Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pichia_20membranifaciens_20[genbank_20GCA_5F001950575.1_202016-12- 15] 522 sequences; 11,394,881 total letters Query= NC_028092.1 Length=193301 Score E Sequences producing significant alignments: (Bits) Value seq95 302 6e-77 seq183 123 3e-23 >seq95 Length=34527 Score = 302 bits (334), Expect = 6e-77 Identities = 1136/1759 (65%), Gaps = 51/1759 (3%) Strand=Plus/Minus Query 117836 TCGGAGGTAGTACATCCCCGTCTTGAGCCCCTGCTTCCAGGCATACATATGCATTGAGGA 117895 || |||||||||||| || ||||| | ||||| |||||| | || | ||||| |||| Sbjct 2561 TCTGAGGTAGTACATACCTGTCTTCAACCCCTTCTTCCAACCGTAGAAGTGCATCGAGGT 2502 Query 117896 CAACTTGGAGAGGGTTGGACTTTCCATGAAGAGGTTCATACTTTGGGATTGATCGATGAA 117955 ||||||| | |||||| | | || | || |||||| || || || |||||| | Sbjct 2501 CAACTTGCCCATGGTTGGGTTCTTCAAGTGGATGTTCATGGACTGAGACTGGTCGATGTA 2442 Query 117956 GCGTCCCCGATCCGCCGCCATATCAATCACATCCTTCATCTTGATTTCCCACACAGTCCT 118015 || | || |||||||| || || | ||||| ||| ||||| || ||| | Sbjct 2441 CGCACCTCTGTCAGCCGCCATGTCGATGATCGCCTTCTGTGGGATCTCCCAGACGGTCTT 2382 Query 118016 GTAGAGGTTCTTAATATCATCTGGGATATCCACGATATTTTGGATGGATCCACCCGCCTT 118075 || | || ||| || || | |||||| | | || |||||||| || | Sbjct 2381 ATACAAGTCCTTGATTTCCTGTGGGATGTTTGGAAGGTTCTGGATGGAACCGTTGTCGGA 2322 Query 118076 GACCATGAGATCCTTCATA---TCCTTTGACCAGAGACCAATCTTTTTGAGATC-CTCCA 118131 || ||| | | ||||||| || || ||| || || |||| | || ||| | Sbjct 2321 GATGATGTGGTTCTTCATAGAGTCGTT---CCATAGTCCCATCTCCACCAAGTCTCTCAA 2265 Query 118132 CGAG-ATGCTTATTGACAACAACAAACTCACCCGCGAGGGTGCGTCTCAGA-TAGATATT 118189 | | ||| | | |||| |||||||| || | | ||| ||| ||||| || Sbjct 2264 CATGTATGGGT--TCACAATCTGGAACTCACCGGCCAAAACTCTTCT-AGAGTAGATGTT 2208 Query 118190 GGTCGTGTATGGCTCAAAGCACTCATTGTTACCCAAGATTTGGGCTGTGGAGGCTGTGGG 118249 | ||||||||||| || || || |||| ||| | || || | ||||| || || || Sbjct 2207 CGAGGTGTATGGCTCGAAACATTCGTTGTAACCAAGAATCTGCGAGGTGGAAGCAGTTGG 2148 Query 118250 CATGGGTGCCATGAGAAGGCTGTTACGGAGACCCTTTTCCCTAATGCGTTCCTTGAGAGC 118309 ||| || || | | | ||| | | || | | || || ||||| || | Sbjct 2147 CATTGGGGCAACCAACAAAGAGTTTCTCAACCCGTGGGCTCTGATCTTCTCCTTCAGGGA 2088 Query 118310 GTCCCAGTC------GTAGTTGAGCTTTGTCTCCCCCTGCCACATATCAAACTGGAGGAT 118363 |||||||| || | | |||| || ||| || | || |||||||| | Sbjct 2087 ATCCCAGTCCCATAAGTCGGTAGGCTT---CTTACCC---CAGAGGTCGAACTGGAGCAC 2034 Query 118364 ACCTTGGGACGCTGGCGATCCCTCAAATGTCTCATATGGGCCCTCAACCTCCGCCAATTC 118423 |||||| || ||||| || |||||| | ||||| || || ||||| ||||| || Sbjct 2033 ACCTTGCGATGCTGGTGAGCCCTCATAGGTCTCGTAGGGACCCTCCTTGATTGCCAACTC 1974 Query 118424 GGAGCTCGCCTCGAGGGCTGCGTGATACATTGTTTCAAAAATGCGAGCATTCATTGCCTT 118483 | | ||| || || || || || || |||||||| ||||| | |||| |||| Sbjct 1973 GACGGACGCTTCAAGTGCAGCATGGTAGATTGTTTCGAAAATTTGGATGTTCAACTCCTT 1914 Query 118484 GGCCTCGTCGGAATCAAACGCGAGTCGGCACAAAATAAATACATCCGCGAGACCTTGGAC 118543 ||||| || || || | |||| | | || || | || || | ||||||||| Sbjct 1913 TGCCTCTGGAGAGTCGAAAGGCAGTCTGAGGAGCATGAAAGCGTCGGCCAAACCTTGGAC 1854 Query 118544 ACCGAGGCCAATTGGGCGATGTCTCATATTAGACTTCCGAGCGGTCTCC---ACGGGATA 118600 ||| | |||| || | | |||||| ||||| |||| || |||| || ||||| Sbjct 1853 ACCAACAGCAATCGGTCTGTTTCTCATGTTAGATCTCCGTGC---CTCCGGAACAGGATA 1797 Query 118601 AAAATTCCTATCGATAACCCTATTTAGATTTTTGGTGACAACCTTTGTGATTTCATGAAG 118660 |||| |||||| | | || | || |||| |||||||| | ||| || || | Sbjct 1796 GTAATTGACATCGATGATTTTGTTCAAGTTCTTGGCAACAACCTTGGCGATCTCGTGCAA 1737 Query 118661 CTTTTCGTAATCAAAACTGCGAGTCT---CTTCATT---GACATACTTAGGAAGGGCGAT 118714 || || | | | | | ||| | | ||| | |||| | ||| | || | Sbjct 1736 TTTCTCAAAGTTGTACCAGGAAGTGTGATCGTCACTCTCGACAAAGGCAGGCAACGCAAC 1677 Query 118715 TGACGCCAGATTACACACAGAGGTCTCATCCTTATCAGTGTACTCTATAATTTCCGTGCA 118774 || |||| ||||| |||| | ||||| || || || || | ||| || || Sbjct 1676 CGAAGCCAAGTTACAGACAGCGACTTCATCGTTCGAAGAATATTCGACAATCTCACAACA 1617 Query 118775 CAAGTTTGAACTCTTAATGGTGCCCAAGTTCTTTTGATTTGACTTTGTGTTACACGCATC 118834 |||||| ||| || || | |||||||||| ||| || || ||||||||||| || || Sbjct 1616 CAAGTTGGAAGATTTGATCATACCCAAGTTCTGTTGGTTGGATTTTGTGTTACATGCGTC 1557 Query 118835 CTTGTAAAGCATGTATGGCGTCCCCGTCTCCGTTTGGGACTTGAGAATAGCCTTCCAGA- 118893 |||||| |||||| | || || ||||| || ||||||| | | || | | ||| | Sbjct 1556 CTTGTAGAGCATGAAAGGAGTACCCGTTTCAGTTTGGGCTTCCAAGATCGAGTACCACAA 1497 Query 118894 CATCGGCAGCTGGCACAGTGGCGTTGGCTCGCCCCTCTTCCTCGTACTTTGTGTAGAGGG 118953 | | | || | | || | ||| ||| ||||| ||||| || || Sbjct 1496 CTTTTGTGCCTTG-ATGGTCTTTCTACCTCTGTTTTCTCTTTCGTATTTTGTATATAGCT 1438 Query 118954 CTTCAAACTCTTCACCCACGGCCTCTGAGAGCCCTGGTGCCTTATCTGGGCAGAAGAGAG 119013 |||| ||||| ||||| | | || || | ||||| ||| | |||| |||| |||| Sbjct 1437 CTTCGAACTCGTCACCGTAGACGTCGGACAAGCCTGGGACCTCACTTGGGGAGAAAAGAG 1378 Query 119014 ACCATTGACCACCCTCCTCAACCCGCTTCATGAAGAGGTCTGGGATCCAGAGCGCCGAGA 119073 ||||| | || |||||| | ||||||||| | ||| || ||||| | || | || Sbjct 1377 TCCATTCCTGATTCTGCTCAACTCTCTTCATGAACAAGTCAGGTATCCACAATGCAGGGA 1318 Query 119074 AGAGATCCC-GACAGCGAGCTTCTTCATCCCCCTGATTGAGACGCAACTCCAAAAAGTCC 119132 | | || | | | || |||||| | || || || | || || | ||||| Sbjct 1317 ACAAGTCTCTGGCTCTGAT-TTCTTCCTTACCGTGGTTCTTTCTCACGTCGATGAAGTCG 1259 Query 119133 ATGATATCCGCGTGCCACGGTTCCAGGTACACCGCGATTGACCC----CTTACGACGACC 119188 | |||||| | |||||| || || || || | ||| | | || ||| | ||| Sbjct 1258 AAGATATCGGAGTGCCATGGCTCAAGATAGAGCGCAAAGGCACCTGGTCTTTTGTT-ACC 1200 Query 119189 AGCCTGGTTTACATACCTCGCAGTGGCGTTAAATACACGAAGCATTGGAATGATACCATC 119248 | | |||| ||||| || || ||| ||| || ||||| | ||||||||||||||| | Sbjct 1199 ACCTTGGTCGACATATCTGGCCGTGTTGTTGAAAACACGCATCATTGGAATGATACCGTT 1140 Query 119249 GGATTGGCCATTTGTCCCCCGAAT--ACGAGACTTATTGGCTCTGACATCGTGGATGTGC 119306 ||| || || || || ||| | ||| || ||||||||| | |||||||||| Sbjct 1139 GGAAGTACCGTTGGTACCTGCAATGTAGGAGCCTG--TGGCTCTGATGTTGTGGATGTGC 1082 Query 119307 ATACCAATACCCCCTGCCCACTTTGAGATTTGCGCGCACTCCGTGAGACTGCCGTAGATC 119366 | ||||||||| ||||| ||| ||||| |||| |||| | | | || ||||||| Sbjct 1081 AAACCAATACCACCTGCGGTCTTGGAGATCAGCGCACACTGTTTCAAAGTGTCGTAGATA 1022 Query 119367 CCATCGATCGAGTCACCCTTATTTGCGATGAGGAAGCAGCTCGACATTTGAGGCCTGGGT 119426 || || ||||| ||| | | |||||| | ||| ||| ||||| || || || Sbjct 1021 CCCTCAATCGAATCATCTTGCATTGCGACCAAGAAACAGGAGGACATCTGGTTTCTTGGG 962 Query 119427 GTACCAGCGTTGAAGAGAGTTGGTGTCGCGTGGATGAACATACCT-TGGGACATCTTGTC 119485 ||||| |||||||| | || || | ||||| |||| || || | |||||| || Sbjct 961 GTACCTGCGTTGAACAAGGTAGGAGAAGCGTGAGTGAAG-TATCTCTTAGACATCAAGTT 903 Query 119486 GTAGGTCTCCAAGACGGCGGGAATGTCTTCCCCGTGAATACCGATCGAGACCCGCATAAA 119545 ||||||||| | | || |||||| || ||||||||||||| | ||| | ||| | Sbjct 902 GTAGGTCTCGATGGCGCTCTCAATGTCGTCGCCGTGAATACCGACAGCGACTCTCATGAT 843 Query 119546 CATGTATTGGGGTGTTTCC 119564 || || |||||| ||||| Sbjct 842 CAAGTGCTGGGGTCTTTCC 824 >seq183 Length=27355 Score = 123 bits (136), Expect = 3e-23 Identities = 349/527 (66%), Gaps = 17/527 (3%) Strand=Plus/Minus Query 130015 GGCAAACTCCTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACC 130074 |||||| || ||| | |||||||| || |||| | || |||||||| || || Sbjct 26509 GGCAAAGTCGGTGTGCAAGCCCTCGTCCCGACAGATCAACTCGTTCGAGAACGTCAAGCC 26450 Query 130075 TGGCATGAGACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGAT 130134 |||||||| |||||||||||||||||||| |||| ||| ||||| |||||||| || Sbjct 26449 GGGCATGAGCCCCCGCTTCTTCAACCAGAAGATCGACGCAAACGAGCCCGAGAAGAAAAT 26390 Query 130135 CCCCTCCACACACGCGAACGCAAAGAGACGCTCAGCAAAGGAGCGGGACTTTGT-ATCAA 130193 ||||||||| || ||||| | | ||||| || || | || | |||| | | Sbjct 26389 CCCCTCCACGGCGGCAAACGCCACCAAGCGCTC-GCCAAACAACGCATCCTTGTCGTTGA 26331 Query 130194 ACCACTTCATCGCCCACTGCGCCTTTTTCTCGATACACGGGACGGTCTGGATCGCTTCAA 130253 ||| | | |||||||| ||||| | || ||| ||||||| | | | |||||| | | Sbjct 26330 TCCATCTGAGCGCCCACTCGGCCTTCTCCTTGATGCACGGGATGTTATCGATCGCGTTGA 26271 Query 130254 AGAGTTCCTTCTTTTCTGATGGATCTTTGATGTACTTATCTATGAGTTTTGAATATGTTT 130313 |||| | || || || ||||| || | |||| | || || | || || || | Sbjct 26270 AGAGGTACTCGTTCTCCTTCGGATCCTTCACGTACGTGTCGATCAACAACGAGTACGTCT 26211 Query 130314 CGCCATGGACCAT-TTCATTATGGCACTGATACGCGTAGAAAGAGCGCGCTTCGCTTATC 130372 | |||| | | ||| || | ||| | |||||||| | || || | | Sbjct 26210 CCGAGTGGATGTTCTCCATCAT-GATCTGGAAACCGTAGAAACACTTTGCCTCCGGCACC 26152 Query 130373 TGTACCTCATCTGCAAAATTGTTATTGATATTCTCAAAAACAATTCCATCGGACCCAGCA 130432 || ||||| | | || || | | ||||| ||||| || || || | ||| Sbjct 26151 TGCACCTCTGCGGAGAAGTTCTCCACCAAGTTCTCGTTCACAATCCCGTCCGAAGCGGCA 26092 Query 130433 AAAAACGCCAGGATATACTTT----ATGAA-TTTCTGTTCATTCTCGTTCAGGGTC---T 130484 || ||||||| | ||| | ||||| | ||| || || ||||||| || | Sbjct 26091 AAGAACGCCA----ACACTCTCGAGATGAAGTATCT-CTCGTTGTCGTTCAACCTCTCGT 26037 Query 130485 TCCAGTCGTCAAGATCCTTCGAGAGATCTACCTCCTCCGCAGTCCAA 130531 ||||||||| || ||||| |||||||| | |||||| || |||||| Sbjct 26036 TCCAGTCGTGCAGGTCCTTTGAGAGATCGATCTCCTCGGCGGTCCAA 25990 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 618431164710320