Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pichia_20membranifaciens_20[genbank_20GCA_5F001950575.1_202016-12-
15] 522 sequences; 11,394,881 total letters
Query= NC_026440.1
Length=2243109
Score E
Sequences producing significant alignments: (Bits) Value
seq183 233 3e-55
seq60 95.1 2e-13
seq120 93.3 6e-13
>seq183
Length=27355
Score = 233 bits (258), Expect = 3e-55
Identities = 419/602 (70%), Gaps = 15/602 (2%)
Strand=Plus/Plus
Query 1455715 CGAGCCGCTGCTGCGCGATAACCCGAACCGCTTTGTCCTGTTCCCCATCCGCTACCAGCG 1455774
|||||||||| || || ||| || || ||||| || ||||| ||| |||||
Sbjct 25894 CGAGCCGCTGTTGGTTGAGAACAAGAGACGGTTTGTGCTTTTCCCGATCAAGTACCACGA 25953
Query 1455775 GATATGGGAAATGTACCAAAAAGGCCGAGGCCTCCTTTTGGACCGCCGAGGAGGTCGACC 1455834
||||||| | |||||| || ||||| |||||||| |||||||||||||||||| |||| |
Sbjct 25954 GATATGGCAGATGTAC-AAGAAGGCAGAGGCCTCTTTTTGGACCGCCGAGGAGATCGATC 26012
Query 1455835 TCGGCGCCGACACGGTCCACTGG---GTGTCGCTGAGCGACGACGAGCGCCATTTCATCA 1455891
|| ||| | | ||||| | | | ||| |||| ||||| | | ||||||
Sbjct 26013 TCTCAAAGGACCTGCACGACTGGAACGAGAGGTTGAACGACAACGAGAGATACTTCATCT 26072
Query 1455892 AGCACGTCCTCGCCTTTTTTCGCCGCCAGCGATGGCATCGTGGCCGAGAACCTGGCCGGC 1455951
| || | || || ||| ||||| || || || ||| ||||||| ||| |
Sbjct 26073 CGAGAGTGTTGGCGTTCTTT-GCCGCTTCGGACGGGATTGTGAACGAGAACTTGGTGGAG 26131
Query 1455952 CGCTTTATGAAAGAGGTCCAATTGCCAGAGGCACGTTTGTTTTACGGGTTCCAGATCGCC 1456011
||| |||||| || |||| |||||| | || ||||| |||||||||
Sbjct 26132 AACTTCTCCGCAGAGGTGCAGGTGCCGGAGGCAAAGTGTTTCTACGGTTTCCAGATCATG 26191
Query 1456012 ATCGAAAACATCCACTCTGAAACCTACTCGCTCCTGATCGACACCTACGTCAAGGACCCG 1456071
|| || ||||||||||| || || |||||| | |||||||||| ||||| ||||| |||
Sbjct 26192 ATGGAGAACATCCACTCGGAGACGTACTCGTTGTTGATCGACACGTACGTGAAGGATCCG 26251
Query 1456072 GTCGAGAAGGACCACCTCTTTCGCGCCATCGACACGGTGCCGTCGGTGAGGAAAAAGGCC 1456131
||||| || ||||||| ||| ||||| | | |||| | | | | ||||||
Sbjct 26252 AAGGAGAACGAGTACCTCTTCAACGCGATCGATAACATCCCGTGCATCAAGGAGAAGGCC 26311
Query 1456132 GACTGGGCGATGAAGTGGATCAACAAGGAGG--GCCTCGACACTTTGCCGAGCGGCTCGT 1456189
|| |||||| | | ||||||||| | ||| || | | |||| |||||| | ||
Sbjct 26312 GAGTGGGCGCTCAGATGGATCAACGACAAGGATGCGTTG----TTTGGCGAGCGCTTGGT 26367
Query 1456190 CGGCTTTGCCG-CGTCGAGGGCATCTTTTTCTCGGGCAGTTTCTGCG-CCATCTTTTGGC 1456247
| ||||||| ||| ||||| || || ||||||||| || |||| | ||||| |||
Sbjct 26368 GGCGTTTGCCGCCGTGGAGGGGATTTTCTTCTCGGGCTCGTT-TGCGTCGATCTTCTGGT 26426
Query 1456248 TCAAGAAGCGCGGCCTCATGCCCGGTCTTCTGCTTTAGCAACGAATTTATCAGTCGCGAC 1456307
| |||||||| || ||||||||||| ||| || ||||| || ||| |||| |||
Sbjct 26427 TGAAGAAGCGGGGGCTCATGCCCGG-CTTGACGTTCTCGAACGAGTTGATCTGTCGGGAC 26485
Query 1456308 GA 1456309
||
Sbjct 26486 GA 26487
Score = 93.3 bits (102), Expect = 6e-13
Identities = 131/178 (74%), Gaps = 7/178 (4%)
Strand=Plus/Plus
Query 1456608 ATGTGCCAGTACATTGAATTTTGTCGCCGACCGCCTGCTCGCGGCGCTCGGCTGCGGAGA 1456667
|||||||||||| | || ||| |||||||||||| || | | || ||||||||| || |
Sbjct 26648 ATGTGCCAGTACGTCGAGTTT-GTCGCCGACCGCTTGTTTGTCGCCCTCGGCTGC-GACA 26705
Query 1456668 AGCACTACCGGACG--GCCAACCCGTTCCCATGGATGGAGTTGATCTCGCTCGAGGGCAA 1456725
|||||||| ||| ||||||| ||| | |||||| || ||||| | |||||
Sbjct 26706 AGCACTAC--AACGTCACCAACCCATTCGATTTCATGGAGAACATTTCGCTTGCCGGCAA 26763
Query 1456726 GACCAACTTTTTCGAGCGCCGCGT-GGCGAGTACGCCAAGGCCGGCGTCACCGCCAAG 1456782
|||||||| |||||| || || ||| || ||||||||||||| ||||||
Sbjct 26764 AACCAACTTCTTCGAGAAGCGGGTCTCCGACTATCAGAAGGCCGGCGTCATGGCCAAG 26821
>seq60
Length=60384
Score = 95.1 bits (104), Expect = 2e-13
Identities = 168/244 (69%), Gaps = 6/244 (2%)
Strand=Plus/Plus
Query 724899 TACTCGTCCTTTATCTACAAGGTGCTCAAGCAGGTGCACCCCCGAACCGTTGGGCCATCC 724958
||||| |||| |||||||||||| | |||||| ||||| || | | |||
Sbjct 52706 TACTCCTCCTACATCTACAAGGTGTTGAAGCAGACCCACCCGGACACGGGT-----ATC- 52759
Query 724959 TCCAACAAGTCCATGTCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGC 725018
||| | ||| |||||||||| |||||||| || || |||||||| | || | ||||
Sbjct 52760 TCCCAGAAGGCCATGTCGATAATGAACTCTTTCGTGAACGACATCTTTGAGAGAATCGCT 52819
Query 725019 ACCGAGGCCGGTCGCCTGGCGCGCTCCAACAAGCGCAACACGATCGGCACGCGCGAGATC 725078
|||||||| |||| || ||||||| || ||| | | | ||||||
Sbjct 52820 TCCGAGGCCTCCAAGTTGGCTGCCTACAACAAGAAGTCGACCATCTCCGCCAGAGAGATC 52879
Query 725079 CAGACCGCCGTGCGCCTGATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGGGC 725138
||||| ||||| | ||||| ||| || || || ||| |||||| |||||||| ||
Sbjct 52880 CAGACTGCCGTCAGATTGATCTTGCCAGGAGAGTTGTCCAAGCACGCGGTCTCCGAAGGT 52939
Query 725139 ACCA 725142
||||
Sbjct 52940 ACCA 52943
>seq120
Length=74726
Score = 93.3 bits (102), Expect = 6e-13
Identities = 255/385 (66%), Gaps = 13/385 (3%)
Strand=Plus/Minus
Query 332873 AAGCGCAGGATGGCACAACGGCTCTGCAGGGCCTCGATGACCATTGACGACGTGTTGCAG 332932
|| |||| ||||| || || ||||||| | |||||||| | | |||| ||||||
Sbjct 38569 AACCGCAAGATGGAGCACCGACTCTGCAACGGCTCGATGATCTTGTTCGACTGGTTGCAC 38510
Query 332933 GCCAGGGCAAACCGCGTCGTATTGGTATGCTTTTCCATGGTCGACCGGAGGGCCTGTTGG 332992
| | | |||||||||| | || | | | ||||| ||| | || ||||| ||
Sbjct 38509 GAGAAGACAAACCGCGTACTGTTCGAGTAGATCTCCATCGTCCGTCTCAGCGCCTGCTGC 38450
Query 332993 GCCGCCGGCGTGAGGCAGTCGGCCTCGTCGAGGATGATGATCTTGTGGCGCCCGTGCGGC 333052
|| || ||| | |||| |||||||| || |||| |||||||| || || |||
Sbjct 38449 GCACTCGCCGTAATCGAGTCCGCCTCGTCCAGAATGACAATCTTGTGCCGGTTGTATGGC 38390
Query 333053 AGATCAACCCTTTTCGAGGCGTGGTGTTTGATGATCTTGCGCACGACGTCCACGCCGCGC 333112
|| ||| | ||| || ||||| || || || || | ||| | ||| ||
Sbjct 38389 AGCGTGACCTTCTTCTGTGCAAAAGTCTTGATCATGTTCCGTACAATGTCGATGCCTCGG 38330
Query 333113 TCGTCCGACGCGTTGAGTTCGAGCACGGCCTC--------GTCGGCGGCCGCACCCAAG- 333163
|||||||||||||| | || ||||||||||| ||| || || ||||||
Sbjct 38329 TCGTCCGACGCGTTCAACTCAAGCACGGCCTCCTTCAGCAGTCTCGGGTCGTCCCCAAGA 38270
Query 333164 AGGACGCGCGCCAGGCA-CGCGATGCTCGTGGTCTTGCCCGTGCCGGGCGGACCCGC-CA 333221
|| | | ||| || || || || ||| ||||| || | |||||| ||||||| ||
Sbjct 38269 AGCTCTCTCGCAAGACAGAGCACCGC-CGTCGTCTTCCCGATTCCGGGC-GACCCGCTCA 38212
Query 333222 GCAAGAGGTTGGGCATGTTGCCGTC 333246
| |||| ||||| ||| |||||
Sbjct 38211 AGATCAGGTGGGGCAGGTTTCCGTC 38187
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 7177760852140564
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |