Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pichia_20membranifaciens_20[genbank_20GCA_5F001950575.1_202016-12- 15] 522 sequences; 11,394,881 total letters Query= NC_029132.1 Length=140122 Score E Sequences producing significant alignments: (Bits) Value seq175 187 2e-42 >seq175 Length=70746 Score = 187 bits (206), Expect = 2e-42 Identities = 400/596 (67%), Gaps = 19/596 (3%) Strand=Plus/Plus Query 6548 TCGATGTGGTTCAGGTAGATATGCGCATCCCCCA--ACGTATGCACCAGCTCCCCAGGAA 6605 |||| ||||||| || | || || || |||| |||| | || | ||| || || Sbjct 32023 TCGACGTGGTTCGAATACACGTGGGCGTCACCCATAACGTGTACA--AACTCTCCGGGCT 32080 Query 6606 CCAACCCCACGACATGAGCGATCATGTACGTGAGCAGAGCGTAACTAGCAATGTTGAACG 6665 ||| | ||||| ||||||||||| ||||||| ||||| || |||||||| | Sbjct 32081 CCATGTCTACGACCATTGCGATCATGTAGGTGAGCAAGGCGTAGGAGGCGATGTTGAAGG 32140 Query 6666 GCACCCCTAACCCCATGTCTCCCGATCGTTGATAGAGCTGGCAGGACAGCT--------C 6717 |||| || || |||||||| | |||| || || | ||||||| ||| | Sbjct 32141 GCACGCCCAAGCCCATGTCGCAGGATCTCTGGTACATCTGGCAGCTGAGCCGAGGCTTGC 32200 Query 6718 CCCATT-CGCGA------CGTAGAATTGGCAGAGGGTGTGGCACGGGGGGAGCGCCATCA 6770 || ||| || || ||||||| ||||||| |||||| || || | |||||| Sbjct 32201 CCGATTTCGGGAAGCTCACGTAGAACTGGCAGAACACGTGGCAGGGTGGCAAGGCCATCT 32260 Query 6771 GAGGGAGATCCTTCGGGTTCCACGCGCACATCACGATCCTTCTGTCATCAGGGTTCCGCT 6830 || || ||||||||||||| |||| | ||| |||||||||| || || || Sbjct 32261 CCTTGAACGCCGGCGGGTTCCACGCGGACATGATGATTCTTCTGTCATATGGATTTGTCT 32320 Query 6831 TCAAGGTGTCGATCACGTACTGCAGCTGGTCCGCTCCCTGTCCCGAATAGTCCGCTTCGC 6890 |||| |||| || | | || |||||||| ||||| || || ||||| || |||| Sbjct 32321 TCAACGTGTGTATGATGGACGCGAGCTGGTCGTAGCCCTGGCCAGAGTAGTCTGCGTCGC 32380 Query 6891 TCCCCCGATACTCCGCCCCAAAGTGTCTCCACTGGAACCCGTAGACCGGGCCCAAGTCGC 6950 || ||||| || |||||||||||||||||||| |||||||| || |||||||||| Sbjct 32381 AATCCTTGTACTCTGCTCCAAAGTGTCTCCACTGGAAGCCGTAGACGGGACCCAAGTCGC 32440 Query 6951 CCTCCTCCCGAGATGGGAACCCCCGCTTGTCCAGAAAGTCTCGAGACCCGTGAGCGTCCC 7010 |||| || || | || ||| | ||| || | || || || |||| | |||| Sbjct 32441 CCTCTCTGCGGGAGGTCAAGCCCAGGGAGTCGAGGTACTCCCGTGAGCCGTTGCCTTCCC 32500 Query 7011 AGATCTTCACCCCCCGGGACGAGAGCTCCTTGGTGTTCGTGGCCCCCCTCACGAACCACA 7070 |||| || || || | || ||| ||| | || || | || ||| ||||||| Sbjct 32501 AGATTTTGACGCCTTTTGCGGAAAGCAGCTTTGCGTCTGTCGAGCCGTGCACAAACCACA 32560 Query 7071 GCAGCTCCTCGACCACGCCCTTCCAGTACACACGTTTCGTCGTCAGCAGCGGAAAT 7126 | || || | || | ||||||| | | || || || |||| ||| || ||| Sbjct 32561 GGAGTTCGTGGAGGATGCCCTTCATGAAGACTTTCTTTGTGGTCAACAGAGGGAAT 32616 Score = 187 bits (206), Expect = 2e-42 Identities = 400/596 (67%), Gaps = 19/596 (3%) Strand=Plus/Minus Query 34219 ATTTCCGCTGCTGACGACGAAACGTGTGTACTGGAAGGGCGTGGTCGAGGAGCTGCTGTG 34278 ||| || ||| |||| || || || | | ||||||| | || | || || ||||| Sbjct 32616 ATTCCCTCTGTTGACCACAAAGAAAGTCTTCATGAAGGGCATCCTCCACGAACTCCTGTG 32557 Query 34279 GTTCGTGAGGGGGGCCACGAACACCAAGGAGCTCTCGTCCCGGGGGGTGAAGATCTGGGA 34338 ||| ||| || | || || | ||| ||| || | || || || |||||||| Sbjct 32556 GTTTGTGCACGGCTCGACAGACGCAAAGCTGCTTTCCGCAAAAGGCGTCAAAATCTGGGA 32497 Query 34339 CGCTCACGGGTCTCGAGACTTTCTGGACAAGCGGGGGTTCCCATCTCGGGAGGAGGGCGA 34398 | |||| || || || | || ||| | ||| || | || || |||||||| Sbjct 32496 AGGCAACGGCTCACGGGAGTACCTCGACTCCCTGGGCTTGACCTCCCGCAGAGAGGGCGA 32437 Query 34399 CTTGGGCCCGGTCTACGGGTTCCAGTGGAGACACTTTGGGGCGGAGTATCGGGGGAGCGA 34458 |||||| || |||||||| |||||||||||||||||||| || ||||| || |||| Sbjct 32436 CTTGGGTCCCGTCTACGGCTTCCAGTGGAGACACTTTGGAGCAGAGTACAAGGATTGCGA 32377 Query 34459 AGCGGACTATTCGGGACAGGGAGCGGACCAGCTGCAGTACGTGATCGACACCTTGAAGCG 34518 || ||||| || || ||||| |||||||| || | | || |||| |||||| Sbjct 32376 CGCAGACTACTCTGGCCAGGGCTACGACCAGCTCGCGTCCATCATACACACGTTGAAGAC 32317 Query 34519 GAACCCTGATGACAGAAGGATCGTGATGTGCGCGTGGAACCCGAAGGATCTCCCTCTGAT 34578 || || |||||||||| ||| | |||| ||||||||||||| || || ||| Sbjct 32316 AAATCCATATGACAGAAGAATCATCATGTCCGCGTGGAACCCGCCGGCGTTCAAGGAGAT 32257 Query 34579 GGCGCTCCCCCCGTGCCACACCCTCTGCCAATTCTACG------TCGCG-AATGGGG--- 34628 ||| | || || |||||| ||||||| ||||||| || || ||| ||| Sbjct 32256 GGCCTTGCCACCCTGCCACGTGTTCTGCCAGTTCTACGTGAGCTTCCCGAAATCGGGCAA 32197 Query 34629 -----AGCTGTCCTGCCAGCTCTATCAACGATCGGGAGACATGGGGTTAGGGGTGCCGTT 34683 ||| ||||||| | || || |||| | |||||||| || || ||||| || Sbjct 32196 GCCTCGGCTCAGCTGCCAGATGTACCAGAGATCCTGCGACATGGGCTTGGGCGTGCCCTT 32137 Query 34684 CAACATTGCTAGTTACGCTCTGCTCACGTACATGATCGCTCATGTCGTGGGGTTGGTTCC 34743 |||||| || ||||| ||||||| ||||||||||| ||||| | ||| || Sbjct 32136 CAACATCGCCTCCTACGCCTTGCTCACCTACATGATCGCAATGGTCGTAGACATGGAGCC 32077 Query 34744 TGGGGAGCTGGTGCATACGT--TGGGGGATGCGCATATCTACCTGAACCACATCGA 34797 || ||| | || | |||| |||| || || || | || ||||||| |||| Sbjct 32076 CGGAGAGTT--TGTACACGTTATGGGTGACGCCCACGTGTATTCGAACCACGTCGA 32023 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 448259475087840