ACATTTCGATTAAATGTAAGTG 305426 |||||| ||||| || | ||| ||| | ||| ||||| ||| | ||| || || Sbjct 53744 ATGATGTGTCATAGGGTGAGAGT--TATGCCATATTCCACATTCCGAATGAATTTATCTG 53687 Query 305427 CTTGTACGCCTTATAATGCGGATTTTGATGGAGATGAAATGAATATGCATGTACCTCAAT 305486 ||||||| ||||| ||||| ||||| |||||||||||| ||||||| ||||| | Sbjct 53686 TCACATCGCCTTACAATGCAGATTTCGATGGTGATGAAATGAATTTGCATGTCCCTCAGT 53627 Query 305487 CAAAGGTTACAATGACTGAATTATCAGAAATATGTTCTGT 305526 || | | || | |||||||||| ||| | ||| |||| Sbjct 53626 CATACGAAACGAGAGCTGAATTATCTGAATTGTGTGCTGT 53587 >seq95 Length=34527 Score = 104 bits (114), Expect = 6e-17 Identities = 351/539 (65%), Gaps = 11/539 (2%) Strand=Plus/Plus Query 110468 TCATGCTACTCCTACCCTATTTAACGCAGGAACTAATGGAGGACAATTGGCTTCTTGCTT 110527 ||| ||| |||||||| | || |||||||| || || || || | || || || Sbjct 929 TCACGCTTCTCCTACCTTGTTCAACGCAGGTACCCCAAGAAACCAGATGTCCTCCTG-TT 987 Query 110528 TCTTC-TAGGAATTAACGATGATTCTATTGAAGGTATTTATGATGCTCTTAAAGAAACTG 110586 |||| | | ||| | |||||||| ||||| ||||| || || || | ||| | || Sbjct 988 TCTTGGTCGCAATGCAAGATGATTCGATTGAGGGTATCTACGACACTTTGAAACAGTGTG 1047 Query 110587 CTCTTATTTCTAAAAACTCTGGAGGAATTGGTATTCACGTTCATGATATTCGCTCAAAAG 110646 | || || || || | | | || || |||||| | ||| | || | || | | | || Sbjct 1048 CGCTGATCTCCAAGACCGCAGGTGGTATTGGTTTGCACATCCACAACATCAGAGCCACAG 1107 Query 110647 GAGCAAATATCGCAACAGCGAAGGGTGCTTCAACTGGACTTGTTCCAATGTTAAGAGTCT 110706 | | | || ||| | || ||| |||| | || | |||||||| | | || | Sbjct 1108 GCTCCTACATTGCAGGTACCAACGGTACTTCCAACGGTATCATTCCAATGATGCGTGTTT 1167 Query 110707 TCAACGACACTGCAAAATATGTGAATCAAGGTGGT---AAGAGAAATGGCTCATTTGCTA 110763 ||||| |||| || | |||||| | ||||||||| || ||| || | ||||| Sbjct 1168 TCAACAACACGGCCAGATATGTCGACCAAGGTGGTAACAAAAGACCAGGTGCCTTTGCGC 1227 Query 110764 TCTATCTCGAACCTTGGCATTCAGATATATTTGAATTCTTAGAACTTCGTAAAAATCAAG 110823 ||||||| || || ||||| || ||||| || || ||| | || | | || || || | Sbjct 1228 TCTATCTTGAGCCATGGCACTCCGATATCTTCGACTTCATCGACGTGAGAAAGAACCACG 1287 Query 110824 GATTTGAAGAACAAAGAGCACGTGATTTATTTTATGCAATGTGGATTTCAGATTTATTCA 110883 | |||||| ||||| | || || || |||| ||||||| | || || |||| Sbjct 1288 GTAAGGAAGAAATCAGAGCCAGAGACTTGTTCCCTGCATTGTGGATACCTGACTTGTTCA 1347 Query 110884 TGAAACGTGTTCA--AGAAAATGGCATGTGGTCTCTTATGTGTCCTCAT-CGTTCTCCTG 110940 |||| | ||| | |||| || | ||| ||||| | | || | | || || | Sbjct 1348 TGAAGAGAGTTGAGCAGAATCAGGAA--TGGACTCTTTTCTCCCCAAGTGAGGTC-CCAG 1404 Query 110941 GTCTATCTGATGTATATGGAAAAGAGTTTGAAGACCTTTACGAAAAATATGAAAAAGAA 110999 | | || || || || || | ||||| ||||| || || |||||| |||| |||| Sbjct 1405 GCTTGTCCGACGTCTACGGTGACGAGTTCGAAGAGCTATATACAAAATACGAAAGAGAA 1463 >seq46 Length=191907 Score = 86.0 bits (94), Expect = 1e-11 Identities = 149/214 (70%), Gaps = 2/214 (1%) Strand=Plus/Minus Query 305294 GATATTGTTATCAGACATTTGAATGACAATGATTGGGTTCTGTTCAATAGGCAACCATCA 305353 |||||||| |||||| | | || |||| ||| |||| || || || || || Sbjct 45613 GATATTGTGGAAAGACATATTGAGGATGGTGATATCGTTTTGTTTAACAGACAGCCTTCT 45554 Query 305354 CTGCATAAAATGTCTATGATGGCTCATAAAGTCAAAGTATTATC-TGGATTGACATTTCG 305412 || |||| | |||| || | ||||| | |||| | | | |||| || ||| | Sbjct 45553 CTACATAGATTGTCGATTTTATCTCATTTTGCCAAAATCAGACCATGGAGA-ACTTTTAG 45495 Query 305413 ATTAAATGTAAGTGCTTGTACGCCTTATAATGCGGATTTTGATGGAGATGAAATGAATAT 305472 ||| |||| | ||| ||||| ||||||||||| ||||| ||||| ||||| |||||| | Sbjct 45494 ATTGAATGAATGTGTCTGTACCCCTTATAATGCCGATTTCGATGGTGATGAGATGAATCT 45435 Query 305473 GCATGTACCTCAATCAAAGGTTACAATGACTGAA 305506 ||||| |||||| || | | ||| | ||||| Sbjct 45434 ACATGTGCCTCAAACAGAAGAGGCAAGGGCTGAA 45401 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1186804862447642