Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pichia_20membranifaciens_20[genbank_20GCA_5F001950575.1_202016-12-
15] 522 sequences; 11,394,881 total letters
Query= NC_030656.1
Length=133492
Score E
Sequences producing significant alignments: (Bits) Value
seq183 154 1e-32
>seq183
Length=27355
Score = 154 bits (170), Expect = 1e-32
Identities = 565/875 (65%), Gaps = 21/875 (2%)
Strand=Plus/Minus
Query 4257 TTTTGGTATTCGGATACTCGCTTTTCGAAGAAATTAGTTTTGCCTTCTAACGAAATATTT 4316
|| || || ||||| || ||||| |||||||| || |||||||| | | |||||| ||
Sbjct 26802 TTCTGATAGTCGGAGACCCGCTTCTCGAAGAAGTTGGTTTTGCCGGCAAGCGAAATGTTC 26743
Query 4317 TCCATAAAATCAAACGGATTAGTTGCGTTGTAATGTTTTTCACACTTTAGAGCTACAAGC 4376
||||| ||||| || || || || ||||||| || || || || || || |||| |
Sbjct 26742 TCCATGAAATCGAATGGGTTGGTGACGTTGTAGTGCTTGTCGCAGCCGAGGGCGACAAAC 26683
Query 4377 AATCGGTCAGCTACAAATTCTATATACTGGCTCATGAGTTCGCAGTTAATTCCAATTAAT 4436
|| ||||| || ||||| || | ||||||| ||| | || ||| || || | ||
Sbjct 26682 AAGCGGTCGGCGACAAACTCGACGTACTGGCACATCAAGTCCTTGTTCATGCCCAACAAG 26623
Query 4437 CTCACAGGTAGCGCGTATGTCAAAAA-CTCTTGTTCTATAGTTACGGCTTCTGTGATTAT 4495
| || || | |||| || || | | ||| | | ||| ||||| || ||||| ||
Sbjct 26622 TTGACGGGCAAGGCGTCAGTGAAGTAGCGCTTCT-CGATATCAACGGCCTCGGTGATGAT 26564
Query 4496 ATCTTTT-----ATTTTATCTTTAGATGGTTTATTTACTAAGTATCCAAACAATAAACAC 4550
||| || | || | | | ||||| | || ||||| || ||
Sbjct 26563 --CTTGCGGACAATCGTCTCGTCCGGGGTGTTATTCAG---GTGCGAGAACAACAAGCAG 26509
Query 4551 GCAAAATCACAATGCAAACCTTCGTCTCTGCTAATCAGTTCGTTAGAAAACGTTAATCCG 4610
||||| || ||||| || ||||| | | |||| ||||| || ||||| || |||
Sbjct 26508 GCAAAGTCGGTGTGCAAGCCCTCGTCCCGACAGATCAACTCGTTCGAGAACGTCAAGCCG 26449
Query 4611 GGCATTAAACCTCTCTTTTTAAGCCAAAATATAGCGGCAAATGACCCAGAAAAGAATATG 4670
||||| | || | ||| || | ||| || || | ||||| || || || ||||| ||
Sbjct 26448 GGCATGAGCCCCCGCTTCTTCAACCAGAAGATCGACGCAAACGAGCCCGAGAAGAAAATC 26389
Query 4671 CCTTCTACGGCGGCAAACGCTACTAATCGGGACCCGAACGAGCTGGCTTTGTCTTTAATC 4730
|| || |||||||||||||| || || || || ||| | | ||||| || |||
Sbjct 26388 CCCTCCACGGCGGCAAACGCCACCAAGCGCTCGCCAAACAACGCATCCTTGTCGTTGATC 26329
Query 4731 CATTTTAATGCCCAGTTAGCTTTTTTCTTAACGCACGGAATTGTGTATATAGCGTTAAAT 4790
||| | | ||||| | || || | ||| | |||||| || | | || ||||| ||
Sbjct 26328 CATCTGAGCGCCCACTCGGCCTTCTCCTTGATGCACGGGATGTTATCGATCGCGTTGAA- 26270
Query 4791 AATTTACT-TTTTTCAAATGGGTCTTGAATATAAGTGTCTATTAGTAGGCTATACATTTC 4849
| |||| || || || || | | || ||||| || | | ||| | ||
Sbjct 26269 GAGGTACTCGTTCTCCTTCGGATCCTTCACGTACGTGTCGATCAACAACGAGTACGTCTC 26210
Query 4850 AGAATGTATATTTTCTATAGCAATCTGAAATCCGTAAAAGCATCTAGCTTCTGTTACTTG 4909
|| || || || || || ||||| || ||||| || || | || || | || ||
Sbjct 26209 CGAGTGGATGTTCTCCATCATGATCTGGAAACCGTAGAAACACTTTGCCTCCGGCACCTG 26150
Query 4910 AACTTCGTTACAAAATCTTTCTACTAAGTTTTCGTTTACTATACCGTCACTGGCTGCAAA 4969
|| || | || | || || ||||| ||||| || || ||||| || |||||
Sbjct 26149 CACCTCTGCGGAGAAGTTCTCCACCAAGTTCTCGTTCACAATCCCGTCCGAAGCGGCAAA 26090
Query 4970 AAACGCCAAAACATGAGATATAAAGTA---CTGTTCGTCAGGCTTAAGTTTT--TTCCAG 5024
|||||||| || || || ||||| || | ||| | | || | | ||||||
Sbjct 26089 GAACGCCAACACTCTCGAGATGAAGTATCTCTCGTTGTC--GTTCAACCTCTCGTTCCAG 26032
Query 5025 TGGGGCAAATCTTTAGTTAAATCAACTTCTTCAACAGTCCAAAACGACGCTTCCGCTTTT 5084
| | ||| || || | | ||| | || || | |||||||| || || || || ||
Sbjct 26031 TCGTGCAGGTCCTTTGAGAGATCGATCTCCTCGGCGGTCCAAAAAGAGGCCTCTGCCTTC 25972
Query 5085 TTGTACATAGACCAAATATCAGGATACTGAATCGG 5119
|||||||| ||| || || | |||| |||||
Sbjct 25971 TTGTACATCTGCCATATCTCGTGGTACTTGATCGG 25937
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 427046883163826
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |