Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pichia_20membranifaciens_20[genbank_20GCA_5F001950575.1_202016-12-
15] 522 sequences; 11,394,881 total letters
Query= NC_028112.1
Length=178262
Score E
Sequences producing significant alignments: (Bits) Value
seq95 178 1e-39
seq97 152 6e-32
seq183 104 3e-17
seq138 100 3e-16
seq468 93.3 5e-14
>seq95
Length=34527
Score = 178 bits (196), Expect = 1e-39
Identities = 1100/1746 (63%), Gaps = 59/1746 (3%)
Strand=Plus/Minus
Query 80044 AGATAGTACATGCCCGTCTTGAGGCCCTTCTTCCAGCCGTACAGGTGCATAGAACTGAGC 80103
|| |||||||| || ||||| | ||||||||||| ||||| | |||||| || | | |
Sbjct 2557 AGGTAGTACATACCTGTCTTCAACCCCTTCTTCCAACCGTAGAAGTGCATCGAGGTCAAC 2498
Query 80104 TTCGCAAGTGTGGGGTTCTCCATGAAGATGTTCAGAGACTGAGACTGACAGATGAAAGCC 80163
|| | | || ||||||| || | |||||||| ||||||||||| |||| | ||
Sbjct 2497 TTGCCCATGGTTGGGTTCTTCAAGTGGATGTTCATGGACTGAGACTGGTCGATGTACGCA 2438
Query 80164 CCACGATCTGCCGCCATTTCAATAATTGACTTTTGTGGAATTTCCCATACTGTACGATAC 80223
|| | || |||||||| || || || | ||| ||||| || ||||| || || ||||
Sbjct 2437 CCTCTGTCAGCCGCCATGTCGATGATCGCCTTCTGTGGGATCTCCCAGACGGTCTTATAC 2378
Query 80224 A---CCTTACGAAGCTCCTCTGGAATGTCCAGA---TTTTGCACACTGCCACCGTCCTTT 80277
| |||| | |||| ||| |||| || || || | || ||||| |
Sbjct 2377 AAGTCCTTG---ATTTCCTGTGGGATGTTTGGAAGGTTCTGGA---TGGAACCGTTGTCG 2324
Query 80278 ---ACAATTTGATTTTTCAATTCAGACGT-CCAGACACCAAGCTTGTGCAGATCTTTCAC 80333
| || || || |||| | || ||| ||| | || | || || ||| |||
Sbjct 2323 GAGATGATGTGGTTCTTCA-TAGAGTCGTTCCATAGTCCCATCTCCACCAAGTCTCTCAA 2265
Query 80334 AAGGTGCTTGTTAATCATGACAAACTCTCCCGCGAGGGTGCGACGCAGA-TACAGGTTTG 80392
| || ||| | || ||||| || || | | | ||| || | ||| |
Sbjct 2264 CATGTATGGGTTCACAATCTGGAACTCACCGGCCAAAACTCTTCT-AGAGTAGATGTTCG 2206
Query 80393 TAGTGTAAGGCTCAAATGCCTCGTTGTTTCCGAGGATCTGAGCCGTGCTCGCCGTCGGCA 80452
||||| ||||| || ||||||| || || ||||| | ||| || || ||||
Sbjct 2205 AGGTGTATGGCTCGAAACATTCGTTGTAACCAAGAATCTGCGAGGTGGAAGCAGTTGGCA 2146
Query 80453 TCGGGCCGACCAACAGTGAATTCCGCAGGCCGTGCTTCTTGATATCCTCGCGCA---AAT 80509
| ||| | ||||||| || || | || ||||| |||| | ||| || |||
Sbjct 2145 TTGGGGCAACCAACAAAGAGTTTCTCAACCCGTGGGCTCTGATCTTCTCCTTCAGGGAAT 2086
Query 80510 CTGA---CCAAAAATCAACCCCAACGCTG-TGACCCCACATGTCGTGCTGCAAGATGCCC 80565
| | ||| || || | ||| | |||||| | |||| ||| | | ||
Sbjct 2085 CCCAGTCCCATAAGTCGGT----AGGCTTCTTACCCCAGAGGTCGAACTGGAGCACACCT 2030
Query 80566 TCCGACGCCGGAGACCCCGCGAACGTCTCGTACGGGCCCTCCGTCTTGGCCAGCTCACAC 80625
| ||| || || || ||| | | |||||||| || |||||| | | |||| |||
Sbjct 2029 TGCGATGCTGGTGAGCCCTCATAGGTCTCGTAGGGACCCTCCTTGATTGCCAACTCGACG 1970
Query 80626 GACTCCATAAGGGCCGCGTGATAAATGCACTCAAAGACGCCCTTGTTCACACCGCGCGCC 80685
||| | ||| || || || || || || || | |||||| | |||
Sbjct 1969 GACGCTTCAAGTGCAGCATGGTAGATTGTTTCGAAAATTTGGATGTTCAACTCCTTTGCC 1910
Query 80686 TGTGGGTCGTCGAACGACAAGCCCATCATCATGAACACGTCAGCCAGGCCCTGAACGCCG 80745
| ||| |||||| | || | | | |||||| |||| |||| || || || ||
Sbjct 1909 TCTGGAGAGTCGAAAGGCAGTCTGAGGAGCATGAAAGCGTCGGCCAAACCTTGGACACCA 1850
Query 80746 ATGGCGATCGGGCGGTGGCGCTTGTTCGATCGCTCGGCCTCCGGAATTGGGTAAAAGTTA 80805
| || ||||| | || | | |||| |||| | |||||||||| || || | ||
Sbjct 1849 ACAGCAATCGGTCTGTTTCTCATGTTAGATCTCCGTGCCTCCGGAACAGGATAGTAATTG 1790
Query 80806 TTATCGATGACGCGGTTCAGGTTGCGTGTAACAACCCGTGTAACATCATGAAGTTTCTGA 80865
|||||||| ||||| ||| | ||||||| | | || || | ||||| |
Sbjct 1789 ACATCGATGATTTTGTTCAAGTTCTTGGCAACAACCTTGGCGATCTCGTGCAATTTCTCA 1730
Query 80866 AAGTCG-------AATTG-----GTTCCCCTTCACAAATGCCGG-AAGGCTCAGGGACGC 80912
|||| | || || || | || ||||| || || || || | || ||
Sbjct 1729 AAGTTGTACCAGGAAGTGTGATCGTCACTCTCGACAAAGGCAGGCAACGCA-ACCGAAGC 1671
Query 80913 CAGATTGCACACGGCCACCTCTTCAGCATCTGTAAACTCGACGATTTCCGTGCACAAATT 80972
|| || || || || || || || | | | ||||| || || ||||| ||
Sbjct 1670 CAAGTTACAGACAGCGACTTCATCGTTCGAAGAATATTCGACAATCTCACAACACAAGTT 1611
Query 80973 AGAAGACTTAATTGTACCCAGGTTTTTCTGGTTTGACTTGGCGTTGCAAGCGTCCTTGTA 81032
||||| || || |||||| ||| | ||||| || || | ||| || |||||||||||
Sbjct 1610 GGAAGATTTGATCATACCCAAGTTCTGTTGGTTGGATTTTGTGTTACATGCGTCCTTGTA 1551
Query 81033 GCACATGTACGGGGTACCGGTCTCGACCTGTGACTTGAGGATGGCGTCCCAAATCTCGCG 81092
| |||| | || ||||| || || || | | | ||| | || ||| | || |
Sbjct 1550 GAGCATGAAAGGAGTACCCGTTTCAGTTTGGGCTTCCAAGATCGAGTACCACAACTTTTG 1491
Query 81093 CGCCTTGACCACCTTGCGGAATTTGCCTTCGGCCACATACTTGGCGTA-AGCTTCGTCGA 81151
||||||| ||| | | || ||| | || || | || |||| | ||||
Sbjct 1490 TGCCTTGATGGTCTTTCTACCTCTGTTTTCTCTTTCGTATTTTGTATATAGCT-CTTCGA 1432
Query 81152 ACTTGGCACCGTGAAGTTCAGTGAGGTCTGGGCACTCGTTAGGGCACATCAGGTGCCAGT 81211
||| | |||||| | || | | | ||||| ||| | ||| | | || ||| |
Sbjct 1431 ACTCGTCACCGTAGACGTCGGACAAGCCTGGGACCTCACTTGGGGAGAAAAGAGTCCATT 1372
Query 81212 CGGTGTCGTTCTCTACAGCCTTCATGAAAGCGTCAGGGATCCAGAGGGCGGTGAACAGGT 81271
| | | ||| || ||||||||| |||||| ||||| | || | ||||| ||
Sbjct 1371 CCTGATTCTGCTCAACTCTCTTCATGAACAAGTCAGGTATCCACAATGCAGGGAACAAGT 1312
Query 81272 CGCGGCAGCGCGCCTCCTCATCACCCTGGTTGAGGCGCAACTCGAGAAAGTCCATGATGT 81331
| | | | || || | ||| ||||| | || |||| ||||| | ||| |
Sbjct 1311 CTCTGGCTCTGATTTCTTCCTTACCGTGGTTCTTTCTCACGTCGATGAAGTCGAAGATAT 1252
Query 81332 CCGCATGCCATGGCTCCAGATACACGGCGATCGACCC----CTTGCGACGGCCACCCTGG 81387
| | ||||||||||| ||||| | || | | || ||| | ||||| |||
Sbjct 1251 CGGAGTGCCATGGCTCAAGATAGAGCGCAAAGGCACCTGGTCTTTTGTTA-CCACCTTGG 1193
Query 81388 TTGACGTAACGGGCAGTCGCGTTAAATACACGCAACATAGGGATGATACCATCTGACTGA 81447
| ||| || | ||| || ||| || ||||||| ||| || |||||||| | || |
Sbjct 1192 TCGACATATCTGGCCGTGTTGTTGAAAACACGCATCATTGGAATGATACCGTTGGAAGTA 1133
Query 81448 CCGTTCGTACCCACGATACGCGACCCCTTGGCGCGCACCTTGCTGAT-TGAAAGACCGAT 81506
||||| ||||| | || || || |||| | | ||| ||| || || ||| ||
Sbjct 1132 CCGTTGGTACCTGCAATGTAGGAGCCTGTGGCTCTGATGTTGTGGATGTGCAA-ACCAAT 1074
Query 81507 GCCACCTGACCACTTTGAAATCTGAGCACACCGGTTCATGGTCTCATAAATTCCCTCGAT 81566
||||||| ||| || ||| | |||||| | |||| || || || || ||||| ||
Sbjct 1073 ACCACCTGCGGTCTTGGAGATCAGCGCACACTGTTTCAAAGTGTCGTAGATACCCTCAAT 1014
Query 81567 GCTATCTTTTTTCATGTCAAGCAAGAAACAGCTTGACATCTGAGGGCTTTTTGAG---CC 81623
||| | || ||| | | |||||||||| |||||||| | || ||| | ||
Sbjct 1013 CGAATCATCTTGCATTGCGACCAAGAAACAGGAGGACATCTG---GTTTCTTGGGGTACC 957
Query 81624 GGCATTGAACAGTGTTGGGGTCGCGTGAATGAAATAACGGTTTGACATCAGGTCATAGGT 81683
|| ||||||| || || | |||||| |||| || | || ||||||| || |||||
Sbjct 956 TGCGTTGAACAAGGTAGGAGAAGCGTGAGTGAAGTATCTCTTAGACATCAAGTTGTAGGT 897
Query 81684 TTCCTTGACGCGTGGAATATCGTCACCGTGAATACCGATAGCTACACGCATAAACATGTA 81743
|| || ||| ||| ||||| ||||||||||||| ||| || | ||| | || ||
Sbjct 896 CTCGATGGCGCTCTCAATGTCGTCGCCGTGAATACCGACAGCGACTCTCATGATCAAGTG 837
Query 81744 CTGGGG 81749
||||||
Sbjct 836 CTGGGG 831
>seq97
Length=66064
Score = 152 bits (168), Expect = 6e-32
Identities = 161/212 (76%), Gaps = 0/212 (0%)
Strand=Plus/Plus
Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465
|||||||| || ||||| || |||||||| ||||||||||| ||||||||||||||
Sbjct 5246 ATGCAAATTTTCGTCAAAACCCTTACCGGTAAGACTATTACCCTTGAGGTTGAGTCTTCC 5305
Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525
|| | |||| ||| | ||| ||||| || |||||||| || ||||| || ||||||
Sbjct 5306 GACACTATTGACAATGTCAAGCAAAAAATCCAAGACAAGGAAGGTATTCCACCTGACCAG 5365
Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585
|| | | || || |||||||||||| | || |||| | | || || | ||||| ||
Sbjct 5366 CAAAGATTGATCTTCGCTGGTAAGCAATTGGAAGATGGTAGAACTTTATCCGACTACAAC 5425
Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTT 27617
||||||||||||||||| | || | |||||
Sbjct 5426 ATCCAAAAGGAATCCACTTTGCACTTGGTCTT 5457
>seq183
Length=27355
Score = 104 bits (114), Expect = 3e-17
Identities = 146/203 (72%), Gaps = 3/203 (1%)
Strand=Plus/Plus
Query 64666 AAGGCTGAATGGGCCATCCGGTGGATGAAT--CGTGGGT-CGTCGTTTGGTCAGCGTCTC 64722
||||| || ||||| || | ||||| || | || | ||| |||||| |||| |
Sbjct 26306 AAGGCCGAGTGGGCGCTCAGATGGATCAACGACAAGGATGCGTTGTTTGGCGAGCGCTTG 26365
Query 64723 GCAGCTTTTGCCTGTGTGGAAGGAATTTTCTTTTCTGGGTCATTCTGTTCTATTTTCTGG 64782
| || |||||| ||||| || |||||||| || || || || || || ||||||
Sbjct 26366 GTGGCGTTTGCCGCCGTGGAGGGGATTTTCTTCTCGGGCTCGTTTGCGTCGATCTTCTGG 26425
Query 64783 CTAAAAAAGCGGGGCCTGATGCCAGGTCTGTCGTTTTCGAACGAGCTGATCTCTCGGGAC 64842
| || |||||||| || ||||| || || |||| ||||||||| |||||| |||||||
Sbjct 26426 TTGAAGAAGCGGGGGCTCATGCCCGGCTTGACGTTCTCGAACGAGTTGATCTGTCGGGAC 26485
Query 64843 GAGGGGCTCCACCAAGAATTTGC 64865
||||| | ||| || |||||
Sbjct 26486 GAGGGCTTGCACACCGACTTTGC 26508
>seq138
Length=17849
Score = 100 bits (110), Expect = 3e-16
Identities = 150/213 (70%), Gaps = 0/213 (0%)
Strand=Plus/Plus
Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465
|||||||| ||||||||||| | || || ||||| ||||| | || || || || |
Sbjct 9501 ATGCAAATTTTTGTCAAGACCTTAACTGGTAAGACCATTACCTTGGAAGTCGAATCTTCT 9560
Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525
|| | || | ||| | ||| || || || || ||||| || || || || ||||||
Sbjct 9561 GACACTATCGATAATGTCAAGCAAAAGATCCAAGATAAGGAAGGTATCCCACCTGACCAG 9620
Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585
|| | || |||||||| ||||||||| | || |||| | | || | | ||||| ||
Sbjct 9621 CAAAGACTTATTTTTGCCGGTAAGCAATTAGAAGATGGTAGAACTTTGTCCGACTACAAC 9680
Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTG 27618
||||||| ||||| || | || | ||||||
Sbjct 9681 ATCCAAAAAGAATCAACCTTACACTTGGTCTTG 9713
>seq468
Length=160
Score = 93.3 bits (102), Expect = 5e-14
Identities = 89/114 (78%), Gaps = 0/114 (0%)
Strand=Plus/Plus
Query 27490 AAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAGCAGCGTCTAATTTTTGCTGGTAAG 27549
|| || ||||||||||| || ||||| |||||||||||| | || ||||| ||||||||
Sbjct 16 AAGATCCAGGACAAGGAAGGTATTCCACCAGACCAGCAGAGACTTATTTTCGCTGGTAAA 75
Query 27550 CAACTCGAGGATGATCGTACCCTAGCAGACTATAATGTCCAAAAGGAATCCACT 27603
||||| || || | | ||| | | ||||| || ||||||||||||| |||
Sbjct 76 CAACTAGAAGACGGAAGAACCTTGTCTGACTACAACATCCAAAAGGAATCGACT 129
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 570306678724640
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