Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pichia_20membranifaciens_20[genbank_20GCA_5F001950575.1_202016-12- 15] 522 sequences; 11,394,881 total letters Query= NC_031033.1 Length=217124 Score E Sequences producing significant alignments: (Bits) Value seq95 275 9e-69 seq30 196 7e-45 >seq95 Length=34527 Score = 275 bits (304), Expect = 9e-69 Identities = 1202/1876 (64%), Gaps = 47/1876 (3%) Strand=Plus/Minus Query 76775 ATCCAATGTAAACTGAATTGGAGAAGATGCGGGTTTTGTACGTAGATAGTACATACCAGT 76834 ||| | |||||| || || | | || |||| || || | || ||||||||||| || Sbjct 2600 ATCAACTGTAAATTGGATGGCGGCAGCAGCGGCTTGGGTTCTGAGGTAGTACATACCTGT 2541 Query 76835 TTTTAGACCCAGACTCCATCCGTAGAAATGCATGCTTGTCAGTTTGGA-ATAACTAGGAT 76893 || | ||| |||| |||||||| ||||| |||| ||| || | || | Sbjct 2540 CTTCAACCCCTTCTTCCAACCGTAGAAGTGCATCGAGGTCAACTTGCCCATGGTTGGGTT 2481 Query 76894 CGGCTATATGAATATTCATCGACTGACTTTGATCGATGAAAGCTCCTCTATCAGCCGCCA 76953 | | | || || ||||| |||||| || |||||| | || ||||| |||||||||| Sbjct 2480 CTTCAAG-TGGATGTTCATGGACTGAGACTGGTCGATGTACGCACCTCTGTCAGCCGCCA 2422 Query 76954 TTTTTATAATGGTCTTTTGAGGAATTTCCCAAATAGTTTTGAAAACTTGTTTGATATCAT 77013 | | || || | ||| || || || ||||| | || || | | | ||||| || | Sbjct 2421 TGTCGATGATCGCCTTCTGTGGGATCTCCCAGACGGTCTTATACAAGTCCTTGATTTCCT 2362 Query 77014 CTGGAAGGTTTGTA---TTTTGAATGGAACCACCATCTGATATAATTGTATTCTTTATAT 77070 ||| | ||||| | || || |||||||| || || || || ||||| ||| Sbjct 2361 GTGGGATGTTTGGAAGGTTCTGGATGGAACCGTTGTCGGAGATGATGTGGTTCTTCATAG 2302 Query 77071 CATCATTCCACAATTTCCTCTCTGTTAAAACTCTAAGGAGATGAGGATTAACTATTTGAA 77130 || ||||| | | | |||| || |||| | | | || || || || || | Sbjct 2301 AGTCGTTCCATAGTCCCATCTCCACCAAGTCTCTCAACATGTATGGGTTCACAATCTGGA 2242 Query 77131 ATTCTCCAGACAATACTCTACGAGTGTAAATATTACTGGTATATGGTTCCACAGATTCAT 77190 | || || | ||| ||||| | || ||| || || ||| ||||| || | | |||| | Sbjct 2241 ACTCACCGGCCAAAACTCTTCTAGAGTAGATGTTCGAGGTGTATGGCTCGAAACATTCGT 2182 Query 77191 TGTTTCCCAAAATTTGAGCAGTAGAAGCAGTTGGCATAGGTGCCACCAATAAACTATTTC 77250 ||| || | ||| || | || |||||||||||||| || || ||||| ||| |||| Sbjct 2181 TGTAACCAAGAATCTGCGAGGTGGAAGCAGTTGGCATTGGGGCAACCAACAAAGAGTTTC 2122 Query 77251 TGAGACCATGTGTTCTGATTTTATCTTTTAGATATTTCCAATCCCAAAGATCTGAAGGTA 77310 | | || || | |||||| || || || || | | ||| ||||| | || | ||| Sbjct 2121 TCAACCCGTGGGCTCTGATCTTCTCCTTCAGGGAATCCCAGTCCCATAAGTCGGTAGGCT 2062 Query 77311 CAACATCCCAAAGATCGTATTGTAGAATTCCGTTACTA-GCATATGATCCATTATATGTT 77369 | |||| || ||| | || || | || || | | || ||| || | ||| || Sbjct 2061 TCTTACCCCAGAGGTCGAACTGGAGCACACC-TTGCGATGCTGGTGAGCCCTCATAGGTC 2003 Query 77370 TCATAAGGTCCTTC--TGTTTCAGCTAGTTCACAACTCGCTTCCAATGCTCCGTAATAAA 77427 || || || || || || || || | || |||||| | ||| | | || | Sbjct 2002 TCGTAGGGACCCTCCTTGATT--GCCAACTCGACGGACGCTTCAAGTGCAGCATGGTAGA 1945 Query 77428 TTGTTTCGAAAATCTTCTTATTGAGATCTTGTGCTTCAATACTATCAAACGGATAATGTA 77487 ||||||||||||| | | || | || | ||| || | || || || | | | Sbjct 1944 TTGTTTCGAAAATTTGGATGTTCAACTCCTTTGCCTCTGGAGAGTCGAAAGGC-AGTCTG 1886 Query 77488 AA-AGAATAAAGGCATCTGCTAATCCCTGAACTCCAATACCAATAGGTCTATGTCTCTTA 77546 | || || || || || || || || || || |||| | |||| ||||| | |||| | Sbjct 1885 AGGAGCATGAAAGCGTCGGCCAAACCTTGGACACCAACAGCAATCGGTCTGTTTCTCATG 1826 Query 77547 TTGGAAATTTTAGCTTCTGGAATAGGATAATAATTAATGTCTATAATTTTATTGAGATTT 77606 || || | || || |||| |||||| ||||| | || || ||||| || | || Sbjct 1825 TTAGATCTCCGTGCCTCCGGAACAGGATAGTAATTGACATCGATGATTTTGTTCAAGTTC 1766 Query 77607 CTAACAACTACTTTAACCA---CGTCC--TTT-----AGTT-TA--AGAAAATCAAATCT 77653 | |||| || || | | ||| | ||| |||| || || || | ||| Sbjct 1765 TTGGCAACAACCTTGGCGATCTCGTGCAATTTCTCAAAGTTGTACCAGGAAGTGTGATCG 1706 Query 77654 TCCATCTATAACAAA--CATGTTCAAAGCTATAGATGCTAGATTACAAACTGCTACCTCA 77711 || ||| | |||| || | ||| || | || || | ||||| || || || ||| Sbjct 1705 TCACTCTCGA-CAAAGGCAGG--CAACGCAACCGAAGCCAAGTTACAGACAGCGACTTCA 1649 Query 77712 TTAGCGTTGGCA---TATTGTATTATCTCGGTACATAGATTACTACATTTGATAGTGCCC 77768 | |||| | | |||| | ||||| ||| | || | ||||||| | ||| Sbjct 1648 T---CGTTCGAAGAATATTCGACAATCTCACAACACAAGTTGGAAGATTTGATCATACCC 1592 Query 77769 AGATTTTGTTGGTTGCTCTTTTTATTGCATGAGTCCTTATAAAGAATAAACGGAGTCCCG 77828 | || ||||||||| ||| | || |||| |||||| || || || || ||||| || Sbjct 1591 AAGTTCTGTTGGTTGGATTTTGTGTTACATGCGTCCTTGTAGAGCATGAAAGGAGTACCC 1532 Query 77829 GTTTCAATCTGTGATTCGATAATAGATTTCCAGACGACTCTAG--CTTTTATCATAGATT 77886 |||||| | || | ||| | || || | ||| | ||| | | | || || | || Sbjct 1531 GTTTCAGTTTGGGCTTCCAAGATCGAGTACCACA--ACTTTTGTGCCTTGATGGTC--TT 1476 Query 77887 TGTATCGCC--TCTCTCTTTCATATTGAGTATATAGCCGTTCAAATTCATCTCCCCAAAC 77944 | || | | | |||||||| |||| ||||||||| ||| || || || || | || Sbjct 1475 TCTACCTCTGTTTTCTCTTTCGTATTTTGTATATAGCTCTTCGAACTCGTCACCGTAGAC 1416 Query 77945 ATCATCCAATCCAGGGCATTCATTTGGGCACATCAATGACCAGTCACCATCTTCCTTAAC 78004 || ||| || ||| ||| ||||| | | | | ||| || || | || ||| Sbjct 1415 GTCGGACAAGCCTGGGACCTCACTTGGGGAGAAAAGAGTCCATTCCTGATTCTGCTCAAC 1356 Query 78005 TCGTTTCATAAAGAGATCAGGTATCCATAGAGCAATAAATAGATCTCGGGTTCTATGTTC 78064 || ||||| || | ||||||||||| | ||| || | |||| || ||| ||| Sbjct 1355 TCTCTTCATGAACAAGTCAGGTATCCACAATGCAGGGAACAAGTCTCTGGCTCTGATTTC 1296 Query 78065 TTCATTTCCTGTATTCTTTTTAAGATCGAGAAACTCCATAATATCAGAATGCCATGGTTC 78124 ||| || || |||||| | | |||| || || | ||||| || |||||||| || Sbjct 1295 TTCCTTACCGTGGTTCTTTCTCACGTCGATGAAGTCGAAGATATCGGAGTGCCATGGCTC 1236 Query 78125 TAGATATATTGCCATAACTCCAGGTCGTTTATTACCTCCCTGATCTATATATCTGGCGGT 78184 ||||| | || | | || |||| ||| ||||| || || || | ||||||||| || Sbjct 1235 AAGATAGAGCGCAAAGGCACCTGGTCTTTTGTTACCACCTTGGTCGACATATCTGGCCGT 1176 Query 78185 GTTATTATAAACTCTCAACATTGGAATAATACCGTTAGATGTTCCATTTGTTCCAGAAAT 78244 ||| || |||| | || ||||||||| |||||||| || || || || || || | ||| Sbjct 1175 GTTGTTGAAAACACGCATCATTGGAATGATACCGTTGGAAGTACCGTTGGTACCTGCAAT 1116 Query 78245 ATAACTTCCACTTGCGCGAATATTACTAATGGATATCCCTATTCCTCCTGCCATCTTAGA 78304 || || | || | || || ||| | || || || ||||| |||| || Sbjct 1115 GTAGGAGCCTGTGGCTCTGATGTTGTGGATGTGCAAACCAATACCACCTGCGGTCTTGGA 1056 Query 78305 TATTAGAGCGCAACGTTTCAATGTATCGTAGATACCCTCTATACTGTCATCCATCA-TGT 78363 || || || || ||||||| || |||||||||||||| || ||||| || || Sbjct 1055 GATCAGCGCACACTGTTTCAAAGTGTCGTAGATACCCTCAATCGAATCATCTTGCATTGC 996 Query 78364 TAAGAAGAAAACAGCTAGACATTTGATGATGAACAGTTCCTGCATTAAATAATGTCGGAG 78423 | ||| |||||| ||||| || | || ||||| || || || || |||| Sbjct 995 GACCAAG-AAACAGGAGGACATCTGGTTTCTTGGGGTACCTGCGTTGAACAAGGTAGGAG 937 Query 78424 ATGCATGCGTAAACCATTTTTCAGAAAGTAGATTGTATGTTTCAATAGCTGATTCTATGT 78483 | || || || || || | | ||| | | ||||| || || || || || |||| Sbjct 936 AAGCGTGAGTGAAGTATCTCTTAGACATCAAGTTGTAGGTCTCGATGGCGCTCTCAATGT 877 Query 78484 CCCATTGATGAATTCCTACCGCTACACGCATCAACATATGCTGAGGTCTTTCAACCGTCT 78543 | ||||| || || || || | ||| | || ||||| |||||||| | ||| Sbjct 876 CGTCGCCGTGAATACCGACAGCGACTCTCATGATCAAGTGCTGGGGTCTTTCCGCAATCT 817 Query 78544 TATTATTTATTTTCAACAAGTATGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATG 78603 | || | | |||| | ||| ||| | || | || || || || || || ||||| Sbjct 816 TGCCATCCAATCTCAAAAGGTAGGATCTCTCGAGGGTCTTGAAGCCGAAGTAATTGTAGT 757 Query 78604 AAAAGTCTCTCTCGTA 78619 ||||| | ||||| Sbjct 756 TGAAGTCACGGTCGTA 741 >seq30 Length=26055 Score = 196 bits (216), Expect = 7e-45 Identities = 992/1557 (64%), Gaps = 47/1557 (3%) Strand=Plus/Plus Query 76776 TCCAATGTAAACTGAATTGGAGAAGATGCGGGTTTTGTACGTAGATAGTACATACCAGTT 76835 ||||| | |||||||||| |||| || | ||| || |||| |||||||||||| ||| Sbjct 1852 TCCAAACTGAACTGAATTGCTGAAGCAGCAGCTTTGGTTCGTAAATAGTACATACCTGTT 1911 Query 76836 TTTAGACCCAGACTCCATCCGTAGAAATGCATGCTTGTCAGTTTGGAATAACTAGGAT-C 76894 || || ||| |||| |||| ||||||||||| |||| ||| ||| | | || | Sbjct 1912 TTGAGTCCCTTCTTCCACGCGTAAAAATGCATGCTGGTCAATTTAGAAAAGGTGACATCC 1971 Query 76895 GGCTATATGAATATTCATCGACTGACTTTGATCGATGAAAGCTCCTCTATCAGCCGCCAT 76954 || | | || |||||| || |||||| | || | |||| || |||||||| Sbjct 1972 TGCAAGAACAA-ATTCATACTTTGTGATTGATCAACAAATGGGGCTCTGTCTGCCGCCAT 2030 Query 76955 TTTTATAATGGTCTTTTGAGGAATTTCCCAAATAGTTTTGAAAACTTGTTTGATATCATC 77014 | ||| || ||| |||| | |||||||| | ||||| | | |||||| ||| Sbjct 2031 ATCTATTATAGTCCTTTGTGATATTTCCCATACTGTTTTATACAACGCTTTGATTTCAGG 2090 Query 77015 TGGAAGG---TTTGTATTTTGAATGGAACCACCATCTGATATAATTGTATTCTTTATATC 77071 ||||| | ||| ||||||||||||| || ||| | ||||| |||| || ||||| Sbjct 2091 TGGAATGGCTTTTATATTTTGAATGGACCCGTCATTTTCGATAATATTATTTTTCATATC 2150 Query 77072 ATCATTCCA-----CAATTTCCTCTCTGTTAAAACTCTAAGGAGATGAGGATTAACTATT 77126 | | |||| ||| || || | | | ||||| | | ||| |||| | Sbjct 2151 AATACTCCATAAGCCAAGTTTAACTAAATCATCA-ACTAAGTATTT----ATTGACTACT 2205 Query 77127 TGAAATTCTCCAGACAATACTCTACGAGTGTAAATATTACTGGTATATGGTTCCACAGAT 77186 ||| |||||| || ||||||| ||| || ||||| ||| || || | || Sbjct 2206 TGATGTTCTCCTGATAATACTCGACGGACATATATATTGGATGTAATAGGCTCAAAGCAT 2265 Query 77187 TCATTGTTTCCCAAAATTTGAGCAGTAGAAGCAGTTGGCATAGGTGCCACCAATAAACTA 77246 |||||| || | |||||| | ||| || ||||||||||| || || | |||| Sbjct 2266 TCATTGAAACCGAGAATTTGGGAAGTTGATGCAGTTGGCATCAAGGCGACAAGTAAAGAG 2325 Query 77247 TTTCTGAGACCA---TGTGTTCTGATTTTATCTTTTAGATATTTCCAATCCCAAAGATCT 77303 ||||| | ||| ||| || || || | | | | | | ||||||||| | |||| Sbjct 2326 TTTCTCACGCCAAACTGTTTTATGGTT---TGTCTCAAAGTTGACCAATCCCATAAATCT 2382 Query 77304 GAAGGTACAACATCCCAAAGATCGTATTGTAGAATTCCGT---TACTAGCATATGATCCA 77360 ||||||| || | ||| | ||| |||| || | || | | | | | || ||| Sbjct 2383 GAAGGTATTACTTTCCACATATCAAATTGAAGCAAACCTTGTGAAATGGGA---GACCCA 2439 Query 77361 TTATATGTTTCATAAGGTCCTTCTG-TTTCAGCTAGTTCACAACTCGCTTCCAATGCTCC 77419 | || | || || | ||| || | ||| || | ||||| |||||| | | | Sbjct 2440 TCGTAAGATTGAT-ACTTCCCTCGGCTTTGTGCCAACTCACAGGATTGTTCCAAAGTTGC 2498 Query 77420 GTAATAAATTGTTTCGAAAATCTTCTTATTGAGATCTTGTGCTTCAATACTATCAAACGG 77479 | ||||| ||||| || || || | ||||| |||| | ||| | ||||||| Sbjct 2499 ATGGTAAATGGTTTCAAATATTTTAATGTTGAGCTCTTTCGACTCAGGAGATCCAAACGG 2558 Query 77480 ATAATGTAAAAGAATAAAGGCATCTGCTAATCCCTGAACTCCAATACCAATAGGTCTATG 77539 | | || | || || |||| || | ||| ||||| || | || || ||||| | Sbjct 2559 CATACGCAACATAAAGAAAACATCAGCAAGTCCTTGAACACCTAAGCCTATGGGTCTGTT 2618 Query 77540 TCTCTTATTGGAAATTTTAGCTTCTGGAATAGGATAATAATTAATGTCTATAATTTTATT 77599 | || ||| || ||| | | || ||||| | || || || || ||| ||| Sbjct 2619 TTTCAGATTCGATCTTTCGCAGTTTTCAAGTGGATACTTGTTGATATCAATGATTCTATC 2678 Query 77600 GAGATTTCTAACAACTACTTTAACCACGTCCTTTAGTTTAAGAAAATCAAATCTTCCA-T 77658 | ||| | ||| || || | || | ||||| ||||||| ||| |||||| | Sbjct 2679 CAAATTCCGGCAAACCACCTTGCATATTTCATGCAGTTTCAGAAAATTAAAACTTCCATT 2738 Query 77659 CTATAACAAACATGTTCAAAGCTATAGATGCTAGATTACAAACTGCTACCTCATTAGCGT 77718 || | ||| | | | | || | ||| || || |||||||| ||| |||| | Sbjct 2739 CTCAACAAAAGAAGGT-AGCGCCACAGAAGCAAGGTTACAAACCGCTGTTTCAT--CTTT 2795 Query 77719 TG--GCATATTGTATTATCTCGGTACATAGATTACTACATTTGATAGTGCCCAGATTTTG 77776 || | ||||| | |||||| ||| ||||| | |||||| ||| | |||| Sbjct 2796 TGACGAATATTCAACGATCTCGCAACAAAGATTCGAGCTTTTGATTACGCCTAAGTTTTT 2855 Query 77777 TTGGTTGCTCTTTTTATTGCATGAGTCCTTATAAAGAATAAACGGAGTCCCGGTTTCAAT 77836 || || | |||||| ||| || || || || | ||| || | || ||||| | Sbjct 2856 CTGATTTGACAATTTATTACATTGATCTTTGTATAGTAAAAATGGGTTTCCAGTTTCTGT 2915 Query 77837 CTGTGATTCGATAATAGATTTCCAGACGACTCTAGCTTTTATCATAGATTTGTATCGCCT 77896 ||||| | | || | | ||| | |||||||||| | | ||||| || Sbjct 2916 CTGTGCTGTCAGTATGGCATGCCACAATTCTCTAGCTTTGACTTTTTTCATGTATTTCCC 2975 Query 77897 CTCTCTTTCATATTGAGTATATAGCCGTTCAAATTCATCTCCCCAAACATCATCCAATCC 77956 |||| ||||||||| | |||||| | || ||||| || | || | || Sbjct 2976 CTCTTTTTCATATTTATCGTATAGCATGTTGAACTCATCACCGTATGATTCTGTAAGACC 3035 Query 77957 AGGGCATTCATTTGGGCACATCAATGACCAGTCACCATCTTCCTTAACTCGTTT-CATAA 78015 || |||| || ||| | | || |||| || | | | | || | || ||| ||||| Sbjct 3036 GGGACATTTATCTGGTGAAAATAAACACCACTC-CAAGTTGCGTTCAATCTTTTGCATAA 3094 Query 78016 AGAGATCAGGTATCCATAGAGCAATAAATAGATCTCGGGTTCTATGTTCTTCATTTCCTG 78075 ||||||| ||||||||||| || | || | ||| | ||| ||| || || || Sbjct 3095 AGAGATCGGGTATCCATAGCGCTAAGAACAAGCCTCTAGCTCTCATTTCCTCCTTACCGT 3154 Query 78076 TATTCTTTTTAAGATCGAGAAACTCCATAATATCAGAATGCCATGGTTCTAGATATATTG 78135 || ||| | | ||| | ||| || | || ||| |||||| || |||| |||||| Sbjct 3155 GGTTTTTTCTCAAATCCAAAAATTCGAAAACATCGCTATGCCAAGGCTCTAAATATAT-- 3212 Query 78136 CCATAA--CTCCAGGTCGTTTATTACCTCCCTGATCTATATATCTGGCGGTGTTATTATA 78193 || || |||| || | ||| || || || ||||| | |||| |||||||| | | | Sbjct 3213 ACAGAATGCTCCTGGCCTTTTGTTGCCGCCTTGATCGACATATTTGGCGGTGGATTCAAA 3272 Query 78194 AACTCTCAACATTGGAA-TAATACCGTTAGATGTTCCATTTGTTCCAGAAATATAACTTC 78252 ||| | | || |||| |||| ||| ||| | || |||| || |||||| | Sbjct 3273 CACTTTTAGCAGAGGAACTAAT-CCGGAAGAGATACCGTTTGAACCTCGGATATAAGACC 3331 Query 78253 CACTTGCGCGAATATT--ACTAATGGATATCCCTATTCCTCCTGCCATCTTAGATAT 78307 | || | || ||||| || ||| | | ||||| ||||| || ||| ||||| Sbjct 3332 CGCTGGAACGGATATTCGACAGATGCAAA--CCTATCCCTCCAGCACACTTGGATAT 3386 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 694664267286080