Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pichia_20membranifaciens_20[genbank_20GCA_5F001950575.1_202016-12-
15] 522 sequences; 11,394,881 total letters
Query= NC_028461.1
Length=127011
Score E
Sequences producing significant alignments: (Bits) Value
seq175 131 1e-25
>seq175
Length=70746
Score = 131 bits (144), Expect = 1e-25
Identities = 427/654 (65%), Gaps = 27/654 (4%)
Strand=Plus/Plus
Query 29897 TAGACGTGAGCGTCTCCCAGGTTGTGGACAAACTCTCCCGGTTCTAGCCCGGTGACGTGA 29956
|| ||||| ||||| |||| ||| ||||||||||| || || | | |||
Sbjct 32038 TACACGTGGGCGTCACCCATAACGTGTACAAACTCTCCGGGCTCCATGTCTACGACCATT 32097
Query 29957 GCCATCATGTACGTGAGGAGAGAGTAGCTGGCGATGTTAAAGGGTACCCCGAGCCCCATG 30016
|| |||||||| ||||| | | |||| ||||||||| ||||| || || | ||||||
Sbjct 32098 GCGATCATGTAGGTGAGCAAGGCGTAGGAGGCGATGTTGAAGGGCACGCCCAAGCCCATG 32157
Query 30017 TCCCCCGACCTCTGGTAGAGCTGACACGAGAGCT----CT---CCG---TCG-----CTC 30061
|| | || |||||||| | ||| || |||| || ||| ||| |||
Sbjct 32158 TCGCAGGATCTCTGGTACATCTGGCAGCTGAGCCGAGGCTTGCCCGATTTCGGGAAGCTC 32217
Query 30062 ACGTAAAACTGACACATGGCGTGGCACGGAGGAAGAGCCATGAGGCCCAAGTCTTTGGGG 30121
||||| ||||| || | ||||||| || || | ||||| || | |||
Sbjct 32218 ACGTAGAACTGGCAGAACACGTGGCAGGGTGGCAAGGCCATCTCCTTGAACGCCGGCGGG 32277
Query 30122 TTCCAGGCGCACACGATGATGCGCCTGTCTTCTGGGTTGTTCCTGATGAGGTCCACGGCG 30181
||||| ||| ||| |||||| | ||||| | ||| || || | | || | | |
Sbjct 32278 TTCCACGCGGACATGATGATTCTTCTGTCATATGGATTTGTCTTCAACGTGTGTATGATG 32337
Query 30182 TTTTGCAGCTGATCCACCCCCATCCCCGAGTAGTCTGC-CCTCATGTCCGTGTACTCTGC 30240
||||| || ||| || ||||||||||| | || ||| ||||||||||
Sbjct 32338 GACGCGAGCTGGTCGTAGCCCTGGCCAGAGTAGTCTGCGTCGCA-ATCCTTGTACTCTGC 32396
Query 30241 TCCGAAATGCCTCCACTGGAACCCGTACACCGGTCCCAGGTCTCCCTCT-TCCCTGTGCT 30299
||| || || ||||||||||| ||||| || || |||| ||| |||||| | | | | |
Sbjct 32397 TCCAAAGTGTCTCCACTGGAAGCCGTAGACGGGACCCAAGTCGCCCTCTCTGCGGGAGGT 32456
Query 30300 CGAAGCCCCTCTTGTCCAAAAAGTCTCTGGAACCGTTGGCGTCCCAGATCTTTACCCCCT 30359
| |||||| ||| | | || | || |||||| | |||||||| || || || |
Sbjct 32457 C-AAGCCCAGGGAGTCGAGGTACTCCCGTGAGCCGTTGCCTTCCCAGATTTTGACGCCTT 32515
Query 30360 TCTCAGAGAGCTCTTTGGAGTTTGTGGACCCTCTGACGAACCACAGCAGCTCCTCCACGA 30419
| | || ||| || | || ||| || || || |||||||| || || | | ||
Sbjct 32516 TTGCGGAAAGCAGCTTTGCGTCTGTCGAGCCGTGCACAAACCACAGGAGTTCGTGGAGGA 32575
Query 30420 CGGCCTTCCAAAAGACCCTCTTGGTCGTGAGGAGGGGAAACTGTCCCTT----GAGGCCG 30475
| ||||| ||||| |||| || || | || || || |||||| | |||| ||
Sbjct 32576 TGCCCTTCATGAAGACTTTCTTTGTGGTCAACAGAGGGAA-TGTCCCATCTGAGAGGTCG 32634
Query 30476 TACCTGGCCT---GAGAACCAAACACGGACAAGACTCCCGTGCCCGTCCTGTCT 30526
||||| || | | |||| | ||| | |||||||| |||||||||
Sbjct 32635 AACCTGAGCTGTGGTGGCGCAAAAAGGGAGTACGTGCCCGTGCCAGTCCTGTCT 32688
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 406307815104024
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |