Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pichia_20membranifaciens_20[genbank_20GCA_5F001950575.1_202016-12-
15] 522 sequences; 11,394,881 total letters
Query= NC_028491.1
Length=98392
Score E
Sequences producing significant alignments: (Bits) Value
seq138 95.1 8e-15
seq468 84.2 1e-11
>seq138
Length=17849
Score = 95.1 bits (104), Expect = 8e-15
Identities = 166/242 (69%), Gaps = 10/242 (4%)
Strand=Plus/Minus
Query 34480 CCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAA 34539
|| ||||| | | ||| ||||| || | || || ||||| ||||| || || ||
Sbjct 9727 CCACCTCTCAATCTCAAGACCAAGTGTAAGGTTGATTCTTTTTGGATGTTGTAGTCGGAC 9668
Query 34540 AGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGC 34599
| |||| | ||||| | ||| ||||||||||| || | | || ||||| || ||
Sbjct 9667 AAAGTTCTACCATCTTCTAATTGCTTACCGGCAAAAATAAGTCTTTGCTGGTCAGGTGGG 9608
Query 34600 ACTCCCTCCTTGTCTGTGATCTTTTGTT-----TTAACGATAAAATTGTGTCTTCGCTCT 34654
| || ||||| ||| ||||||||| | ||| ||||| ||||| |
Sbjct 9607 ATACCTTCCTTATCTTGGATCTTTTGCTTGACATTATCGATA-----GTGTCAGAAGATT 9553
Query 34655 CCACTTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCATGTTGATTG 34714
| ||||||| ||| || || ||||| ||||| || || |||||||| ||||| |||| ||
Sbjct 9552 CGACTTCCAAGGTAATGGTCTTACCAGTTAAGGTCTTGACAAAAATTTGCATCTTGACTG 9493
Query 34715 TA 34716
||
Sbjct 9492 TA 9491
>seq468
Length=160
Score = 84.2 bits (92), Expect = 1e-11
Identities = 108/149 (72%), Gaps = 0/149 (0%)
Strand=Plus/Minus
Query 34480 CCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAA 34539
|| ||||| | | ||||||||| || | ||| |||||||| ||||| || || ||
Sbjct 158 CCACCTCTCAATCTCAACACCAAGTGCAAAGTCGATTCCTTTTGGATGTTGTAGTCAGAC 99
Query 34540 AGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGC 34599
| |||| ||||||| ||||||||||| || || || | | ||| ||||| || ||
Sbjct 98 AAGGTTCTTCCGTCTTCTAGTTGTTTACCAGCGAAAATAAGTCTCTGCTGGTCTGGTGGA 39
Query 34600 ACTCCCTCCTTGTCTGTGATCTTTTGTTT 34628
| || |||||||| ||||||||| ||
Sbjct 38 ATACCTTCCTTGTCCTGGATCTTTTGCTT 10
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 314727597729626
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |