Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pichia_20membranifaciens_20[genbank_20GCA_5F001950575.1_202016-12-
15] 522 sequences; 11,394,881 total letters
Query= NC_025412.1
Length=369360
Score E
Sequences producing significant alignments: (Bits) Value
seq138 138 3e-27
seq97 107 5e-18
seq468 87.8 4e-12
>seq138
Length=17849
Score = 138 bits (152), Expect = 3e-27
Identities = 156/208 (75%), Gaps = 1/208 (0%)
Strand=Plus/Plus
Query 206179 TTTTG-CAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGT 206237
||||| ||| || | || || || || || || |||||||| ||| ||||||||| |
Sbjct 9509 TTTTGTCAAGACCTTAACTGGTAAGACCATTACCTTGGAAGTCGAATCTTCTGACACTAT 9568
Query 206238 CGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACT 206297
||| || ||||||||||| ||||| || ||||| || || ||| ||||||||
Sbjct 9569 CGATAATGTCAAGCAAAAGATCCAAGATAAGGAAGGTATCCCACCTGACCAGCAAAGACT 9628
Query 206298 TATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAA 206357
||| || ||||| ||||| || |||||||| || |||||| |||| |||||| |||| ||
Sbjct 9629 TATTTTTGCCGGTAAGCAATTAGAAGATGGTAGAACTTTGTCCGACTACAACATCCAAAA 9688
Query 206358 AGAGTCTACTCTTCACCTTGTTTTGAGA 206385
||| || || | ||| | || ||||||
Sbjct 9689 AGAATCAACCTTACACTTGGTCTTGAGA 9716
>seq97
Length=66064
Score = 107 bits (118), Expect = 5e-18
Identities = 145/202 (72%), Gaps = 0/202 (0%)
Strand=Plus/Plus
Query 206184 CAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATC 206243
|||||| || || || || || || || | || || || ||| ||||| | ||
Sbjct 5260 CAAAACCCTTACCGGTAAGACTATTACCCTTGAGGTTGAGTCTTCCGACACTATTGACAA 5319
Query 206244 AGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTT 206303
|| |||||||| || ||||| || ||||| ||| || ||| |||||| | |||||
Sbjct 5320 TGTCAAGCAAAAAATCCAAGACAAGGAAGGTATTCCACCTGACCAGCAAAGATTGATCTT 5379
Query 206304 CGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTC 206363
||| || ||||| ||||||||||| || ||||| |||| |||||| |||| || || ||
Sbjct 5380 CGCTGGTAAGCAATTGGAAGATGGTAGAACTTTATCCGACTACAACATCCAAAAGGAATC 5439
Query 206364 TACTCTTCACCTTGTTTTGAGA 206385
||| | ||| | || || |||
Sbjct 5440 CACTTTGCACTTGGTCTTAAGA 5461
>seq468
Length=160
Score = 87.8 bits (96), Expect = 4e-12
Identities = 104/141 (74%), Gaps = 0/141 (0%)
Strand=Plus/Plus
Query 206245 GTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTC 206304
|| ||||||||||| || || || ||||| ||| || ||| || |||||||| |||
Sbjct 7 GTCAAGCAAAAGATCCAGGACAAGGAAGGTATTCCACCAGACCAGCAGAGACTTATTTTC 66
Query 206305 GCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCT 206364
|| || || || | ||||| ||||| || ||| | || |||||| |||| || || ||
Sbjct 67 GCTGGTAAACAACTAGAAGACGGAAGAACCTTGTCTGACTACAACATCCAAAAGGAATCG 126
Query 206365 ACTCTTCACCTTGTTTTGAGA 206385
||| | ||| | || ||||||
Sbjct 127 ACTTTGCACTTGGTGTTGAGA 147
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1181812895834762
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |