Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pichia_20membranifaciens_20[genbank_20GCA_5F001950575.1_202016-12- 15] 522 sequences; 11,394,881 total letters Query= NC_030240.1 Length=128058 Score E Sequences producing significant alignments: (Bits) Value seq97 113 4e-20 seq138 107 2e-18 >seq97 Length=66064 Score = 113 bits (124), Expect = 4e-20 Identities = 161/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 101012 CCGCCTCGCAATCTTAACACCATGTGCAAAGTTGATTCTTTTTGAATATTGTAATCGGCC 101071 || |||| ||||||||| |||| ||||||||| ||||| ||||| || ||||| |||| Sbjct 5472 CCACCTCTCAATCTTAAGACCAAGTGCAAAGTGGATTCCTTTTGGATGTTGTAGTCGGAT 5413 Query 101072 ATAGTTTTGGAATCTTCCAATTGTTTGCCCGCATATATAAGCCTTTGTTGGTCTACGGGC 101131 | |||| | |||||||||||| || || || | || | ||||| ||||| || Sbjct 5412 AAAGTTCTACCATCTTCCAATTGCTTACCAGCGAAGATCAATCTTTGCTGGTCAGGTGGA 5353 Query 101132 ACGCCTTCTTTGTCGGCAATTTTTTGTTTCACATCGGCCACCGTCTCTGTGGACGTTGTT 101191 | ||||| ||||| |||||||| || |||| | | | || || | ||| Sbjct 5352 ATACCTTCCTTGTCTTGGATTTTTTGCTTGACATTGTCAATAGTGTCGGAAGACTCAACC 5293 Query 101192 TCGACGGTAATAGTTTTGCCCGTCAATGTTTTAATAAAAATTTGCAT 101238 || | ||||||||| || || || | ||||| | ||||||||||| Sbjct 5292 TCAAGGGTAATAGTCTTACCGGTAAGGGTTTTGACGAAAATTTGCAT 5246 >seq138 Length=17849 Score = 107 bits (118), Expect = 2e-18 Identities = 160/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 101012 CCGCCTCGCAATCTTAACACCATGTGCAAAGTTGATTCTTTTTGAATATTGTAATCGGCC 101071 || |||| |||||| || |||| ||| || |||||||||||||| || ||||| |||| | Sbjct 9727 CCACCTCTCAATCTCAAGACCAAGTGTAAGGTTGATTCTTTTTGGATGTTGTAGTCGGAC 9668 Query 101072 ATAGTTTTGGAATCTTCCAATTGTTTGCCCGCATATATAAGCCTTTGTTGGTCTACGGGC 101131 | |||| | |||||| ||||| || || ||| | ||||| ||||| ||||| || Sbjct 9667 AAAGTTCTACCATCTTCTAATTGCTTACCGGCAAAAATAAGTCTTTGCTGGTCAGGTGGG 9608 Query 101132 ACGCCTTCTTTGTCGGCAATTTTTTGTTTCACATCGGCCACCGTCTCTGTGGACGTTGTT 101191 | ||||| || || || ||||| || |||| | | || || | || | Sbjct 9607 ATACCTTCCTTATCTTGGATCTTTTGCTTGACATTATCGATAGTGTCAGAAGATTCGACT 9548 Query 101192 TCGACGGTAATAGTTTTGCCCGTCAATGTTTTAATAAAAATTTGCAT 101238 || | |||||| || || || || || || || | |||||||||||| Sbjct 9547 TCCAAGGTAATGGTCTTACCAGTTAAGGTCTTGACAAAAATTTGCAT 9501 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 409658193789198