Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pichia_20membranifaciens_20[genbank_20GCA_5F001950575.1_202016-12-
15] 522 sequences; 11,394,881 total letters
Query= NC_029692.1
Length=362276
Score E
Sequences producing significant alignments: (Bits) Value
seq97 145 2e-29
seq138 129 1e-24
seq468 109 1e-18
seq6 100 7e-16
seq144 93.3 1e-13
>seq97
Length=66064
Score = 145 bits (160), Expect = 2e-29
Identities = 164/220 (75%), Gaps = 0/220 (0%)
Strand=Plus/Minus
Query 210899 TCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCC 210958
||||| ||| | ||| | |||||| || ||||||||||| || || | | || || ||
Sbjct 5461 TCTTAAGACCAAGTGCAAAGTGGATTCCTTTTGGATGTTGTAGTCGGATAAAGTTCTACC 5402
Query 210959 ATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTT 211018
|||||||| ||||| || |||||||| | | ||| |||||||| |||| ||||||||
Sbjct 5401 ATCTTCCAATTGCTTACCAGCGAAGATCAATCTTTGCTGGTCAGGTGGAATACCTTCCTT 5342
Query 211019 GTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGAT 211078
||| ||||| ||||| || || || || || ||||| || |||||||| || || ||
Sbjct 5341 GTCTTGGATTTTTTGCTTGACATTGTCAATAGTGTCGGAAGACTCAACCTCAAGGGTAAT 5282
Query 211079 CGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCATTTTA 211118
||||| || || || || || || || | ||||| |||
Sbjct 5281 AGTCTTACCGGTAAGGGTTTTGACGAAAATTTGCATCTTA 5242
>seq138
Length=17849
Score = 129 bits (142), Expect = 1e-24
Identities = 160/219 (73%), Gaps = 0/219 (0%)
Strand=Plus/Minus
Query 210899 TCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCC 210958
||| | ||| | ||| | || || |||||||||||||| || || | | || || ||
Sbjct 9716 TCTCAAGACCAAGTGTAAGGTTGATTCTTTTTGGATGTTGTAGTCGGACAAAGTTCTACC 9657
Query 210959 ATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTT 211018
|||||| | ||||| || || || ||||| | ||| |||||||| || | ||||||||
Sbjct 9656 ATCTTCTAATTGCTTACCGGCAAAAATAAGTCTTTGCTGGTCAGGTGGGATACCTTCCTT 9597
Query 211019 GTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGAT 211078
|| ||||||||||| || || || ||||| |||||||| ||| || || | || ||
Sbjct 9596 ATCTTGGATCTTTTGCTTGACATTATCGATAGTGTCAGAAGATTCGACTTCCAAGGTAAT 9537
Query 211079 CGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCATTTT 211117
||||| || || | ||||| ||||| | ||||| ||
Sbjct 9536 GGTCTTACCAGTTAAGGTCTTGACAAAAATTTGCATCTT 9498
>seq468
Length=160
Score = 109 bits (120), Expect = 1e-18
Identities = 105/135 (78%), Gaps = 0/135 (0%)
Strand=Plus/Minus
Query 210911 GTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTCCAGCTG 210970
||| | ||| || || ||||||||||| || || | | ||| ||||| ||||| || ||
Sbjct 135 GTGCAAAGTCGATTCCTTTTGGATGTTGTAGTCAGACAAGGTTCTTCCGTCTTCTAGTTG 76
Query 210971 CTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGATCTT 211030
|| || ||||| ||||| | || ||||| || |||| ||||||||||||||||||||
Sbjct 75 TTTACCAGCGAAAATAAGTCTCTGCTGGTCTGGTGGAATACCTTCCTTGTCCTGGATCTT 16
Query 211031 TTGTTTCACGTTTTC 211045
||| || ||||| ||
Sbjct 15 TTGCTTGACGTTATC 1
>seq6
Length=31370
Score = 100 bits (110), Expect = 7e-16
Identities = 360/557 (65%), Gaps = 16/557 (3%)
Strand=Plus/Plus
Query 139432 ATGTTGACCAACGAACATGGTACAGCCTCAAACATTAAGTCGCGAGTCAACAGGCTTTCT 139491
|||||||| | ||| | ||||| || ||||||||||| || |||| ||||| ||||||
Sbjct 5295 ATGTTGACGGATGAATACGGTACCGCTTCAAACATTAAATCCAGAGTTAACAGACTTTCT 5354
Query 139492 GTTCTTGGGGCGATCGTCTCTTGCCAGCAAAAGTTAAAACTTTTACGGGACGTCCCAAAG 139551
|||||| || ||| ||| || || || ||||| |||| |||| || ||
Sbjct 5355 GTTCTTTCTGCCATCACCTCCACGCAACAGAAATTAAAGCTTTACACAAACGTTCCTAAA 5414
Query 139552 AACGGACTTGTAATTTTTAGCGG--AAGTGTTATGCTTCCCGAAGGCAAGGAGAAAAAGG 139609
||||| || || ||| | | || ||||||| | ||||| ||||| || ||
Sbjct 5415 AACGGTCTGGTTGTTTATTGTGGTGAAGTGTT--GACAGATGAAGGTAAGGAAAAGAAAT 5472
Query 139610 TTGCATTCGACATTGAACCTTTCCGTCCAATCAGCCAGAAAGTTTACGCATGCGACAGTG 139669
| | ||| | | ||||||||| ||||||| |||| || ||||
Sbjct 5473 TGACCATCGCCTTCGAACCTTTCAAACCAATCAATACCTCTCTTTATTTGTGTGACAACA 5532
Query 139670 TTTTCCATACGGA----TTGTCTGAAAGATCTGTTGTAT--GATGACCAATCTTATGGTT 139723
|||||| || |||||||| | | | | | || ||||| || | ||||
Sbjct 5533 AATTCCATGTTGAGGCGTTGTCTGA--GTTGT-TAGAATCCGATGATAGATTT---GGTT 5586
Query 139724 TTATTATCGTGGATGGCTCCGGTGTTTTATTTGCGACTCTTTCAGGAAGTACAAGAACAA 139783
||||| || |||| || |||| | | || | | | || || | || ||| ||
Sbjct 5587 TTATTGTCATGGACGGTAATGGTGCTCTTTTCGGTGCATTATCCGGTAACACGAGAGAAA 5646
Query 139784 CAATCTCGAGTTTCCAAGTTTGCCTTCCAAAGAAGCACGGAAGAGGAGGACAATCTGCTC 139843
|| | ||| |||| | || |||||||| || ||||| || || |||||||
Sbjct 5647 TCCTCCACAAATTCACAGTTGATTTACCCAAGAAGCATGGTAGAGGTGGTCAGTCTGCTC 5706
Query 139844 TGCGTTTTGAAAGACTTCGAAAGGAAAAGAGGCACAACTACTTGAGAAAAGTTGCAGAGA 139903
| ||||||| |||| | || | |||||||| || ||||| | |||||||| || ||
Sbjct 5707 TTCGTTTTGCAAGATTGAGAGATGAAAAGAGACATAACTATATTAGAAAAGTCGCTGAAG 5766
Query 139904 ACGCAATACAGTGTTTTATCAAAGACAACAAGTGTTTTGTTTCTGGTATTGTTTTGGCAG 139963
|| | || |||||||| || | ||| |||| ||| | |||||||||
Sbjct 5767 TTGCCGTTCAAAATTTTATCACCAACGATAAGGTGAATGTTCAAGGTTTGATTTTGGCAG 5826
Query 139964 GTTCCGCAGAGTTCAAG 139980
|||| || || ||||||
Sbjct 5827 GTTCTGCCGATTTCAAG 5843
>seq144
Length=18003
Score = 93.3 bits (102), Expect = 1e-13
Identities = 92/119 (77%), Gaps = 0/119 (0%)
Strand=Plus/Plus
Query 211002 GGAGGAACTCCTTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTT 211061
|| |||| ||||||||||||||||||||||| || ||||| ||||| ||||| |||
Sbjct 2 GGTGGAATACCTTCCTTGTCCTGGATCTTTTGCTTGACGTTATCGATCGTGTCTGAGGAC 61
Query 211062 TCAACCTCGAGAGTGATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCATTTTATG 211120
|||||||| || || || ||||| || || | ||||| || || | ||||| || ||
Sbjct 62 TCAACCTCAAGGGTAATAGTCTTACCGGTCAATGTCTTAACGAAAATTTGCATCTTCTG 120
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1159144247446530
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |