Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pichia_20membranifaciens_20[genbank_20GCA_5F001950575.1_202016-12- 15] 522 sequences; 11,394,881 total letters Query= NC_026268.1 Length=139132 Score E Sequences producing significant alignments: (Bits) Value seq138 138 1e-27 seq97 109 5e-19 seq468 84.2 2e-11 >seq138 Length=17849 Score = 138 bits (152), Expect = 1e-27 Identities = 169/231 (73%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 25171 CAACATGCAAGTGTTTGTAAAAACATTAACCGGAAAATCGATCACGATCGAAGTCGAAGC 25230 ||| |||||| | ||||| || || ||||| || || | || || | ||||||||| | Sbjct 9497 CAAGATGCAAATTTTTGTCAAGACCTTAACTGGTAAGACCATTACCTTGGAAGTCGAATC 9556 Query 25231 CAACGATACTATCGAGCAAGTAAAACAAAAAATTACCGATAAAGAGGGTATACCGCCCGA 25290 || |||||||| | || || ||||| || ||||| || ||||| || || || Sbjct 9557 TTCTGACACTATCGATAATGTCAAGCAAAAGATCCAAGATAAGGAAGGTATCCCACCTGA 9616 Query 25291 TCAGCAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAATGTCAGCGATTA 25350 ||||||||||| |||| | ||| || ||| | ||||||| ||||| | | ||| || Sbjct 9617 CCAGCAAAGACTTATTTTTGCCGGTAAGCAATTAGAAGATGGTAGAACTTTGTCCGACTA 9676 Query 25351 CAATATTCAAAAAGAATCCACCATTCATTTAGTGTTAAGATTGAGAGGAGG 25401 ||| || ||||||||||| ||| | || || || || ||||||||||| || Sbjct 9677 CAACATCCAAAAAGAATCAACCTTACACTTGGTCTTGAGATTGAGAGGTGG 9727 >seq97 Length=66064 Score = 109 bits (120), Expect = 5e-19 Identities = 162/230 (70%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 25172 AACATGCAAGTGTTTGTAAAAACATTAACCGGAAAATCGATCACGATCGAAGTCGAAGCC 25231 || |||||| | || || ||||| | ||||| || | || || | || || || | Sbjct 5243 AAGATGCAAATTTTCGTCAAAACCCTTACCGGTAAGACTATTACCCTTGAGGTTGAGTCT 5302 Query 25232 AACGATACTATCGAGCAAGTAAAACAAAAAATTACCGATAAAGAGGGTATACCGCCCGAT 25291 ||| ||||| || | || || |||||||| || || || ||||| || || || Sbjct 5303 TCCGACACTATTGACAATGTCAAGCAAAAAATCCAAGACAAGGAAGGTATTCCACCTGAC 5362 Query 25292 CAGCAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAATGTCAGCGATTAC 25351 ||||||||| | || | || || || ||| | ||||||| ||||| | | ||| ||| Sbjct 5363 CAGCAAAGATTGATCTTCGCTGGTAAGCAATTGGAAGATGGTAGAACTTTATCCGACTAC 5422 Query 25352 AATATTCAAAAAGAATCCACCATTCATTTAGTGTTAAGATTGAGAGGAGG 25401 || || ||||| |||||||| | || || || |||||||||||||| || Sbjct 5423 AACATCCAAAAGGAATCCACTTTGCACTTGGTCTTAAGATTGAGAGGTGG 5472 >seq468 Length=160 Score = 84.2 bits (92), Expect = 2e-11 Identities = 112/154 (73%), Gaps = 4/154 (3%) Strand=Plus/Plus Query 25250 GTAAAACAAAAAATTACCGATAAAGAGGGTATACCGCCCGATCAGCAAAGACTCATTTAC 25309 || || ||||| || || || || ||||| || || || ||||| ||||| |||| | Sbjct 7 GTCAAGCAAAAGATCCAGGACAAGGAAGGTATTCCACCAGACCAGCAGAGACTTATTTTC 66 Query 25310 GGCGGCAAACAACTCGAAGATGATAGAAA--TGTCAGCGATTACAATATTCAAAAAGAAT 25367 | || |||||||| ||||| | |||| |||| | | ||||| || ||||| |||| Sbjct 67 GCTGGTAAACAACTAGAAGACGGAAGAACCTTGTCTG--ACTACAACATCCAAAAGGAAT 124 Query 25368 CCACCATTCATTTAGTGTTAAGATTGAGAGGAGG 25401 | || | || || ||||| ||||||||||| || Sbjct 125 CGACTTTGCACTTGGTGTTGAGATTGAGAGGTGG 158 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 445091495759040