Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pichia_20membranifaciens_20[genbank_20GCA_5F001950575.1_202016-12-
15] 522 sequences; 11,394,881 total letters
Query= NC_030230.1
Length=372707
Score E
Sequences producing significant alignments: (Bits) Value
seq138 174 4e-38
seq97 167 6e-36
seq468 132 1e-25
seq98 100 7e-16
seq144 93.3 1e-13
>seq138
Length=17849
Score = 174 bits (192), Expect = 4e-38
Identities = 170/219 (78%), Gaps = 0/219 (0%)
Strand=Plus/Minus
Query 225498 TCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCC 225557
||||| ||| | ||| | || ||||||||||||| ||||| |||| ||||||||| ||
Sbjct 9716 TCTCAAGACCAAGTGTAAGGTTGATTCTTTTTGGATGTTGTAGTCGGACAAAGTTCTACC 9657
Query 225558 ATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTT 225617
|||||||| ||||| || || || ||||||| ||| ||||| || || |||||||||||
Sbjct 9656 ATCTTCTAATTGCTTACCGGCAAAAATAAGTCTTTGCTGGTCAGGTGGGATACCTTCCTT 9597
Query 225618 GTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGAT 225677
||||||||||||||||| ||| ||||| ||||| || | ||| || || || || ||
Sbjct 9596 ATCTTGGATCTTTTGCTTGACATTATCGATAGTGTCAGAAGATTCGACTTCCAAGGTAAT 9537
Query 225678 CGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCATTTT 225716
||||| || || || || || | || | |||||| ||
Sbjct 9536 GGTCTTACCAGTTAAGGTCTTGACAAAAATTTGCATCTT 9498
>seq97
Length=66064
Score = 167 bits (184), Expect = 6e-36
Identities = 169/220 (77%), Gaps = 0/220 (0%)
Strand=Plus/Minus
Query 225498 TCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCC 225557
||| | ||| | ||| | ||||||||| ||||||| ||||| |||| |||||||| ||
Sbjct 5461 TCTTAAGACCAAGTGCAAAGTGGATTCCTTTTGGATGTTGTAGTCGGATAAAGTTCTACC 5402
Query 225558 ATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTT 225617
|||||| | ||||| ||||||||||| | || ||| ||||| || ||||||||||||||
Sbjct 5401 ATCTTCCAATTGCTTACCAGCGAAGATCAATCTTTGCTGGTCAGGTGGAATACCTTCCTT 5342
Query 225618 GTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGAT 225677
||||||||| |||||||| ||| || || ||||| || | || || || | || ||
Sbjct 5341 GTCTTGGATTTTTTGCTTGACATTGTCAATAGTGTCGGAAGACTCAACCTCAAGGGTAAT 5282
Query 225678 CGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCATTTTA 225717
||||| || || | ||||| | ||| | |||||| |||
Sbjct 5281 AGTCTTACCGGTAAGGGTTTTGACGAAAATTTGCATCTTA 5242
>seq468
Length=160
Score = 132 bits (146), Expect = 1e-25
Identities = 114/141 (81%), Gaps = 0/141 (0%)
Strand=Plus/Minus
Query 225498 TCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCC 225557
||||| || | ||| | ||| ||||| ||||||| ||||| || | ||| ||||| ||
Sbjct 147 TCTCAACACCAAGTGCAAAGTCGATTCCTTTTGGATGTTGTAGTCAGACAAGGTTCTTCC 88
Query 225558 ATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTT 225617
|||||||| || || |||||||| ||||||| || ||||| || ||||||||||||||
Sbjct 87 GTCTTCTAGTTGTTTACCAGCGAAAATAAGTCTCTGCTGGTCTGGTGGAATACCTTCCTT 28
Query 225618 GTCTTGGATCTTTTGCTTCAC 225638
||| |||||||||||||| ||
Sbjct 27 GTCCTGGATCTTTTGCTTGAC 7
>seq98
Length=37413
Score = 100 bits (110), Expect = 7e-16
Identities = 85/105 (81%), Gaps = 0/105 (0%)
Strand=Plus/Plus
Query 4470 GAATATTTGACCATCAGTAATAGAGATAACATTTGTAGGGATATAAGCAGAAACATCACC 4529
||| ||||||||||| ||||| || |||||||| || || ||||||||||||||||||||
Sbjct 19168 GAAAATTTGACCATCGGTAATGGAAATAACATTGGTTGGAATATAAGCAGAAACATCACC 19227
Query 4530 TGCTTGTGTTTCGACAACAGGTAAGGCTGTTAGTGATCCACCACC 4574
|||| ||||| | || ||||| || || | || ||||||||
Sbjct 19228 ACCTTGGGTTTCAATGACTGGTAAAGCAGTCAAAGAACCACCACC 19272
>seq144
Length=18003
Score = 93.3 bits (102), Expect = 1e-13
Identities = 92/119 (77%), Gaps = 0/119 (0%)
Strand=Plus/Plus
Query 225601 GGCGGAATACCTTCCTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTT 225660
|| ||||||||||||||||| |||||||||||||| || ||||| ||||||||||
Sbjct 2 GGTGGAATACCTTCCTTGTCCTGGATCTTTTGCTTGACGTTATCGATCGTGTCTGAGGAC 61
Query 225661 TCCACGTCTAACGTGATCGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCATTTTATG 225719
|| || || | || || ||||| || ||||| || || | ||| | |||||| || ||
Sbjct 62 TCAACCTCAAGGGTAATAGTCTTACCGGTCAATGTCTTAACGAAAATTTGCATCTTCTG 120
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1192523224202268
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |