Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pichia_20membranifaciens_20[genbank_20GCA_5F001950575.1_202016-12-
15] 522 sequences; 11,394,881 total letters
Query= NC_024697.1
Length=370920
Score E
Sequences producing significant alignments: (Bits) Value
seq12 107 5e-18
seq95 104 6e-17
seq46 86.0 1e-11
>seq12
Length=164003
Score = 107 bits (118), Expect = 5e-18
Identities = 158/220 (72%), Gaps = 4/220 (2%)
Strand=Plus/Minus
Query 305309 CATTTGAATGACAATGATTGGGTTCTGTTCAATAGGCAACCATCACTGCATAAAATGTCT 305368
||||| | || |||||| ||| | |||||| | || || || | ||||| ||||||
Sbjct 53804 CATTTAATGGATAATGATCCAGTTTTATTCAATCGTCAGCCTTCTTTACATAAGATGTCT 53745
Query 305369 ATGATGGCTCATAAAGTCAAAGTATTAT-CTGGATTG-ACATTTCGATTAAATGTAAGTG 305426
|||||| ||||| || | ||| ||| | ||| ||||| ||| | ||| || ||
Sbjct 53744 ATGATGTGTCATAGGGTGAGAGT--TATGCCATATTCCACATTCCGAATGAATTTATCTG 53687
Query 305427 CTTGTACGCCTTATAATGCGGATTTTGATGGAGATGAAATGAATATGCATGTACCTCAAT 305486
||||||| ||||| ||||| ||||| |||||||||||| ||||||| ||||| |
Sbjct 53686 TCACATCGCCTTACAATGCAGATTTCGATGGTGATGAAATGAATTTGCATGTCCCTCAGT 53627
Query 305487 CAAAGGTTACAATGACTGAATTATCAGAAATATGTTCTGT 305526
|| | | || | |||||||||| ||| | ||| ||||
Sbjct 53626 CATACGAAACGAGAGCTGAATTATCTGAATTGTGTGCTGT 53587
>seq95
Length=34527
Score = 104 bits (114), Expect = 6e-17
Identities = 351/539 (65%), Gaps = 11/539 (2%)
Strand=Plus/Plus
Query 110468 TCATGCTACTCCTACCCTATTTAACGCAGGAACTAATGGAGGACAATTGGCTTCTTGCTT 110527
||| ||| |||||||| | || |||||||| || || || || | || || ||
Sbjct 929 TCACGCTTCTCCTACCTTGTTCAACGCAGGTACCCCAAGAAACCAGATGTCCTCCTG-TT 987
Query 110528 TCTTC-TAGGAATTAACGATGATTCTATTGAAGGTATTTATGATGCTCTTAAAGAAACTG 110586
|||| | | ||| | |||||||| ||||| ||||| || || || | ||| | ||
Sbjct 988 TCTTGGTCGCAATGCAAGATGATTCGATTGAGGGTATCTACGACACTTTGAAACAGTGTG 1047
Query 110587 CTCTTATTTCTAAAAACTCTGGAGGAATTGGTATTCACGTTCATGATATTCGCTCAAAAG 110646
| || || || || | | | || || |||||| | ||| | || | || | | | ||
Sbjct 1048 CGCTGATCTCCAAGACCGCAGGTGGTATTGGTTTGCACATCCACAACATCAGAGCCACAG 1107
Query 110647 GAGCAAATATCGCAACAGCGAAGGGTGCTTCAACTGGACTTGTTCCAATGTTAAGAGTCT 110706
| | | || ||| | || ||| |||| | || | |||||||| | | || |
Sbjct 1108 GCTCCTACATTGCAGGTACCAACGGTACTTCCAACGGTATCATTCCAATGATGCGTGTTT 1167
Query 110707 TCAACGACACTGCAAAATATGTGAATCAAGGTGGT---AAGAGAAATGGCTCATTTGCTA 110763
||||| |||| || | |||||| | ||||||||| || ||| || | |||||
Sbjct 1168 TCAACAACACGGCCAGATATGTCGACCAAGGTGGTAACAAAAGACCAGGTGCCTTTGCGC 1227
Query 110764 TCTATCTCGAACCTTGGCATTCAGATATATTTGAATTCTTAGAACTTCGTAAAAATCAAG 110823
||||||| || || ||||| || ||||| || || ||| | || | | || || || |
Sbjct 1228 TCTATCTTGAGCCATGGCACTCCGATATCTTCGACTTCATCGACGTGAGAAAGAACCACG 1287
Query 110824 GATTTGAAGAACAAAGAGCACGTGATTTATTTTATGCAATGTGGATTTCAGATTTATTCA 110883
| |||||| ||||| | || || || |||| ||||||| | || || ||||
Sbjct 1288 GTAAGGAAGAAATCAGAGCCAGAGACTTGTTCCCTGCATTGTGGATACCTGACTTGTTCA 1347
Query 110884 TGAAACGTGTTCA--AGAAAATGGCATGTGGTCTCTTATGTGTCCTCAT-CGTTCTCCTG 110940
|||| | ||| | |||| || | ||| ||||| | | || | | || || |
Sbjct 1348 TGAAGAGAGTTGAGCAGAATCAGGAA--TGGACTCTTTTCTCCCCAAGTGAGGTC-CCAG 1404
Query 110941 GTCTATCTGATGTATATGGAAAAGAGTTTGAAGACCTTTACGAAAAATATGAAAAAGAA 110999
| | || || || || || | ||||| ||||| || || |||||| |||| ||||
Sbjct 1405 GCTTGTCCGACGTCTACGGTGACGAGTTCGAAGAGCTATATACAAAATACGAAAGAGAA 1463
>seq46
Length=191907
Score = 86.0 bits (94), Expect = 1e-11
Identities = 149/214 (70%), Gaps = 2/214 (1%)
Strand=Plus/Minus
Query 305294 GATATTGTTATCAGACATTTGAATGACAATGATTGGGTTCTGTTCAATAGGCAACCATCA 305353
|||||||| |||||| | | || |||| ||| |||| || || || || ||
Sbjct 45613 GATATTGTGGAAAGACATATTGAGGATGGTGATATCGTTTTGTTTAACAGACAGCCTTCT 45554
Query 305354 CTGCATAAAATGTCTATGATGGCTCATAAAGTCAAAGTATTATC-TGGATTGACATTTCG 305412
|| |||| | |||| || | ||||| | |||| | | | |||| || ||| |
Sbjct 45553 CTACATAGATTGTCGATTTTATCTCATTTTGCCAAAATCAGACCATGGAGA-ACTTTTAG 45495
Query 305413 ATTAAATGTAAGTGCTTGTACGCCTTATAATGCGGATTTTGATGGAGATGAAATGAATAT 305472
||| |||| | ||| ||||| ||||||||||| ||||| ||||| ||||| |||||| |
Sbjct 45494 ATTGAATGAATGTGTCTGTACCCCTTATAATGCCGATTTCGATGGTGATGAGATGAATCT 45435
Query 305473 GCATGTACCTCAATCAAAGGTTACAATGACTGAA 305506
||||| |||||| || | | ||| | |||||
Sbjct 45434 ACATGTGCCTCAAACAGAAGAGGCAAGGGCTGAA 45401
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1186804862447642
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |