Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pichia_20membranifaciens_20[genbank_20GCA_5F001950575.1_202016-12- 15] 522 sequences; 11,394,881 total letters Query= NC_025412.1 Length=369360 Score E Sequences producing significant alignments: (Bits) Value seq138 138 3e-27 seq97 107 5e-18 seq468 87.8 4e-12 >seq138 Length=17849 Score = 138 bits (152), Expect = 3e-27 Identities = 156/208 (75%), Gaps = 1/208 (0%) Strand=Plus/Plus Query 206179 TTTTG-CAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGT 206237 ||||| ||| || | || || || || || || |||||||| ||| ||||||||| | Sbjct 9509 TTTTGTCAAGACCTTAACTGGTAAGACCATTACCTTGGAAGTCGAATCTTCTGACACTAT 9568 Query 206238 CGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACT 206297 ||| || ||||||||||| ||||| || ||||| || || ||| |||||||| Sbjct 9569 CGATAATGTCAAGCAAAAGATCCAAGATAAGGAAGGTATCCCACCTGACCAGCAAAGACT 9628 Query 206298 TATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAA 206357 ||| || ||||| ||||| || |||||||| || |||||| |||| |||||| |||| || Sbjct 9629 TATTTTTGCCGGTAAGCAATTAGAAGATGGTAGAACTTTGTCCGACTACAACATCCAAAA 9688 Query 206358 AGAGTCTACTCTTCACCTTGTTTTGAGA 206385 ||| || || | ||| | || |||||| Sbjct 9689 AGAATCAACCTTACACTTGGTCTTGAGA 9716 >seq97 Length=66064 Score = 107 bits (118), Expect = 5e-18 Identities = 145/202 (72%), Gaps = 0/202 (0%) Strand=Plus/Plus Query 206184 CAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATC 206243 |||||| || || || || || || || | || || || ||| ||||| | || Sbjct 5260 CAAAACCCTTACCGGTAAGACTATTACCCTTGAGGTTGAGTCTTCCGACACTATTGACAA 5319 Query 206244 AGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTT 206303 || |||||||| || ||||| || ||||| ||| || ||| |||||| | ||||| Sbjct 5320 TGTCAAGCAAAAAATCCAAGACAAGGAAGGTATTCCACCTGACCAGCAAAGATTGATCTT 5379 Query 206304 CGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTC 206363 ||| || ||||| ||||||||||| || ||||| |||| |||||| |||| || || || Sbjct 5380 CGCTGGTAAGCAATTGGAAGATGGTAGAACTTTATCCGACTACAACATCCAAAAGGAATC 5439 Query 206364 TACTCTTCACCTTGTTTTGAGA 206385 ||| | ||| | || || ||| Sbjct 5440 CACTTTGCACTTGGTCTTAAGA 5461 >seq468 Length=160 Score = 87.8 bits (96), Expect = 4e-12 Identities = 104/141 (74%), Gaps = 0/141 (0%) Strand=Plus/Plus Query 206245 GTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTC 206304 || ||||||||||| || || || ||||| ||| || ||| || |||||||| ||| Sbjct 7 GTCAAGCAAAAGATCCAGGACAAGGAAGGTATTCCACCAGACCAGCAGAGACTTATTTTC 66 Query 206305 GCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCT 206364 || || || || | ||||| ||||| || ||| | || |||||| |||| || || || Sbjct 67 GCTGGTAAACAACTAGAAGACGGAAGAACCTTGTCTGACTACAACATCCAAAAGGAATCG 126 Query 206365 ACTCTTCACCTTGTTTTGAGA 206385 ||| | ||| | || |||||| Sbjct 127 ACTTTGCACTTGGTGTTGAGA 147 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1181812895834762