Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pichia_20membranifaciens_20[genbank_20GCA_5F001950575.1_202016-12- 15] 522 sequences; 11,394,881 total letters Query= NC_026440.1 Length=2243109 Score E Sequences producing significant alignments: (Bits) Value seq183 233 3e-55 seq60 95.1 2e-13 seq120 93.3 6e-13 >seq183 Length=27355 Score = 233 bits (258), Expect = 3e-55 Identities = 419/602 (70%), Gaps = 15/602 (2%) Strand=Plus/Plus Query 1455715 CGAGCCGCTGCTGCGCGATAACCCGAACCGCTTTGTCCTGTTCCCCATCCGCTACCAGCG 1455774 |||||||||| || || ||| || || ||||| || ||||| ||| ||||| Sbjct 25894 CGAGCCGCTGTTGGTTGAGAACAAGAGACGGTTTGTGCTTTTCCCGATCAAGTACCACGA 25953 Query 1455775 GATATGGGAAATGTACCAAAAAGGCCGAGGCCTCCTTTTGGACCGCCGAGGAGGTCGACC 1455834 ||||||| | |||||| || ||||| |||||||| |||||||||||||||||| |||| | Sbjct 25954 GATATGGCAGATGTAC-AAGAAGGCAGAGGCCTCTTTTTGGACCGCCGAGGAGATCGATC 26012 Query 1455835 TCGGCGCCGACACGGTCCACTGG---GTGTCGCTGAGCGACGACGAGCGCCATTTCATCA 1455891 || ||| | | ||||| | | | ||| |||| ||||| | | |||||| Sbjct 26013 TCTCAAAGGACCTGCACGACTGGAACGAGAGGTTGAACGACAACGAGAGATACTTCATCT 26072 Query 1455892 AGCACGTCCTCGCCTTTTTTCGCCGCCAGCGATGGCATCGTGGCCGAGAACCTGGCCGGC 1455951 | || | || || ||| ||||| || || || ||| ||||||| ||| | Sbjct 26073 CGAGAGTGTTGGCGTTCTTT-GCCGCTTCGGACGGGATTGTGAACGAGAACTTGGTGGAG 26131 Query 1455952 CGCTTTATGAAAGAGGTCCAATTGCCAGAGGCACGTTTGTTTTACGGGTTCCAGATCGCC 1456011 ||| |||||| || |||| |||||| | || ||||| ||||||||| Sbjct 26132 AACTTCTCCGCAGAGGTGCAGGTGCCGGAGGCAAAGTGTTTCTACGGTTTCCAGATCATG 26191 Query 1456012 ATCGAAAACATCCACTCTGAAACCTACTCGCTCCTGATCGACACCTACGTCAAGGACCCG 1456071 || || ||||||||||| || || |||||| | |||||||||| ||||| ||||| ||| Sbjct 26192 ATGGAGAACATCCACTCGGAGACGTACTCGTTGTTGATCGACACGTACGTGAAGGATCCG 26251 Query 1456072 GTCGAGAAGGACCACCTCTTTCGCGCCATCGACACGGTGCCGTCGGTGAGGAAAAAGGCC 1456131 ||||| || ||||||| ||| ||||| | | |||| | | | | |||||| Sbjct 26252 AAGGAGAACGAGTACCTCTTCAACGCGATCGATAACATCCCGTGCATCAAGGAGAAGGCC 26311 Query 1456132 GACTGGGCGATGAAGTGGATCAACAAGGAGG--GCCTCGACACTTTGCCGAGCGGCTCGT 1456189 || |||||| | | ||||||||| | ||| || | | |||| |||||| | || Sbjct 26312 GAGTGGGCGCTCAGATGGATCAACGACAAGGATGCGTTG----TTTGGCGAGCGCTTGGT 26367 Query 1456190 CGGCTTTGCCG-CGTCGAGGGCATCTTTTTCTCGGGCAGTTTCTGCG-CCATCTTTTGGC 1456247 | ||||||| ||| ||||| || || ||||||||| || |||| | ||||| ||| Sbjct 26368 GGCGTTTGCCGCCGTGGAGGGGATTTTCTTCTCGGGCTCGTT-TGCGTCGATCTTCTGGT 26426 Query 1456248 TCAAGAAGCGCGGCCTCATGCCCGGTCTTCTGCTTTAGCAACGAATTTATCAGTCGCGAC 1456307 | |||||||| || ||||||||||| ||| || ||||| || ||| |||| ||| Sbjct 26427 TGAAGAAGCGGGGGCTCATGCCCGG-CTTGACGTTCTCGAACGAGTTGATCTGTCGGGAC 26485 Query 1456308 GA 1456309 || Sbjct 26486 GA 26487 Score = 93.3 bits (102), Expect = 6e-13 Identities = 131/178 (74%), Gaps = 7/178 (4%) Strand=Plus/Plus Query 1456608 ATGTGCCAGTACATTGAATTTTGTCGCCGACCGCCTGCTCGCGGCGCTCGGCTGCGGAGA 1456667 |||||||||||| | || ||| |||||||||||| || | | || ||||||||| || | Sbjct 26648 ATGTGCCAGTACGTCGAGTTT-GTCGCCGACCGCTTGTTTGTCGCCCTCGGCTGC-GACA 26705 Query 1456668 AGCACTACCGGACG--GCCAACCCGTTCCCATGGATGGAGTTGATCTCGCTCGAGGGCAA 1456725 |||||||| ||| ||||||| ||| | |||||| || ||||| | ||||| Sbjct 26706 AGCACTAC--AACGTCACCAACCCATTCGATTTCATGGAGAACATTTCGCTTGCCGGCAA 26763 Query 1456726 GACCAACTTTTTCGAGCGCCGCGT-GGCGAGTACGCCAAGGCCGGCGTCACCGCCAAG 1456782 |||||||| |||||| || || ||| || ||||||||||||| |||||| Sbjct 26764 AACCAACTTCTTCGAGAAGCGGGTCTCCGACTATCAGAAGGCCGGCGTCATGGCCAAG 26821 >seq60 Length=60384 Score = 95.1 bits (104), Expect = 2e-13 Identities = 168/244 (69%), Gaps = 6/244 (2%) Strand=Plus/Plus Query 724899 TACTCGTCCTTTATCTACAAGGTGCTCAAGCAGGTGCACCCCCGAACCGTTGGGCCATCC 724958 ||||| |||| |||||||||||| | |||||| ||||| || | | ||| Sbjct 52706 TACTCCTCCTACATCTACAAGGTGTTGAAGCAGACCCACCCGGACACGGGT-----ATC- 52759 Query 724959 TCCAACAAGTCCATGTCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGC 725018 ||| | ||| |||||||||| |||||||| || || |||||||| | || | |||| Sbjct 52760 TCCCAGAAGGCCATGTCGATAATGAACTCTTTCGTGAACGACATCTTTGAGAGAATCGCT 52819 Query 725019 ACCGAGGCCGGTCGCCTGGCGCGCTCCAACAAGCGCAACACGATCGGCACGCGCGAGATC 725078 |||||||| |||| || ||||||| || ||| | | | |||||| Sbjct 52820 TCCGAGGCCTCCAAGTTGGCTGCCTACAACAAGAAGTCGACCATCTCCGCCAGAGAGATC 52879 Query 725079 CAGACCGCCGTGCGCCTGATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGGGC 725138 ||||| ||||| | ||||| ||| || || || ||| |||||| |||||||| || Sbjct 52880 CAGACTGCCGTCAGATTGATCTTGCCAGGAGAGTTGTCCAAGCACGCGGTCTCCGAAGGT 52939 Query 725139 ACCA 725142 |||| Sbjct 52940 ACCA 52943 >seq120 Length=74726 Score = 93.3 bits (102), Expect = 6e-13 Identities = 255/385 (66%), Gaps = 13/385 (3%) Strand=Plus/Minus Query 332873 AAGCGCAGGATGGCACAACGGCTCTGCAGGGCCTCGATGACCATTGACGACGTGTTGCAG 332932 || |||| ||||| || || ||||||| | |||||||| | | |||| |||||| Sbjct 38569 AACCGCAAGATGGAGCACCGACTCTGCAACGGCTCGATGATCTTGTTCGACTGGTTGCAC 38510 Query 332933 GCCAGGGCAAACCGCGTCGTATTGGTATGCTTTTCCATGGTCGACCGGAGGGCCTGTTGG 332992 | | | |||||||||| | || | | | ||||| ||| | || ||||| || Sbjct 38509 GAGAAGACAAACCGCGTACTGTTCGAGTAGATCTCCATCGTCCGTCTCAGCGCCTGCTGC 38450 Query 332993 GCCGCCGGCGTGAGGCAGTCGGCCTCGTCGAGGATGATGATCTTGTGGCGCCCGTGCGGC 333052 || || ||| | |||| |||||||| || |||| |||||||| || || ||| Sbjct 38449 GCACTCGCCGTAATCGAGTCCGCCTCGTCCAGAATGACAATCTTGTGCCGGTTGTATGGC 38390 Query 333053 AGATCAACCCTTTTCGAGGCGTGGTGTTTGATGATCTTGCGCACGACGTCCACGCCGCGC 333112 || ||| | ||| || ||||| || || || || | ||| | ||| || Sbjct 38389 AGCGTGACCTTCTTCTGTGCAAAAGTCTTGATCATGTTCCGTACAATGTCGATGCCTCGG 38330 Query 333113 TCGTCCGACGCGTTGAGTTCGAGCACGGCCTC--------GTCGGCGGCCGCACCCAAG- 333163 |||||||||||||| | || ||||||||||| ||| || || |||||| Sbjct 38329 TCGTCCGACGCGTTCAACTCAAGCACGGCCTCCTTCAGCAGTCTCGGGTCGTCCCCAAGA 38270 Query 333164 AGGACGCGCGCCAGGCA-CGCGATGCTCGTGGTCTTGCCCGTGCCGGGCGGACCCGC-CA 333221 || | | ||| || || || || ||| ||||| || | |||||| ||||||| || Sbjct 38269 AGCTCTCTCGCAAGACAGAGCACCGC-CGTCGTCTTCCCGATTCCGGGC-GACCCGCTCA 38212 Query 333222 GCAAGAGGTTGGGCATGTTGCCGTC 333246 | |||| ||||| ||| ||||| Sbjct 38211 AGATCAGGTGGGGCAGGTTTCCGTC 38187 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7177760852140564