Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pichia_20membranifaciens_20[genbank_20GCA_5F001950575.1_202016-12- 15] 522 sequences; 11,394,881 total letters Query= NC_026421.1 Length=182380 Score E Sequences producing significant alignments: (Bits) Value seq175 168 8e-37 >seq175 Length=70746 Score = 168 bits (186), Expect = 8e-37 Identities = 455/695 (65%), Gaps = 21/695 (3%) Strand=Plus/Plus Query 146827 AAATCTTCTGCCCTGAAATCGTCTATGTCCTCCACCCGCCTCAAAATCTTGAGCTTGGGG 146886 |||||||| |||| ||||||||||| |||| || || | | ||||||| Sbjct 31924 AAATCTTCATATTTGAAGTCGTCTATGTCAGTCACCTTTCTTTTAACCACCAACTTGGGG 31983 Query 146887 AAGGGTCGGGGGTTCCTGGCCAGCTGAATTTTCAGGGGCTCCACGTGGTTGAGGTAGACG 146946 || || ||| || || ||| ||||| || || |||||||| || ||| Sbjct 31984 AATTTTCTGGGCACTCTCTGCAACTGCTCTTTCAAGGCGTCGACGTGGTTCGAATACACG 32043 Query 146947 TGCGCGTCCCCCAGGGTGTGCACAAAGTCCCCCGGCTTAAGGCCGGTCACGTGGGCCACC 147006 || ||||| |||| ||| ||||| || || |||| | | | || || | | Sbjct 32044 TGGGCGTCACCCATAACGTGTACAAACTCTCCGGGCTCCATGTCTACGACCATTGCGATC 32103 Query 147007 ATGTAGGTGAGCAGCGAGTAGCTGGCTATGTTGAAGGGGACCCCCAGGCCCATGTCCCCC 147066 ||||||||||||| | |||| ||| ||||||||||| || |||| ||||||||| | Sbjct 32104 ATGTAGGTGAGCAAGGCGTAGGAGGCGATGTTGAAGGGCACGCCCAAGCCCATGTCGCAG 32163 Query 147067 GACCTCTGGTACAGCTGGCACGAGAGC-------TCCCCG---TCGGC-----CACGTAA 147111 || |||||||||| |||||| |||| | |||| |||| |||||| Sbjct 32164 GATCTCTGGTACATCTGGCAGCTGAGCCGAGGCTTGCCCGATTTCGGGAAGCTCACGTAG 32223 Query 147112 AACTGGCACAGGATGTGGCACGGCGGCAGCGCCATGGCGGGCAGGTCCGCGGGGTTCCAG 147171 |||||||| | | |||||| || |||| ||||| | | ||| |||||||| Sbjct 32224 AACTGGCAGAACACGTGGCAGGGTGGCAAGGCCATCTCCTTGAACGCCGGCGGGTTCCAC 32283 Query 147172 GCCGAGACCACCAGCCGCCTGCTCTCGGGGTTCCTCTTAATCTCTTCGATAACCCACCTC 147231 || || | | | | ||| | || || |||| | | | || | || Sbjct 32284 GCGGACATGATGATTCTTCTGTCATATGGATTTGTCTTCAACGTGTGTATGATGGACGCG 32343 Query 147232 AGCTGGTCCACGCCCTGGCCCCCGTAGTTTGTCCCGCAGTCCACGTACCTGGCCCCAAAG 147291 |||||||| ||||||||| ||||| || |||| ||| |||| || |||||| Sbjct 32344 AGCTGGTCGTAGCCCTGGCCAGAGTAGTCTGCGTCGCAATCCTTGTACTCTGCTCCAAAG 32403 Query 147292 TGCCTCCACTGGAAGCCGTACACTGGCCCCAGGTCGCCGGGCTTTCTGTGCGAG---AAG 147348 || ||||||||||||||||| || || |||| |||||| || |||| | ||| ||| Sbjct 32404 TGTCTCCACTGGAAGCCGTAGACGGGACCCAAGTCGCC---CTCTCTGCGGGAGGTCAAG 32460 Query 147349 CCCGCCCGCTTGAGAAACTCGGGGGACCCGTGGGCGTCCCAGATGCCCACTCCCTTGGCG 147408 ||| | ||| |||| | || |||| | | |||||||| || || || ||| Sbjct 32461 CCCAGGGAGTCGAGGTACTCCCGTGAGCCGTTGCCTTCCCAGATTTTGACGCCTTTTGCG 32520 Query 147409 GAGAGCTCCTTAGAGTCCGTGGAGCCCCGGATGAACCAGAGCAGCTCCTCCAAAACCCCC 147468 || ||| ||| | ||| || ||||| | | ||||| || || || | | | ||| Sbjct 32521 GAAAGCAGCTTTGCGTCTGTCGAGCCGTGCACAAACCACAGGAGTTCGTGGAGGATGCCC 32580 Query 147469 CTCCAAAAGACCCTCTTGGTGGTCAGCAGGGGGAA 147503 || ||||| |||| ||||||| ||| ||||| Sbjct 32581 TTCATGAAGACTTTCTTTGTGGTCAACAGAGGGAA 32615 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 583484192740800