Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pichia_20membranifaciens_20[genbank_20GCA_5F001950575.1_202016-12-
15] 522 sequences; 11,394,881 total letters
Query= NC_026922.1
Length=157977
Score E
Sequences producing significant alignments: (Bits) Value
seq97 131 2e-25
seq138 123 3e-23
seq468 84.2 2e-11
>seq97
Length=66064
Score = 131 bits (144), Expect = 2e-25
Identities = 167/230 (73%), Gaps = 0/230 (0%)
Strand=Plus/Minus
Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCA 134546
|| ||||| | || || || | ||| | |||||||||||||| ||||||||||||
Sbjct 5472 CCACCTCTCAATCTTAAGACCAAGTGCAAAGTGGATTCCTTTTGGATGTTGTAGTCGGAT 5413
Query 134547 ACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGT 134606
| || | || || | || || || || || ||||| | ||||| || || ||
Sbjct 5412 AAAGTTCTACCATCTTCCAATTGCTTACCAGCGAAGATCAATCTTTGCTGGTCAGGTGGA 5353
Query 134607 ATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACG 134666
|| ||||| || ||||| |||||||| ||||| ||| | |||||||| || || ||
Sbjct 5352 ATACCTTCCTTGTCTTGGATTTTTTGCTTGACATTGTCAATAGTGTCGGAAGACTCAACC 5293
Query 134667 TCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCATTTT 134716
|| || ||||| || |||||||| | ||||| |||||||||||||| ||
Sbjct 5292 TCAAGGGTAATAGTCTTACCGGTAAGGGTTTTGACGAAAATTTGCATCTT 5243
>seq138
Length=17849
Score = 123 bits (136), Expect = 3e-23
Identities = 168/232 (72%), Gaps = 2/232 (1%)
Strand=Plus/Minus
Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGC-C 134545
|| ||||| | || ||| || | ||||| || ||||| ||||| |||||||||||| |
Sbjct 9727 CCACCTCTCAATCTCAAGACCAAGTGTAAGGTTGATTCTTTTTGGATGTTGTAGTCGGAC 9668
Query 134546 AACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGG 134605
|| | | | | || || | || || || |||||||| | | ||||| || || ||
Sbjct 9667 AAAGTTCTACCA-TCTTCTAATTGCTTACCGGCAAAAATAAGTCTTTGCTGGTCAGGTGG 9609
Query 134606 TATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCAC 134665
|| ||||| || ||||| || ||||| ||||| || | ||||| || ||||| ||
Sbjct 9608 GATACCTTCCTTATCTTGGATCTTTTGCTTGACATTATCGATAGTGTCAGAAGATTCGAC 9549
Query 134666 GTCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCATTTTG 134717
|| | |||||||| ||||| ||||| || || || ||||||||||| |||
Sbjct 9548 TTCCAAGGTAATGGTCTTACCAGTTAAGGTCTTGACAAAAATTTGCATCTTG 9497
>seq468
Length=160
Score = 84.2 bits (92), Expect = 2e-11
Identities = 112/153 (73%), Gaps = 2/153 (1%)
Strand=Plus/Minus
Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTC-GCC 134545
|| ||||| | || |||||| | ||| | || ||||||||||| ||||||||||| | |
Sbjct 158 CCACCTCTCAATCTCAACACCAAGTGCAAAGTCGATTCCTTTTGGATGTTGTAGTCAGAC 99
Query 134546 AACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGG 134605
|| ||| ||| || || ||||| || || ||||| | | |||||| || || ||
Sbjct 98 AA-GGTTCTTCCGTCTTCTAGTTGTTTACCAGCGAAAATAAGTCTCTGCTGGTCTGGTGG 40
Query 134606 TATGCCTTCTTTTTCTTGAATTTTTTGTTTGAC 134638
|| ||||| || || || || ||||| |||||
Sbjct 39 AATACCTTCCTTGTCCTGGATCTTTTGCTTGAC 7
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 505395102275440
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |