Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pichia_20membranifaciens_20[genbank_20GCA_5F001950575.1_202016-12- 15] 522 sequences; 11,394,881 total letters Query= NC_028091.1 Length=196300 Score E Sequences producing significant alignments: (Bits) Value seq95 327 1e-84 seq30 82.4 1e-10 >seq95 Length=34527 Score = 327 bits (362), Expect = 1e-84 Identities = 1184/1821 (65%), Gaps = 55/1821 (3%) Strand=Plus/Minus Query 110362 TCGGAGATAGTACATCCCGGTCTTGAGTCCTTGTTTCCATGCGTACATATGCATAGAAGA 110421 || ||| |||||||| || ||||| | || | ||||| |||| | ||||| || | Sbjct 2561 TCTGAGGTAGTACATACCTGTCTTCAACCCCTTCTTCCAACCGTAGAAGTGCATCGAGGT 2502 Query 110422 GAGCTTGGACATCGTTGGACTTTCCATGAAGAGGTTCAT--ACTTTGACTTTGGTCAATG 110479 | |||| ||| ||||| | | || | || |||||| ||| |||| |||| ||| Sbjct 2501 CAACTTGCCCATGGTTGGGTTCTTCAAGTGGATGTTCATGGACTGAGACT--GGTCGATG 2444 Query 110480 AAGCGCCCCCGT-TGTGCCGCCATATCAATGACATCCTTCATCTTAATTTCCCAAACTGT 110538 | ||| || | | |||||||| || |||| ||||| || ||||| || || Sbjct 2443 TA-CGCACCTCTGTCAGCCGCCATGTCGATGATCGCCTTCTGTGGGATCTCCCAGACGGT 2385 Query 110539 GCGATAGAGATTCTTGATATCATCTGGGATATCTGAGATATTCTGGATGGAACCCCCCGC 110598 ||| | | |||||| || | |||||| | || | |||||||||||||| | Sbjct 2384 CTTATACAAGTCCTTGATTTCCTGTGGGATGTTTGGAAGGTTCTGGATGGAACCGTTGTC 2325 Query 110599 CTTCACCATGAGATCCTTCATATCCTTGGACCAGAGACCAATCTTCTTGAGGTCATTGAC 110658 | ||| | | ||||||| | | ||| || || |||| | | ||| | | Sbjct 2324 GGAGATGATGTGGTTCTTCATAGAGTCGTTCCATAGTCCCATCTCCACCAAGTCTCTCAA 2265 Query 110659 GAGGTGCTTGTTGACAATGACAAACTCACCTGCGAGGGTTCTTCTCAGGTAGATGTTTGT 110718 | || ||| ||||| |||||||| || | |||||| ||||||||| | Sbjct 2264 CATGTATGGGTTCACAATCTGGAACTCACCGGCCAAAACTCTTCTAGAGTAGATGTTCGA 2205 Query 110719 TGTGTATGGTTCAAAGCATTCATTATTACCCAAGATTTGTGCGGTGGAGGCTGTTGGCAT 110778 |||||||| || || ||||| || | ||| | || || | |||||| || |||||||| Sbjct 2204 GGTGTATGGCTCGAAACATTCGTTGTAACCAAGAATCTGCGAGGTGGAAGCAGTTGGCAT 2145 Query 110779 TGGTGCCATCAAAAGACTGTTACGAAGACCCTTCTCCT-TGATGCGTTCCTTGAGAACAT 110837 ||| || | ||| | | ||| | | |||| | || |||| ||||| || || Sbjct 2144 TGGGGCAACCAACAAAGAGTTTCTCA-ACCCGTGGGCTCTGATCTTCTCCTTCAGGGAAT 2086 Query 110838 CCCAGTCGTAGTTGA-GCTTGGTTTCACCTT--CCCACATGTCAAACTGAAGCACCCCTT 110894 ||||||| | | | | || ||| || |||| | ||| ||||| ||||| |||| Sbjct 2085 CCCAGTCCCATAAGTCGGTAGGCTTC---TTACCCCAGAGGTCGAACTGGAGCACACCTT 2029 Query 110895 GGGACGCGGGAGAACCCTCAAAGGTTTCATAGGAACCTTGGGCTTCA--GCCAATTCACA 110952 | || || || || |||||| |||| || |||| ||| | ||| | ||||| || Sbjct 2028 GCGATGCTGGTGAGCCCTCATAGGTCTCGTAGGGACCCTC--CTTGATTGCCAACTCGAC 1971 Query 110953 GCTCGCCTCCAGGGATGCGTGATACATGGTTTCAAAGATACGAGCATTCATCTCCTTGGC 111012 | ||| || || | || || || || ||||| || || | |||| |||||| || Sbjct 1970 GGACGCTTCAAGTGCAGCATGGTAGATTGTTTCGAAAATTTGGATGTTCAACTCCTTTGC 1911 Query 111013 TTCATCTGAATCAAATGCGTAG-CGGCACAAAATAAATACATCCGCGAGACCTTGAACAC 111071 || || || || | | || | | | || || | || || | |||||| |||| Sbjct 1910 CTCTGGAGAGTCGAAAG-GCAGTCTGAGGAGCATGAAAGCGTCGGCCAAACCTTGGACAC 1852 Query 111072 CCAAACCAATAGGTCTGTGTCGCATATTAGACTTTCGCGCAGTCTCAACGGGATAAAAAT 111131 | | | |||| ||||||| || ||| ||||| | || || | ||| ||||| ||| Sbjct 1851 CAACAGCAATCGGTCTGTTTCTCATGTTAGATCTCCGTGCCTCCGGAACAGGATAGTAAT 1792 Query 111132 TTCTGTCAATGACTCGGTTTAGATTTTTGGTAACAATCTTTGTGATTTCATGAAGTTTTT 111191 | || |||| | ||| | || |||| ||||| ||| | ||| || || | ||| | Sbjct 1791 TGACATCGATGATTTTGTTCAAGTTCTTGGCAACAACCTTGGCGATCTCGTGCAATTTCT 1732 Query 111192 CATAAT-----CAA-AAGTGCGA--GTCTCTTCATTGACATACTTTGGAAGGGCGATTGA 111243 || | | || ||||| || ||| || | |||| | || | || | || Sbjct 1731 CAAAGTTGTACCAGGAAGTGTGATCGTCACTC--TCGACAAAGGCAGGCAACGCAACCGA 1674 Query 111244 TGCCAAATTGCAAACAGCCGTCTCATCCTTATCTGTGTACTCTAAAATTTCTGTACATAA 111303 ||||| || || ||||| ||||| || | || || | ||| || ||| || Sbjct 1673 AGCCAAGTTACAGACAGCGACTTCATCGTTCGAAGAATATTCGACAATCTCACAACACAA 1614 Query 111304 GTTGGAACTCTTAATCGTCCCCAAATTCTTTTGGTTACTCTTCTTGTTGCACGCATCCTT 111363 ||||||| || ||| | ||||| |||| |||||| || |||| || || ||||| Sbjct 1613 GTTGGAAGATTTGATCATACCCAAGTTCTGTTGGTTGGATTTTGTGTTACATGCGTCCTT 1554 Query 111364 GTAGAGCATGTAGGGCGTCCCCGTCTCCGTCTGTGATTTGAGAATAGCCTTCCA-AACAT 111422 |||||||||| | || || ||||| || || || | || | || | | ||| ||| | Sbjct 1553 GTAGAGCATGAAAGGAGTACCCGTTTCAGTTTGGGCTTCCAAGATCGAGTACCACAACTT 1494 Query 111423 CGGCGGCTGGTACAATGGCGTTGGCCCGTCCCTCCGCC---TCGTACTTTGTGTAGAGGG 111479 | | || | |||| || | || | | ||||| ||||| || || Sbjct 1493 TTGTGCCTTG----ATGGTCTTTCTACCTCTGTTTTCTCTTTCGTATTTTGTATATAGCT 1438 Query 111480 CTTCAAACTCCTCACCCACCGCGTCGGAGAGACCTGGTGCCTTGTCTGGACAGAAAAGAG 111539 |||| ||||| ||||| ||||||| | ||||| ||| ||| ||||||||| Sbjct 1437 CTTCGAACTCGTCACCGTAGACGTCGGACAAGCCTGGGACCTCACTTGGGGAGAAAAGAG 1378 Query 111540 ACCATTGACCACCTTC--CTCAACCCGCTTCATGAAAAGGTCTGGAATCCACAGGGATGA 111597 ||||| || ||| |||||| | ||||||||| | ||| || ||||||| | | Sbjct 1377 TCCATT--CCTGATTCTGCTCAACTCTCTTCATGAACAAGTCAGGTATCCACAATGCAGG 1320 Query 111598 AAAGAGATCTCTA-CACCGAGCCTCTTCGTCACCTTGGTTGAGTCGTAACTCAAGGAACT 111656 || | ||||| | | || ||||| | ||| ||||| || | || | ||| | Sbjct 1319 GAACAAGTCTCTGGCTCTGATT-TCTTCCTTACCGTGGTTCTTTCTCACGTCGATGAAGT 1261 Query 111657 CCATGATATCCGCGTGCCATGGCTCAAGATAGACTGCGATAGATCC----CTTTCGACGC 111712 | | |||||| | |||||||||||||||||||| || | | || |||| | Sbjct 1260 CGAAGATATCGGAGTGCCATGGCTCAAGATAGAGCGCAAAGGCACCTGGTCTTTTG-TTA 1202 Query 111713 CCAGCTTGATTTACATAGCGCGCTGTGGCGTTAAATACGCGAAGCATTGGAATAATACCA 111772 ||| |||| | ||||| | || ||| ||| || || || | ||||||||| ||||| Sbjct 1201 CCACCTTGGTCGACATATCTGGCCGTGTTGTTGAAAACACGCATCATTGGAATGATACCG 1142 Query 111773 TCTGATTGACCATTTGTCCCCCGAA--TACGAGATTTATTGGCTCTCACATCATGGATGT 111830 | || ||| || || || || || ||| | ||||||| | | ||||||| Sbjct 1141 TTGGAAGTACCGTTGGTACCTGCAATGTAGGAGCCT--GTGGCTCTGATGTTGTGGATGT 1084 Query 111831 GCATCCCAATACCCCCAGCCCACTTTGAGATTTGCGCACACTCCGTAAGAGTTCCATAGA 111890 ||| |||||||| || || ||| ||||| ||||||||| | | ||| | |||| Sbjct 1083 GCAAACCAATACCACCTGCGGTCTTGGAGATCAGCGCACACTGTTTCAAAGTGTCGTAGA 1024 Query 111891 TACCGTTGATTGAGTCCTCCTTGTTGGCGATAAGGAAGCAACTGGACATCTGCGGTCTTG 111950 |||| | || || || || | | |||| | ||| || ||||||||| ||||| Sbjct 1023 TACCCTCAATCGAATCATCTTGCATTGCGACCAAGAAACAGGAGGACATCTGGTTTCTTG 964 Query 111951 GTGTACCAGCATTGAAGAGGGTTGGTGTTGCGTGAATGAACATACCT-TGGGACATCTTG 112009 | ||||| || ||||| | ||| || | |||||| |||| || || | |||||| | Sbjct 963 GGGTACCTGCGTTGAACAAGGTAGGAGAAGCGTGAGTGAA-GTATCTCTTAGACATCAAG 905 Query 112010 TCGTATGTCTCCAAGACAGAATCAATGTCTTCCCCGTGGATGCCGATTGCGACCCGCATG 112069 | ||| ||||| | | | |||||||| || ||||| || |||| ||||| | |||| Sbjct 904 TTGTAGGTCTCGATGGCGCTCTCAATGTCGTCGCCGTGAATACCGACAGCGACTCTCATG 845 Query 112070 AACATGTACTGTGGGGTTTCCATGAGGATGCCATCGAGCCGTTGAAGATAGCTCTTCTCA 112129 | || || ||| || ||||| | ||||||| | | ||| ||| |||| Sbjct 844 ATCAAGTGCTGGGGTCTTTCCGCAATCTTGCCATCCAATCTCAAAAGGTAGGATCTCTCG 785 Query 112130 AGGGTTTTGAGACCAAAGTAA 112150 ||||| |||| || |||||| Sbjct 784 AGGGTCTTGAAGCCGAAGTAA 764 >seq30 Length=26055 Score = 82.4 bits (90), Expect = 1e-10 Identities = 233/352 (66%), Gaps = 6/352 (2%) Strand=Plus/Plus Query 110865 CTTCCCACATGTCAAACTGAAGCACCCCTTGGGACGCGGGAGAACCCTCAAAGGTTTCAT 110924 ||| |||||| ||||| ||||||| ||||| || |||||| || || | | || || Sbjct 2393 CTTTCCACATATCAAATTGAAGCAAACCTTGTGAAATGGGAGACCCATCGTAAGATTGAT 2452 Query 110925 AGGAACCTTGGGCTTCAGCCAATTCACAGCTCGCCTCCAGGGATGCGTGATACATGGTTT 110984 | ||| || || ||||| |||||| |||| | ||| || || ||||||| Sbjct 2453 ACTTCCCTCGGCTTTGTGCCAACTCACAGGATTGTTCCAAAGTTGCATGGTAAATGGTTT 2512 Query 110985 CAAAGATACGAGCATTCATCTCCTTGGCTTCATCTGAATCAAA-TGCGTAGCGGCACAAA 111043 |||| || | || | ||| || | ||| || |||| || || || ||| | Sbjct 2513 CAAATATTTTAATGTTGAGCTCTTTCGACTCAGGAGATCCAAACGGCATA-CGCAACATA 2571 Query 111044 ATAAATACATCCGCGAGACCTTGAACACCCAAACCAATAGGTCTGTGTCGCATATTAGA- 111102 | || ||||| || || ||||||||||| || || || ||||||| | || ||| || Sbjct 2572 AAGAAAACATCAGCAAGTCCTTGAACACCTAAGCCTATGGGTCTGTTTTTCAGATTCGAT 2631 Query 111103 CTTTCGCGCAG-TCTCAACGGGATAAAAATTTCTGTCAATGACTCGGTTTAGATTTTTGG 111161 |||| ||||| | |||| ||||| || | ||||||| || | | ||| | Sbjct 2632 CTTT--CGCAGTTTTCAAGTGGATACTTGTTGATATCAATGATTCTATCCAAATTCCGGC 2689 Query 111162 TAACAATCTTTGTGATTTCATGAAGTTTTTCATAATCAAAAGTGCGAGTCTC 111213 ||| | ||| |||||||| ||||| | ||| |||| | | | |||| Sbjct 2690 AAACCACCTTGCATATTTCATGCAGTTTCAGAAAATTAAAACTTCCATTCTC 2741 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 628027902091200