Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pichia_20membranifaciens_20[genbank_20GCA_5F001950575.1_202016-12- 15] 522 sequences; 11,394,881 total letters Query= NC_030842.1 Length=115510 Score E Sequences producing significant alignments: (Bits) Value seq175 123 2e-23 >seq175 Length=70746 Score = 123 bits (136), Expect = 2e-23 Identities = 455/704 (65%), Gaps = 29/704 (4%) Strand=Plus/Plus Query 27114 TCTGGGCTCCCTCTCGAGCTGAGTCTTCAGCGGTTCCACGTGATCCAGGTAGACGTGAGC 27173 ||||||| | |||| | ||| |||| | || ||||| | | || ||||| || Sbjct 31989 TCTGGGCACTCTCTGCAACTGCTCTTTCAAGGCGTCGACGTGGTTCGAATACACGTGGGC 32048 Query 27174 GTCTCCCAGGGTGTGGACAAACTCTCCCGGTTCTAGCCCGGTGACGTGAGCCATCATGTA 27233 ||| |||| ||| ||||||||||| || || | | ||| || |||||||| Sbjct 32049 GTCACCCATAACGTGTACAAACTCTCCGGGCTCCATGTCTACGACCATTGCGATCATGTA 32108 Query 27234 CGTGAGGAGAGAGTAGCTGGCGATGTTAAAGGGTACCCCGAGCCCCATGTCCCCCGACCT 27293 ||||| | | |||| ||||||||| ||||| || || | |||||||| | || || Sbjct 32109 GGTGAGCAAGGCGTAGGAGGCGATGTTGAAGGGCACGCCCAAGCCCATGTCGCAGGATCT 32168 Query 27294 CTGGTAGAGCTGACA-------CGAGAGCTCTCCA----TCG-----CTTACGTAAAACT 27337 |||||| | ||| || |||| ||| || ||| || ||||| |||| Sbjct 32169 CTGGTACATCTGGCAGCTGAGCCGAG-GCTTGCCCGATTTCGGGAAGCTCACGTAGAACT 32227 Query 27338 GACATATGGCGTGGCACGGAGGAAGAGCCATGAGGCCCAAGTCTTTGGGGTTCCAGGCGC 27397 | || | ||||||| || || | ||||| || | |||||||| ||| Sbjct 32228 GGCAGAACACGTGGCAGGGTGGCAAGGCCATCTCCTTGAACGCCGGCGGGTTCCACGCGG 32287 Query 27398 ACACGATGATGCGCCTGTCTTCTGGGTTGTTCCTGATGAGGTCCACGGCGTTTTGCAGCT 27457 ||| |||||| | ||||| | ||| || || | | || | | | |||| Sbjct 32288 ACATGATGATTCTTCTGTCATATGGATTTGTCTTCAACGTGTGTATGATGGACGCGAGCT 32347 Query 27458 GATCCACCCCCATCCCCGAGTAGTCTACC-CTCATGTCCGTGTACTCTGCTCCGAAATGC 27516 | || ||| || ||||||||| | | || ||| ||||||||||||| || || Sbjct 32348 GGTCGTAGCCCTGGCCAGAGTAGTCTGCGTCGCAA-TCCTTGTACTCTGCTCCAAAGTGT 32406 Query 27517 CTCCATTGGAACCCGTACACCGGTCCCAGGTCTCCCTCT-TCCCTGTGCTCGAAGCCCCT 27575 ||||| ||||| ||||| || || |||| ||| |||||| | | | | || |||||| Sbjct 32407 CTCCACTGGAAGCCGTAGACGGGACCCAAGTCGCCCTCTCTGCGGGAGGTC-AAGCCCAG 32465 Query 27576 CTTGTCCAAAAAGTCTCTGGAACCGTTGGCGTCCCAGATCTTTACCCCCTTCTCGGAGAG 27635 ||| | | || | || |||||| | |||||||| || || || || |||| || Sbjct 32466 GGAGTCGAGGTACTCCCGTGAGCCGTTGCCTTCCCAGATTTTGACGCCTTTTGCGGAAAG 32525 Query 27636 CTCTTTGGAGTTTGTGGACCCTCTGACGAACCACAGCAGCTCCTCCACGACGGCCTTCCA 27695 | || | || ||| || || || |||||||| || || | | || | ||||| Sbjct 32526 CAGCTTTGCGTCTGTCGAGCCGTGCACAAACCACAGGAGTTCGTGGAGGATGCCCTTCAT 32585 Query 27696 AAAGACCCTCTTGGTCGTGAGGAGGGGAAACTGTCCCTT----GAGGCCGTACCTGGCCT 27751 ||||| |||| || || | || || || |||||| | |||| || ||||| || Sbjct 32586 GAAGACTTTCTTTGTGGTCAACAGAGGGAA-TGTCCCATCTGAGAGGTCGAACCTGAGCT 32644 Query 27752 ---GAGAACCAAACACGGACAAGACTCCCGTGCCCGTCCTGTCT 27792 | | |||| | ||| | |||||||| ||||||||| Sbjct 32645 GTGGTGGCGCAAAAAGGGAGTACGTGCCCGTGCCAGTCCTGTCT 32688 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 369504849241382