Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pichia_20membranifaciens_20[genbank_20GCA_5F001950575.1_202016-12- 15] 522 sequences; 11,394,881 total letters Query= NC_029692.1 Length=362276 Score E Sequences producing significant alignments: (Bits) Value seq97 145 2e-29 seq138 129 1e-24 seq468 109 1e-18 seq6 100 7e-16 seq144 93.3 1e-13 >seq97 Length=66064 Score = 145 bits (160), Expect = 2e-29 Identities = 164/220 (75%), Gaps = 0/220 (0%) Strand=Plus/Minus Query 210899 TCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCC 210958 ||||| ||| | ||| | |||||| || ||||||||||| || || | | || || || Sbjct 5461 TCTTAAGACCAAGTGCAAAGTGGATTCCTTTTGGATGTTGTAGTCGGATAAAGTTCTACC 5402 Query 210959 ATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTT 211018 |||||||| ||||| || |||||||| | | ||| |||||||| |||| |||||||| Sbjct 5401 ATCTTCCAATTGCTTACCAGCGAAGATCAATCTTTGCTGGTCAGGTGGAATACCTTCCTT 5342 Query 211019 GTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGAT 211078 ||| ||||| ||||| || || || || || ||||| || |||||||| || || || Sbjct 5341 GTCTTGGATTTTTTGCTTGACATTGTCAATAGTGTCGGAAGACTCAACCTCAAGGGTAAT 5282 Query 211079 CGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCATTTTA 211118 ||||| || || || || || || || | ||||| ||| Sbjct 5281 AGTCTTACCGGTAAGGGTTTTGACGAAAATTTGCATCTTA 5242 >seq138 Length=17849 Score = 129 bits (142), Expect = 1e-24 Identities = 160/219 (73%), Gaps = 0/219 (0%) Strand=Plus/Minus Query 210899 TCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCC 210958 ||| | ||| | ||| | || || |||||||||||||| || || | | || || || Sbjct 9716 TCTCAAGACCAAGTGTAAGGTTGATTCTTTTTGGATGTTGTAGTCGGACAAAGTTCTACC 9657 Query 210959 ATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTT 211018 |||||| | ||||| || || || ||||| | ||| |||||||| || | |||||||| Sbjct 9656 ATCTTCTAATTGCTTACCGGCAAAAATAAGTCTTTGCTGGTCAGGTGGGATACCTTCCTT 9597 Query 211019 GTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGAT 211078 || ||||||||||| || || || ||||| |||||||| ||| || || | || || Sbjct 9596 ATCTTGGATCTTTTGCTTGACATTATCGATAGTGTCAGAAGATTCGACTTCCAAGGTAAT 9537 Query 211079 CGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCATTTT 211117 ||||| || || | ||||| ||||| | ||||| || Sbjct 9536 GGTCTTACCAGTTAAGGTCTTGACAAAAATTTGCATCTT 9498 >seq468 Length=160 Score = 109 bits (120), Expect = 1e-18 Identities = 105/135 (78%), Gaps = 0/135 (0%) Strand=Plus/Minus Query 210911 GTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTCCAGCTG 210970 ||| | ||| || || ||||||||||| || || | | ||| ||||| ||||| || || Sbjct 135 GTGCAAAGTCGATTCCTTTTGGATGTTGTAGTCAGACAAGGTTCTTCCGTCTTCTAGTTG 76 Query 210971 CTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGATCTT 211030 || || ||||| ||||| | || ||||| || |||| |||||||||||||||||||| Sbjct 75 TTTACCAGCGAAAATAAGTCTCTGCTGGTCTGGTGGAATACCTTCCTTGTCCTGGATCTT 16 Query 211031 TTGTTTCACGTTTTC 211045 ||| || ||||| || Sbjct 15 TTGCTTGACGTTATC 1 >seq6 Length=31370 Score = 100 bits (110), Expect = 7e-16 Identities = 360/557 (65%), Gaps = 16/557 (3%) Strand=Plus/Plus Query 139432 ATGTTGACCAACGAACATGGTACAGCCTCAAACATTAAGTCGCGAGTCAACAGGCTTTCT 139491 |||||||| | ||| | ||||| || ||||||||||| || |||| ||||| |||||| Sbjct 5295 ATGTTGACGGATGAATACGGTACCGCTTCAAACATTAAATCCAGAGTTAACAGACTTTCT 5354 Query 139492 GTTCTTGGGGCGATCGTCTCTTGCCAGCAAAAGTTAAAACTTTTACGGGACGTCCCAAAG 139551 |||||| || ||| ||| || || || ||||| |||| |||| || || Sbjct 5355 GTTCTTTCTGCCATCACCTCCACGCAACAGAAATTAAAGCTTTACACAAACGTTCCTAAA 5414 Query 139552 AACGGACTTGTAATTTTTAGCGG--AAGTGTTATGCTTCCCGAAGGCAAGGAGAAAAAGG 139609 ||||| || || ||| | | || ||||||| | ||||| ||||| || || Sbjct 5415 AACGGTCTGGTTGTTTATTGTGGTGAAGTGTT--GACAGATGAAGGTAAGGAAAAGAAAT 5472 Query 139610 TTGCATTCGACATTGAACCTTTCCGTCCAATCAGCCAGAAAGTTTACGCATGCGACAGTG 139669 | | ||| | | ||||||||| ||||||| |||| || |||| Sbjct 5473 TGACCATCGCCTTCGAACCTTTCAAACCAATCAATACCTCTCTTTATTTGTGTGACAACA 5532 Query 139670 TTTTCCATACGGA----TTGTCTGAAAGATCTGTTGTAT--GATGACCAATCTTATGGTT 139723 |||||| || |||||||| | | | | | || ||||| || | |||| Sbjct 5533 AATTCCATGTTGAGGCGTTGTCTGA--GTTGT-TAGAATCCGATGATAGATTT---GGTT 5586 Query 139724 TTATTATCGTGGATGGCTCCGGTGTTTTATTTGCGACTCTTTCAGGAAGTACAAGAACAA 139783 ||||| || |||| || |||| | | || | | | || || | || ||| || Sbjct 5587 TTATTGTCATGGACGGTAATGGTGCTCTTTTCGGTGCATTATCCGGTAACACGAGAGAAA 5646 Query 139784 CAATCTCGAGTTTCCAAGTTTGCCTTCCAAAGAAGCACGGAAGAGGAGGACAATCTGCTC 139843 || | ||| |||| | || |||||||| || ||||| || || ||||||| Sbjct 5647 TCCTCCACAAATTCACAGTTGATTTACCCAAGAAGCATGGTAGAGGTGGTCAGTCTGCTC 5706 Query 139844 TGCGTTTTGAAAGACTTCGAAAGGAAAAGAGGCACAACTACTTGAGAAAAGTTGCAGAGA 139903 | ||||||| |||| | || | |||||||| || ||||| | |||||||| || || Sbjct 5707 TTCGTTTTGCAAGATTGAGAGATGAAAAGAGACATAACTATATTAGAAAAGTCGCTGAAG 5766 Query 139904 ACGCAATACAGTGTTTTATCAAAGACAACAAGTGTTTTGTTTCTGGTATTGTTTTGGCAG 139963 || | || |||||||| || | ||| |||| ||| | ||||||||| Sbjct 5767 TTGCCGTTCAAAATTTTATCACCAACGATAAGGTGAATGTTCAAGGTTTGATTTTGGCAG 5826 Query 139964 GTTCCGCAGAGTTCAAG 139980 |||| || || |||||| Sbjct 5827 GTTCTGCCGATTTCAAG 5843 >seq144 Length=18003 Score = 93.3 bits (102), Expect = 1e-13 Identities = 92/119 (77%), Gaps = 0/119 (0%) Strand=Plus/Plus Query 211002 GGAGGAACTCCTTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTT 211061 || |||| ||||||||||||||||||||||| || ||||| ||||| ||||| ||| Sbjct 2 GGTGGAATACCTTCCTTGTCCTGGATCTTTTGCTTGACGTTATCGATCGTGTCTGAGGAC 61 Query 211062 TCAACCTCGAGAGTGATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCATTTTATG 211120 |||||||| || || || ||||| || || | ||||| || || | ||||| || || Sbjct 62 TCAACCTCAAGGGTAATAGTCTTACCGGTCAATGTCTTAACGAAAATTTGCATCTTCTG 120 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1159144247446530