Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pichia_20membranifaciens_20[genbank_20GCA_5F001950575.1_202016-12- 15] 522 sequences; 11,394,881 total letters Query= NC_028112.1 Length=178262 Score E Sequences producing significant alignments: (Bits) Value seq95 178 1e-39 seq97 152 6e-32 seq183 104 3e-17 seq138 100 3e-16 seq468 93.3 5e-14 >seq95 Length=34527 Score = 178 bits (196), Expect = 1e-39 Identities = 1100/1746 (63%), Gaps = 59/1746 (3%) Strand=Plus/Minus Query 80044 AGATAGTACATGCCCGTCTTGAGGCCCTTCTTCCAGCCGTACAGGTGCATAGAACTGAGC 80103 || |||||||| || ||||| | ||||||||||| ||||| | |||||| || | | | Sbjct 2557 AGGTAGTACATACCTGTCTTCAACCCCTTCTTCCAACCGTAGAAGTGCATCGAGGTCAAC 2498 Query 80104 TTCGCAAGTGTGGGGTTCTCCATGAAGATGTTCAGAGACTGAGACTGACAGATGAAAGCC 80163 || | | || ||||||| || | |||||||| ||||||||||| |||| | || Sbjct 2497 TTGCCCATGGTTGGGTTCTTCAAGTGGATGTTCATGGACTGAGACTGGTCGATGTACGCA 2438 Query 80164 CCACGATCTGCCGCCATTTCAATAATTGACTTTTGTGGAATTTCCCATACTGTACGATAC 80223 || | || |||||||| || || || | ||| ||||| || ||||| || || |||| Sbjct 2437 CCTCTGTCAGCCGCCATGTCGATGATCGCCTTCTGTGGGATCTCCCAGACGGTCTTATAC 2378 Query 80224 A---CCTTACGAAGCTCCTCTGGAATGTCCAGA---TTTTGCACACTGCCACCGTCCTTT 80277 | |||| | |||| ||| |||| || || || | || ||||| | Sbjct 2377 AAGTCCTTG---ATTTCCTGTGGGATGTTTGGAAGGTTCTGGA---TGGAACCGTTGTCG 2324 Query 80278 ---ACAATTTGATTTTTCAATTCAGACGT-CCAGACACCAAGCTTGTGCAGATCTTTCAC 80333 | || || || |||| | || ||| ||| | || | || || ||| ||| Sbjct 2323 GAGATGATGTGGTTCTTCA-TAGAGTCGTTCCATAGTCCCATCTCCACCAAGTCTCTCAA 2265 Query 80334 AAGGTGCTTGTTAATCATGACAAACTCTCCCGCGAGGGTGCGACGCAGA-TACAGGTTTG 80392 | || ||| | || ||||| || || | | | ||| || | ||| | Sbjct 2264 CATGTATGGGTTCACAATCTGGAACTCACCGGCCAAAACTCTTCT-AGAGTAGATGTTCG 2206 Query 80393 TAGTGTAAGGCTCAAATGCCTCGTTGTTTCCGAGGATCTGAGCCGTGCTCGCCGTCGGCA 80452 ||||| ||||| || ||||||| || || ||||| | ||| || || |||| Sbjct 2205 AGGTGTATGGCTCGAAACATTCGTTGTAACCAAGAATCTGCGAGGTGGAAGCAGTTGGCA 2146 Query 80453 TCGGGCCGACCAACAGTGAATTCCGCAGGCCGTGCTTCTTGATATCCTCGCGCA---AAT 80509 | ||| | ||||||| || || | || ||||| |||| | ||| || ||| Sbjct 2145 TTGGGGCAACCAACAAAGAGTTTCTCAACCCGTGGGCTCTGATCTTCTCCTTCAGGGAAT 2086 Query 80510 CTGA---CCAAAAATCAACCCCAACGCTG-TGACCCCACATGTCGTGCTGCAAGATGCCC 80565 | | ||| || || | ||| | |||||| | |||| ||| | | || Sbjct 2085 CCCAGTCCCATAAGTCGGT----AGGCTTCTTACCCCAGAGGTCGAACTGGAGCACACCT 2030 Query 80566 TCCGACGCCGGAGACCCCGCGAACGTCTCGTACGGGCCCTCCGTCTTGGCCAGCTCACAC 80625 | ||| || || || ||| | | |||||||| || |||||| | | |||| ||| Sbjct 2029 TGCGATGCTGGTGAGCCCTCATAGGTCTCGTAGGGACCCTCCTTGATTGCCAACTCGACG 1970 Query 80626 GACTCCATAAGGGCCGCGTGATAAATGCACTCAAAGACGCCCTTGTTCACACCGCGCGCC 80685 ||| | ||| || || || || || || || | |||||| | ||| Sbjct 1969 GACGCTTCAAGTGCAGCATGGTAGATTGTTTCGAAAATTTGGATGTTCAACTCCTTTGCC 1910 Query 80686 TGTGGGTCGTCGAACGACAAGCCCATCATCATGAACACGTCAGCCAGGCCCTGAACGCCG 80745 | ||| |||||| | || | | | |||||| |||| |||| || || || || Sbjct 1909 TCTGGAGAGTCGAAAGGCAGTCTGAGGAGCATGAAAGCGTCGGCCAAACCTTGGACACCA 1850 Query 80746 ATGGCGATCGGGCGGTGGCGCTTGTTCGATCGCTCGGCCTCCGGAATTGGGTAAAAGTTA 80805 | || ||||| | || | | |||| |||| | |||||||||| || || | || Sbjct 1849 ACAGCAATCGGTCTGTTTCTCATGTTAGATCTCCGTGCCTCCGGAACAGGATAGTAATTG 1790 Query 80806 TTATCGATGACGCGGTTCAGGTTGCGTGTAACAACCCGTGTAACATCATGAAGTTTCTGA 80865 |||||||| ||||| ||| | ||||||| | | || || | ||||| | Sbjct 1789 ACATCGATGATTTTGTTCAAGTTCTTGGCAACAACCTTGGCGATCTCGTGCAATTTCTCA 1730 Query 80866 AAGTCG-------AATTG-----GTTCCCCTTCACAAATGCCGG-AAGGCTCAGGGACGC 80912 |||| | || || || | || ||||| || || || || | || || Sbjct 1729 AAGTTGTACCAGGAAGTGTGATCGTCACTCTCGACAAAGGCAGGCAACGCA-ACCGAAGC 1671 Query 80913 CAGATTGCACACGGCCACCTCTTCAGCATCTGTAAACTCGACGATTTCCGTGCACAAATT 80972 || || || || || || || || | | | ||||| || || ||||| || Sbjct 1670 CAAGTTACAGACAGCGACTTCATCGTTCGAAGAATATTCGACAATCTCACAACACAAGTT 1611 Query 80973 AGAAGACTTAATTGTACCCAGGTTTTTCTGGTTTGACTTGGCGTTGCAAGCGTCCTTGTA 81032 ||||| || || |||||| ||| | ||||| || || | ||| || ||||||||||| Sbjct 1610 GGAAGATTTGATCATACCCAAGTTCTGTTGGTTGGATTTTGTGTTACATGCGTCCTTGTA 1551 Query 81033 GCACATGTACGGGGTACCGGTCTCGACCTGTGACTTGAGGATGGCGTCCCAAATCTCGCG 81092 | |||| | || ||||| || || || | | | ||| | || ||| | || | Sbjct 1550 GAGCATGAAAGGAGTACCCGTTTCAGTTTGGGCTTCCAAGATCGAGTACCACAACTTTTG 1491 Query 81093 CGCCTTGACCACCTTGCGGAATTTGCCTTCGGCCACATACTTGGCGTA-AGCTTCGTCGA 81151 ||||||| ||| | | || ||| | || || | || |||| | |||| Sbjct 1490 TGCCTTGATGGTCTTTCTACCTCTGTTTTCTCTTTCGTATTTTGTATATAGCT-CTTCGA 1432 Query 81152 ACTTGGCACCGTGAAGTTCAGTGAGGTCTGGGCACTCGTTAGGGCACATCAGGTGCCAGT 81211 ||| | |||||| | || | | | ||||| ||| | ||| | | || ||| | Sbjct 1431 ACTCGTCACCGTAGACGTCGGACAAGCCTGGGACCTCACTTGGGGAGAAAAGAGTCCATT 1372 Query 81212 CGGTGTCGTTCTCTACAGCCTTCATGAAAGCGTCAGGGATCCAGAGGGCGGTGAACAGGT 81271 | | | ||| || ||||||||| |||||| ||||| | || | ||||| || Sbjct 1371 CCTGATTCTGCTCAACTCTCTTCATGAACAAGTCAGGTATCCACAATGCAGGGAACAAGT 1312 Query 81272 CGCGGCAGCGCGCCTCCTCATCACCCTGGTTGAGGCGCAACTCGAGAAAGTCCATGATGT 81331 | | | | || || | ||| ||||| | || |||| ||||| | ||| | Sbjct 1311 CTCTGGCTCTGATTTCTTCCTTACCGTGGTTCTTTCTCACGTCGATGAAGTCGAAGATAT 1252 Query 81332 CCGCATGCCATGGCTCCAGATACACGGCGATCGACCC----CTTGCGACGGCCACCCTGG 81387 | | ||||||||||| ||||| | || | | || ||| | ||||| ||| Sbjct 1251 CGGAGTGCCATGGCTCAAGATAGAGCGCAAAGGCACCTGGTCTTTTGTTA-CCACCTTGG 1193 Query 81388 TTGACGTAACGGGCAGTCGCGTTAAATACACGCAACATAGGGATGATACCATCTGACTGA 81447 | ||| || | ||| || ||| || ||||||| ||| || |||||||| | || | Sbjct 1192 TCGACATATCTGGCCGTGTTGTTGAAAACACGCATCATTGGAATGATACCGTTGGAAGTA 1133 Query 81448 CCGTTCGTACCCACGATACGCGACCCCTTGGCGCGCACCTTGCTGAT-TGAAAGACCGAT 81506 ||||| ||||| | || || || |||| | | ||| ||| || || ||| || Sbjct 1132 CCGTTGGTACCTGCAATGTAGGAGCCTGTGGCTCTGATGTTGTGGATGTGCAA-ACCAAT 1074 Query 81507 GCCACCTGACCACTTTGAAATCTGAGCACACCGGTTCATGGTCTCATAAATTCCCTCGAT 81566 ||||||| ||| || ||| | |||||| | |||| || || || || ||||| || Sbjct 1073 ACCACCTGCGGTCTTGGAGATCAGCGCACACTGTTTCAAAGTGTCGTAGATACCCTCAAT 1014 Query 81567 GCTATCTTTTTTCATGTCAAGCAAGAAACAGCTTGACATCTGAGGGCTTTTTGAG---CC 81623 ||| | || ||| | | |||||||||| |||||||| | || ||| | || Sbjct 1013 CGAATCATCTTGCATTGCGACCAAGAAACAGGAGGACATCTG---GTTTCTTGGGGTACC 957 Query 81624 GGCATTGAACAGTGTTGGGGTCGCGTGAATGAAATAACGGTTTGACATCAGGTCATAGGT 81683 || ||||||| || || | |||||| |||| || | || ||||||| || ||||| Sbjct 956 TGCGTTGAACAAGGTAGGAGAAGCGTGAGTGAAGTATCTCTTAGACATCAAGTTGTAGGT 897 Query 81684 TTCCTTGACGCGTGGAATATCGTCACCGTGAATACCGATAGCTACACGCATAAACATGTA 81743 || || ||| ||| ||||| ||||||||||||| ||| || | ||| | || || Sbjct 896 CTCGATGGCGCTCTCAATGTCGTCGCCGTGAATACCGACAGCGACTCTCATGATCAAGTG 837 Query 81744 CTGGGG 81749 |||||| Sbjct 836 CTGGGG 831 >seq97 Length=66064 Score = 152 bits (168), Expect = 6e-32 Identities = 161/212 (76%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 |||||||| || ||||| || |||||||| ||||||||||| |||||||||||||| Sbjct 5246 ATGCAAATTTTCGTCAAAACCCTTACCGGTAAGACTATTACCCTTGAGGTTGAGTCTTCC 5305 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 || | |||| ||| | ||| ||||| || |||||||| || ||||| || |||||| Sbjct 5306 GACACTATTGACAATGTCAAGCAAAAAATCCAAGACAAGGAAGGTATTCCACCTGACCAG 5365 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 || | | || || |||||||||||| | || |||| | | || || | ||||| || Sbjct 5366 CAAAGATTGATCTTCGCTGGTAAGCAATTGGAAGATGGTAGAACTTTATCCGACTACAAC 5425 Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTT 27617 ||||||||||||||||| | || | ||||| Sbjct 5426 ATCCAAAAGGAATCCACTTTGCACTTGGTCTT 5457 >seq183 Length=27355 Score = 104 bits (114), Expect = 3e-17 Identities = 146/203 (72%), Gaps = 3/203 (1%) Strand=Plus/Plus Query 64666 AAGGCTGAATGGGCCATCCGGTGGATGAAT--CGTGGGT-CGTCGTTTGGTCAGCGTCTC 64722 ||||| || ||||| || | ||||| || | || | ||| |||||| |||| | Sbjct 26306 AAGGCCGAGTGGGCGCTCAGATGGATCAACGACAAGGATGCGTTGTTTGGCGAGCGCTTG 26365 Query 64723 GCAGCTTTTGCCTGTGTGGAAGGAATTTTCTTTTCTGGGTCATTCTGTTCTATTTTCTGG 64782 | || |||||| ||||| || |||||||| || || || || || || |||||| Sbjct 26366 GTGGCGTTTGCCGCCGTGGAGGGGATTTTCTTCTCGGGCTCGTTTGCGTCGATCTTCTGG 26425 Query 64783 CTAAAAAAGCGGGGCCTGATGCCAGGTCTGTCGTTTTCGAACGAGCTGATCTCTCGGGAC 64842 | || |||||||| || ||||| || || |||| ||||||||| |||||| ||||||| Sbjct 26426 TTGAAGAAGCGGGGGCTCATGCCCGGCTTGACGTTCTCGAACGAGTTGATCTGTCGGGAC 26485 Query 64843 GAGGGGCTCCACCAAGAATTTGC 64865 ||||| | ||| || ||||| Sbjct 26486 GAGGGCTTGCACACCGACTTTGC 26508 >seq138 Length=17849 Score = 100 bits (110), Expect = 3e-16 Identities = 150/213 (70%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 |||||||| ||||||||||| | || || ||||| ||||| | || || || || | Sbjct 9501 ATGCAAATTTTTGTCAAGACCTTAACTGGTAAGACCATTACCTTGGAAGTCGAATCTTCT 9560 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 || | || | ||| | ||| || || || || ||||| || || || || |||||| Sbjct 9561 GACACTATCGATAATGTCAAGCAAAAGATCCAAGATAAGGAAGGTATCCCACCTGACCAG 9620 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 || | || |||||||| ||||||||| | || |||| | | || | | ||||| || Sbjct 9621 CAAAGACTTATTTTTGCCGGTAAGCAATTAGAAGATGGTAGAACTTTGTCCGACTACAAC 9680 Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTG 27618 ||||||| ||||| || | || | |||||| Sbjct 9681 ATCCAAAAAGAATCAACCTTACACTTGGTCTTG 9713 >seq468 Length=160 Score = 93.3 bits (102), Expect = 5e-14 Identities = 89/114 (78%), Gaps = 0/114 (0%) Strand=Plus/Plus Query 27490 AAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAGCAGCGTCTAATTTTTGCTGGTAAG 27549 || || ||||||||||| || ||||| |||||||||||| | || ||||| |||||||| Sbjct 16 AAGATCCAGGACAAGGAAGGTATTCCACCAGACCAGCAGAGACTTATTTTCGCTGGTAAA 75 Query 27550 CAACTCGAGGATGATCGTACCCTAGCAGACTATAATGTCCAAAAGGAATCCACT 27603 ||||| || || | | ||| | | ||||| || ||||||||||||| ||| Sbjct 76 CAACTAGAAGACGGAAGAACCTTGTCTGACTACAACATCCAAAAGGAATCGACT 129 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 570306678724640