Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pichia_20membranifaciens_20[genbank_20GCA_5F001950575.1_202016-12- 15] 522 sequences; 11,394,881 total letters Query= NC_028461.1 Length=127011 Score E Sequences producing significant alignments: (Bits) Value seq175 131 1e-25 >seq175 Length=70746 Score = 131 bits (144), Expect = 1e-25 Identities = 427/654 (65%), Gaps = 27/654 (4%) Strand=Plus/Plus Query 29897 TAGACGTGAGCGTCTCCCAGGTTGTGGACAAACTCTCCCGGTTCTAGCCCGGTGACGTGA 29956 || ||||| ||||| |||| ||| ||||||||||| || || | | ||| Sbjct 32038 TACACGTGGGCGTCACCCATAACGTGTACAAACTCTCCGGGCTCCATGTCTACGACCATT 32097 Query 29957 GCCATCATGTACGTGAGGAGAGAGTAGCTGGCGATGTTAAAGGGTACCCCGAGCCCCATG 30016 || |||||||| ||||| | | |||| ||||||||| ||||| || || | |||||| Sbjct 32098 GCGATCATGTAGGTGAGCAAGGCGTAGGAGGCGATGTTGAAGGGCACGCCCAAGCCCATG 32157 Query 30017 TCCCCCGACCTCTGGTAGAGCTGACACGAGAGCT----CT---CCG---TCG-----CTC 30061 || | || |||||||| | ||| || |||| || ||| ||| ||| Sbjct 32158 TCGCAGGATCTCTGGTACATCTGGCAGCTGAGCCGAGGCTTGCCCGATTTCGGGAAGCTC 32217 Query 30062 ACGTAAAACTGACACATGGCGTGGCACGGAGGAAGAGCCATGAGGCCCAAGTCTTTGGGG 30121 ||||| ||||| || | ||||||| || || | ||||| || | ||| Sbjct 32218 ACGTAGAACTGGCAGAACACGTGGCAGGGTGGCAAGGCCATCTCCTTGAACGCCGGCGGG 32277 Query 30122 TTCCAGGCGCACACGATGATGCGCCTGTCTTCTGGGTTGTTCCTGATGAGGTCCACGGCG 30181 ||||| ||| ||| |||||| | ||||| | ||| || || | | || | | | Sbjct 32278 TTCCACGCGGACATGATGATTCTTCTGTCATATGGATTTGTCTTCAACGTGTGTATGATG 32337 Query 30182 TTTTGCAGCTGATCCACCCCCATCCCCGAGTAGTCTGC-CCTCATGTCCGTGTACTCTGC 30240 ||||| || ||| || ||||||||||| | || ||| |||||||||| Sbjct 32338 GACGCGAGCTGGTCGTAGCCCTGGCCAGAGTAGTCTGCGTCGCA-ATCCTTGTACTCTGC 32396 Query 30241 TCCGAAATGCCTCCACTGGAACCCGTACACCGGTCCCAGGTCTCCCTCT-TCCCTGTGCT 30299 ||| || || ||||||||||| ||||| || || |||| ||| |||||| | | | | | Sbjct 32397 TCCAAAGTGTCTCCACTGGAAGCCGTAGACGGGACCCAAGTCGCCCTCTCTGCGGGAGGT 32456 Query 30300 CGAAGCCCCTCTTGTCCAAAAAGTCTCTGGAACCGTTGGCGTCCCAGATCTTTACCCCCT 30359 | |||||| ||| | | || | || |||||| | |||||||| || || || | Sbjct 32457 C-AAGCCCAGGGAGTCGAGGTACTCCCGTGAGCCGTTGCCTTCCCAGATTTTGACGCCTT 32515 Query 30360 TCTCAGAGAGCTCTTTGGAGTTTGTGGACCCTCTGACGAACCACAGCAGCTCCTCCACGA 30419 | | || ||| || | || ||| || || || |||||||| || || | | || Sbjct 32516 TTGCGGAAAGCAGCTTTGCGTCTGTCGAGCCGTGCACAAACCACAGGAGTTCGTGGAGGA 32575 Query 30420 CGGCCTTCCAAAAGACCCTCTTGGTCGTGAGGAGGGGAAACTGTCCCTT----GAGGCCG 30475 | ||||| ||||| |||| || || | || || || |||||| | |||| || Sbjct 32576 TGCCCTTCATGAAGACTTTCTTTGTGGTCAACAGAGGGAA-TGTCCCATCTGAGAGGTCG 32634 Query 30476 TACCTGGCCT---GAGAACCAAACACGGACAAGACTCCCGTGCCCGTCCTGTCT 30526 ||||| || | | |||| | ||| | |||||||| ||||||||| Sbjct 32635 AACCTGAGCTGTGGTGGCGCAAAAAGGGAGTACGTGCCCGTGCCAGTCCTGTCT 32688 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 406307815104024