Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pichia_20membranifaciens_20[genbank_20GCA_5F001950575.1_202016-12- 15] 522 sequences; 11,394,881 total letters Query= NC_026430.1 Length=125767 Score E Sequences producing significant alignments: (Bits) Value seq138 132 4e-26 seq97 86.0 5e-12 >seq138 Length=17849 Score = 132 bits (146), Expect = 4e-26 Identities = 180/250 (72%), Gaps = 2/250 (1%) Strand=Plus/Plus Query 106237 TTGTCATTTATAAGAGTTTAAAAATGCAAATTTTTGTTAAAACATTGACTGGCAAGACCA 106296 || || ||||| | ||| || |||||||||||||| || || || ||||| ||||||| Sbjct 9480 TTTTCCTTTATTACAGTC--AAGATGCAAATTTTTGTCAAGACCTTAACTGGTAAGACCA 9537 Query 106297 TTACCGTGGAAACAGAACCCGGCGATTCTGTTGGCCAAGTGAAACAAAAAATTGCCGACA 106356 ||||| ||||| ||| | || || | | | || || ||||| || || | Sbjct 9538 TTACCTTGGAAGTCGAATCTTCTGACACTATCGATAATGTCAAGCAAAAGATCCAAGATA 9597 Query 106357 AAGAAGGCGTGCCCGTTGATCAACAAAGGCTTATTTATGCGGGCAAACAATTAGAAGATT 106416 | ||||| | || ||| || ||||| ||||||| ||| || || |||||||||||| Sbjct 9598 AGGAAGGTATCCCACCTGACCAGCAAAGACTTATTTTTGCCGGTAAGCAATTAGAAGATG 9657 Query 106417 CTAAAACTATGGGCGATTACAACATACAAAAAGAATCTACACTACATTTAGTATTGAGGT 106476 || |||| || ||| |||||||| ||||||||||| || |||| || || ||||| | Sbjct 9658 GTAGAACTTTGTCCGACTACAACATCCAAAAAGAATCAACCTTACACTTGGTCTTGAGAT 9717 Query 106477 TACGAGGAGG 106486 | |||| || Sbjct 9718 TGAGAGGTGG 9727 >seq97 Length=66064 Score = 86.0 bits (94), Expect = 5e-12 Identities = 157/230 (68%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 106257 AAAATGCAAATTTTTGTTAAAACATTGACTGGCAAGACCATTACCGTGGAAACAGAACCC 106316 || ||||||||||| || ||||| | || || ||||| |||||| | || || | Sbjct 5243 AAGATGCAAATTTTCGTCAAAACCCTTACCGGTAAGACTATTACCCTTGAGGTTGAGTCT 5302 Query 106317 GGCGATTCTGTTGGCCAAGTGAAACAAAAAATTGCCGACAAAGAAGGCGTGCCCGTTGAT 106376 ||| || ||| | | || || |||||||| ||||| ||||| | || ||| Sbjct 5303 TCCGACACTATTGACAATGTCAAGCAAAAAATCCAAGACAAGGAAGGTATTCCACCTGAC 5362 Query 106377 CAACAAAGGCTTATTTATGCGGGCAAACAATTAGAAGATTCTAAAACTATGGGCGATTAC 106436 || ||||| | || | || || || ||||| |||||| || |||| | ||| ||| Sbjct 5363 CAGCAAAGATTGATCTTCGCTGGTAAGCAATTGGAAGATGGTAGAACTTTATCCGACTAC 5422 Query 106437 AACATACAAAAAGAATCTACACTACATTTAGTATTGAGGTTACGAGGAGG 106486 ||||| ||||| ||||| || | || || || || || || |||| || Sbjct 5423 AACATCCAAAAGGAATCCACTTTGCACTTGGTCTTAAGATTGAGAGGTGG 5472 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 402327040429376