Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pichia_20membranifaciens_20[genbank_20GCA_5F001950575.1_202016-12- 15] 522 sequences; 11,394,881 total letters Query= NC_028491.1 Length=98392 Score E Sequences producing significant alignments: (Bits) Value seq138 95.1 8e-15 seq468 84.2 1e-11 >seq138 Length=17849 Score = 95.1 bits (104), Expect = 8e-15 Identities = 166/242 (69%), Gaps = 10/242 (4%) Strand=Plus/Minus Query 34480 CCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAA 34539 || ||||| | | ||| ||||| || | || || ||||| ||||| || || || Sbjct 9727 CCACCTCTCAATCTCAAGACCAAGTGTAAGGTTGATTCTTTTTGGATGTTGTAGTCGGAC 9668 Query 34540 AGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGC 34599 | |||| | ||||| | ||| ||||||||||| || | | || ||||| || || Sbjct 9667 AAAGTTCTACCATCTTCTAATTGCTTACCGGCAAAAATAAGTCTTTGCTGGTCAGGTGGG 9608 Query 34600 ACTCCCTCCTTGTCTGTGATCTTTTGTT-----TTAACGATAAAATTGTGTCTTCGCTCT 34654 | || ||||| ||| ||||||||| | ||| ||||| ||||| | Sbjct 9607 ATACCTTCCTTATCTTGGATCTTTTGCTTGACATTATCGATA-----GTGTCAGAAGATT 9553 Query 34655 CCACTTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCATGTTGATTG 34714 | ||||||| ||| || || ||||| ||||| || || |||||||| ||||| |||| || Sbjct 9552 CGACTTCCAAGGTAATGGTCTTACCAGTTAAGGTCTTGACAAAAATTTGCATCTTGACTG 9493 Query 34715 TA 34716 || Sbjct 9492 TA 9491 >seq468 Length=160 Score = 84.2 bits (92), Expect = 1e-11 Identities = 108/149 (72%), Gaps = 0/149 (0%) Strand=Plus/Minus Query 34480 CCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAA 34539 || ||||| | | ||||||||| || | ||| |||||||| ||||| || || || Sbjct 158 CCACCTCTCAATCTCAACACCAAGTGCAAAGTCGATTCCTTTTGGATGTTGTAGTCAGAC 99 Query 34540 AGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGC 34599 | |||| ||||||| ||||||||||| || || || | | ||| ||||| || || Sbjct 98 AAGGTTCTTCCGTCTTCTAGTTGTTTACCAGCGAAAATAAGTCTCTGCTGGTCTGGTGGA 39 Query 34600 ACTCCCTCCTTGTCTGTGATCTTTTGTTT 34628 | || |||||||| ||||||||| || Sbjct 38 ATACCTTCCTTGTCCTGGATCTTTTGCTT 10 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 314727597729626