Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pichia_20membranifaciens_20[genbank_20GCA_5F001950575.1_202016-12- 15] 522 sequences; 11,394,881 total letters Query= NC_030656.1 Length=133492 Score E Sequences producing significant alignments: (Bits) Value seq183 154 1e-32 >seq183 Length=27355 Score = 154 bits (170), Expect = 1e-32 Identities = 565/875 (65%), Gaps = 21/875 (2%) Strand=Plus/Minus Query 4257 TTTTGGTATTCGGATACTCGCTTTTCGAAGAAATTAGTTTTGCCTTCTAACGAAATATTT 4316 || || || ||||| || ||||| |||||||| || |||||||| | | |||||| || Sbjct 26802 TTCTGATAGTCGGAGACCCGCTTCTCGAAGAAGTTGGTTTTGCCGGCAAGCGAAATGTTC 26743 Query 4317 TCCATAAAATCAAACGGATTAGTTGCGTTGTAATGTTTTTCACACTTTAGAGCTACAAGC 4376 ||||| ||||| || || || || ||||||| || || || || || || |||| | Sbjct 26742 TCCATGAAATCGAATGGGTTGGTGACGTTGTAGTGCTTGTCGCAGCCGAGGGCGACAAAC 26683 Query 4377 AATCGGTCAGCTACAAATTCTATATACTGGCTCATGAGTTCGCAGTTAATTCCAATTAAT 4436 || ||||| || ||||| || | ||||||| ||| | || ||| || || | || Sbjct 26682 AAGCGGTCGGCGACAAACTCGACGTACTGGCACATCAAGTCCTTGTTCATGCCCAACAAG 26623 Query 4437 CTCACAGGTAGCGCGTATGTCAAAAA-CTCTTGTTCTATAGTTACGGCTTCTGTGATTAT 4495 | || || | |||| || || | | ||| | | ||| ||||| || ||||| || Sbjct 26622 TTGACGGGCAAGGCGTCAGTGAAGTAGCGCTTCT-CGATATCAACGGCCTCGGTGATGAT 26564 Query 4496 ATCTTTT-----ATTTTATCTTTAGATGGTTTATTTACTAAGTATCCAAACAATAAACAC 4550 ||| || | || | | | ||||| | || ||||| || || Sbjct 26563 --CTTGCGGACAATCGTCTCGTCCGGGGTGTTATTCAG---GTGCGAGAACAACAAGCAG 26509 Query 4551 GCAAAATCACAATGCAAACCTTCGTCTCTGCTAATCAGTTCGTTAGAAAACGTTAATCCG 4610 ||||| || ||||| || ||||| | | |||| ||||| || ||||| || ||| Sbjct 26508 GCAAAGTCGGTGTGCAAGCCCTCGTCCCGACAGATCAACTCGTTCGAGAACGTCAAGCCG 26449 Query 4611 GGCATTAAACCTCTCTTTTTAAGCCAAAATATAGCGGCAAATGACCCAGAAAAGAATATG 4670 ||||| | || | ||| || | ||| || || | ||||| || || || ||||| || Sbjct 26448 GGCATGAGCCCCCGCTTCTTCAACCAGAAGATCGACGCAAACGAGCCCGAGAAGAAAATC 26389 Query 4671 CCTTCTACGGCGGCAAACGCTACTAATCGGGACCCGAACGAGCTGGCTTTGTCTTTAATC 4730 || || |||||||||||||| || || || || ||| | | ||||| || ||| Sbjct 26388 CCCTCCACGGCGGCAAACGCCACCAAGCGCTCGCCAAACAACGCATCCTTGTCGTTGATC 26329 Query 4731 CATTTTAATGCCCAGTTAGCTTTTTTCTTAACGCACGGAATTGTGTATATAGCGTTAAAT 4790 ||| | | ||||| | || || | ||| | |||||| || | | || ||||| || Sbjct 26328 CATCTGAGCGCCCACTCGGCCTTCTCCTTGATGCACGGGATGTTATCGATCGCGTTGAA- 26270 Query 4791 AATTTACT-TTTTTCAAATGGGTCTTGAATATAAGTGTCTATTAGTAGGCTATACATTTC 4849 | |||| || || || || | | || ||||| || | | ||| | || Sbjct 26269 GAGGTACTCGTTCTCCTTCGGATCCTTCACGTACGTGTCGATCAACAACGAGTACGTCTC 26210 Query 4850 AGAATGTATATTTTCTATAGCAATCTGAAATCCGTAAAAGCATCTAGCTTCTGTTACTTG 4909 || || || || || || ||||| || ||||| || || | || || | || || Sbjct 26209 CGAGTGGATGTTCTCCATCATGATCTGGAAACCGTAGAAACACTTTGCCTCCGGCACCTG 26150 Query 4910 AACTTCGTTACAAAATCTTTCTACTAAGTTTTCGTTTACTATACCGTCACTGGCTGCAAA 4969 || || | || | || || ||||| ||||| || || ||||| || ||||| Sbjct 26149 CACCTCTGCGGAGAAGTTCTCCACCAAGTTCTCGTTCACAATCCCGTCCGAAGCGGCAAA 26090 Query 4970 AAACGCCAAAACATGAGATATAAAGTA---CTGTTCGTCAGGCTTAAGTTTT--TTCCAG 5024 |||||||| || || || ||||| || | ||| | | || | | |||||| Sbjct 26089 GAACGCCAACACTCTCGAGATGAAGTATCTCTCGTTGTC--GTTCAACCTCTCGTTCCAG 26032 Query 5025 TGGGGCAAATCTTTAGTTAAATCAACTTCTTCAACAGTCCAAAACGACGCTTCCGCTTTT 5084 | | ||| || || | | ||| | || || | |||||||| || || || || || Sbjct 26031 TCGTGCAGGTCCTTTGAGAGATCGATCTCCTCGGCGGTCCAAAAAGAGGCCTCTGCCTTC 25972 Query 5085 TTGTACATAGACCAAATATCAGGATACTGAATCGG 5119 |||||||| ||| || || | |||| ||||| Sbjct 25971 TTGTACATCTGCCATATCTCGTGGTACTTGATCGG 25937 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 427046883163826