Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pichia_20membranifaciens_20[genbank_20GCA_5F001950575.1_202016-12- 15] 522 sequences; 11,394,881 total letters Query= NC_031465.1 Length=360610 Score E Sequences producing significant alignments: (Bits) Value seq97 140 7e-28 seq138 127 5e-24 seq468 96.9 8e-15 >seq97 Length=66064 Score = 140 bits (154), Expect = 7e-28 Identities = 159/212 (75%), Gaps = 1/212 (0%) Strand=Plus/Minus Query 151897 CAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTA 151956 |||| || | ||| || || |||||||||||||| |||| ||||||||| |||||||| | Sbjct 5452 CAAG-TGCAAAGTGGATTCCTTTTGGATGTTGTAGTCGGATAAAGTTCTACCATCTTCCA 5394 Query 151957 GGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAA 152016 || || |||||||| | || |||||||| | | || |||||||| ||||| | Sbjct 5393 ATTGCTTACCAGCGAAGATCAATCTTTGCTGGTCAGGTGGAATACCTTCCTTGTCTTGGA 5334 Query 152017 TTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGC 152076 ||||||| |||||| | || | |||| ||| ||| || ||||| |||||||| || | Sbjct 5333 TTTTTTGCTTGACATTGTCAATAGTGTCGGAAGACTCAACCTCAAGGGTAATAGTCTTAC 5274 Query 152077 CCGTGAGAGTCTTCACGAAGACCTGCATTTTA 152108 | || || || || ||||| | ||||| ||| Sbjct 5273 CGGTAAGGGTTTTGACGAAAATTTGCATCTTA 5242 >seq138 Length=17849 Score = 127 bits (140), Expect = 5e-24 Identities = 148/200 (74%), Gaps = 0/200 (0%) Strand=Plus/Minus Query 151908 GTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTAGGCTTTTCCCG 151967 || || ||||||||||||||||| |||| |||||||| |||||||||| || ||| Sbjct 9697 GTTGATTCTTTTTGGATGTTGTAGTCGGACAAAGTTCTACCATCTTCTAATTGCTTACCG 9638 Query 151968 GCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAATTTTTTGTTTG 152027 || || ||||| || |||||||| | | ||| |||||||| ||||| || ||||| ||| Sbjct 9637 GCAAAAATAAGTCTTTGCTGGTCAGGTGGGATACCTTCCTTATCTTGGATCTTTTGCTTG 9578 Query 152028 ACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGCCCGTGAGAGTC 152087 ||| | || | |||| ||| || ||||| | ||||| || || || || | ||| Sbjct 9577 ACATTATCGATAGTGTCAGAAGATTCGACTTCCAAGGTAATGGTCTTACCAGTTAAGGTC 9518 Query 152088 TTCACGAAGACCTGCATTTT 152107 || || || | ||||| || Sbjct 9517 TTGACAAAAATTTGCATCTT 9498 >seq468 Length=160 Score = 96.9 bits (106), Expect = 8e-15 Identities = 102/133 (77%), Gaps = 1/133 (1%) Strand=Plus/Minus Query 151897 CAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTA 151956 |||| || | ||| || || |||||||||||||| || | || ||||| || ||||||| Sbjct 138 CAAG-TGCAAAGTCGATTCCTTTTGGATGTTGTAGTCAGACAAGGTTCTTCCGTCTTCTA 80 Query 151957 GGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAA 152016 | ||| || ||||| ||||| ||||||||||| | | || |||||||| || || | Sbjct 79 GTTGTTTACCAGCGAAAATAAGTCTCTGCTGGTCTGGTGGAATACCTTCCTTGTCCTGGA 20 Query 152017 TTTTTTGTTTGAC 152029 | ||||| ||||| Sbjct 19 TCTTTTGCTTGAC 7 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1153813083102262